RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
RPUSD4-207ENST00000532800 HABP4Q5JVS0 413 aaKnown RBP21■□□□□ 0.95
RPUSD4-207ENST00000532800 TTC39AQ5SRH9 613 aa21■□□□□ 0.95
RPUSD4-207ENST00000532800 TREML2Q5T2D2 321 aa21■□□□□ 0.95
RPUSD4-207ENST00000532800 GPR108Q9NPR9 543 aa21■□□□□ 0.95
RPUSD4-207ENST00000532800 AGTPBP1Q9UPW5 1226 aa21■□□□□ 0.95
RPUSD4-207ENST00000532800 FOCADQ5VW36 1801 aa20.99■□□□□ 0.95
RPUSD4-207ENST00000532800 ATP8B2P98198 1209 aa20.99■□□□□ 0.95
RPUSD4-207ENST00000532800 HNRNPUQ00839 825 aaKnown RBP eCLIP20.99■□□□□ 0.95
RPUSD4-207ENST00000532800 SMCR8Q8TEV9 937 aaPredicted RBP20.99■□□□□ 0.95
RPUSD4-207ENST00000532800 AATFQ9NY61 560 aaKnown RBP eCLIP20.99■□□□□ 0.95
RPUSD4-207ENST00000532800 PCDH10Q9P2E7 1040 aa20.99■□□□□ 0.95
RPUSD4-207ENST00000532800 SURF6O75683 361 aaKnown RBP20.98■□□□□ 0.95
RPUSD4-207ENST00000532800 RLBP1P12271 317 aa20.98■□□□□ 0.95
RPUSD4-207ENST00000532800 CCL5P13501 91 aa20.98■□□□□ 0.95
RPUSD4-207ENST00000532800 SPP2Q13103 211 aa20.98■□□□□ 0.95
RPUSD4-207ENST00000532800 NAA16Q6N069 864 aaPredicted RBP20.98■□□□□ 0.95
RPUSD4-207ENST00000532800 ADGRA1Q86SQ6 560 aa20.98■□□□□ 0.95
RPUSD4-207ENST00000532800 BIN2Q9UBW5 565 aaPredicted RBP20.98■□□□□ 0.95
RPUSD4-207ENST00000532800 DOCK3Q8IZD9 2030 aa20.98■□□□□ 0.95
RPUSD4-207ENST00000532800 CYP2E1P05181 493 aaPredicted RBP20.97■□□□□ 0.95
RPUSD4-207ENST00000532800 CAP2P40123 477 aa20.97■□□□□ 0.95
RPUSD4-207ENST00000532800 CCDC158Q5M9N0 1113 aa20.97■□□□□ 0.95
RPUSD4-207ENST00000532800 ITPRIPQ8IWB1 547 aa20.97■□□□□ 0.95
RPUSD4-207ENST00000532800 FTSJ3Q8IY81 847 aaKnown RBP20.97■□□□□ 0.95
RPUSD4-207ENST00000532800 ANKRD13CQ8N6S4 541 aa20.97■□□□□ 0.95
RPUSD4-207ENST00000532800 NOL10Q9BSC4 688 aaKnown RBP20.97■□□□□ 0.95
RPUSD4-207ENST00000532800 TLR7Q9NYK1 1049 aaKnown RBP20.97■□□□□ 0.95
RPUSD4-207ENST00000532800 CEP290O15078 2479 aa20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 TNPO2O14787 897 aaKnown RBP20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 ZAP70P43403 619 aa20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 FLT3LGP49771 235 aa20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 HMGCS2P54868 508 aa20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 MAPKAPK5Q8IW41 473 aa20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 ZNF280CQ8ND82 737 aa20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 SLAIN1Q8ND83 568 aa20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 RNF208Q9H0X6 261 aa20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 DBNLQ9UJU6 430 aaKnown RBP20.96■□□□□ 0.95
RPUSD4-207ENST00000532800 GJB1P08034 283 aa20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 ELNP15502 786 aa20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 GJA8P48165 433 aa20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 UBXN2AP68543 259 aa20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 PROCA1Q8NCQ7 364 aaPredicted RBP20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 TGFBRAP1Q8WUH2 860 aa20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 UNC93B1Q9H1C4 597 aa20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 DNAJC18Q9H819 358 aa20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 PIH1D3Q9NQM4 214 aaKnown RBP20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 HERC5Q9UII4 1024 aaKnown RBP20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 FLT1P17948 1338 aa20.95■□□□□ 0.94
RPUSD4-207ENST00000532800 USP17L5A8MUK1 530 aa20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 ZBTB7BO15156 539 aaPredicted RBP20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 ADCY3O60266 1144 aa20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 BAG3O95817 575 aa20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 SHROOM1Q2M3G4 852 aaPredicted RBP20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 MIER1Q8N108 512 aa20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 CCDC8Q9H0W5 538 aaPredicted RBP20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 PI4KBQ9UBF8 816 aa20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 PNMA3Q9UL41 463 aa20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 NOP58Q9Y2X3 529 aaKnown RBP20.94■□□□□ 0.94
RPUSD4-207ENST00000532800 H0YGN5 161 aa20.93■□□□□ 0.94
RPUSD4-207ENST00000532800 PPP4CP60510 307 aa20.93■□□□□ 0.94
RPUSD4-207ENST00000532800 JAG1P78504 1218 aa20.93■□□□□ 0.94
RPUSD4-207ENST00000532800 FAM110CQ1W6H9 321 aa20.93■□□□□ 0.94
RPUSD4-207ENST00000532800 NKX2-3Q8TAU0 364 aa20.93■□□□□ 0.94
RPUSD4-207ENST00000532800 ZNF512BQ96KM6 892 aaPredicted RBP20.93■□□□□ 0.94
RPUSD4-207ENST00000532800 COLQQ9Y215 455 aaPredicted RBP20.93■□□□□ 0.94
RPUSD4-207ENST00000532800 INHAP05111 366 aa20.92■□□□□ 0.94
RPUSD4-207ENST00000532800 PLCG2P16885 1265 aa20.92■□□□□ 0.94
RPUSD4-207ENST00000532800 DYNLL1P63167 89 aaKnown RBP20.92■□□□□ 0.94
RPUSD4-207ENST00000532800 UBE2Q1Q7Z7E8 422 aa20.92■□□□□ 0.94
RPUSD4-207ENST00000532800 EAF2Q96CJ1 260 aaPredicted RBP20.92■□□□□ 0.94
RPUSD4-207ENST00000532800 TBC1D2Q9BYX2 928 aa20.92■□□□□ 0.94
RPUSD4-207ENST00000532800 DHX36Q9H2U1 1008 aaKnown RBP20.92■□□□□ 0.94
RPUSD4-207ENST00000532800 TAOK2Q9UL54 1235 aa20.92■□□□□ 0.94
RPUSD4-207ENST00000532800 IRF5Q13568 498 aa20.91■□□□□ 0.94
RPUSD4-207ENST00000532800 MTMR2Q13614 643 aa20.91■□□□□ 0.94
RPUSD4-207ENST00000532800 SH3D19Q5HYK7 790 aa20.91■□□□□ 0.94
RPUSD4-207ENST00000532800 U2AF1L4Q8WU68 220 aaKnown RBP20.91■□□□□ 0.94
RPUSD4-207ENST00000532800 ASCC2Q9H1I8 757 aaPredicted RBP20.91■□□□□ 0.94
RPUSD4-207ENST00000532800 SAP30BPQ9UHR5 308 aaKnown RBP20.91■□□□□ 0.94
RPUSD4-207ENST00000532800 PALD1Q9ULE6 856 aa20.91■□□□□ 0.94
RPUSD4-207ENST00000532800 NDUFB9Q9Y6M9 179 aa20.91■□□□□ 0.94
RPUSD4-207ENST00000532800 GDF11O95390 407 aa20.9■□□□□ 0.94
RPUSD4-207ENST00000532800 CEP85Q6P2H3 762 aa20.9■□□□□ 0.94
RPUSD4-207ENST00000532800 PXYLP1Q8TE99 480 aa20.9■□□□□ 0.94
RPUSD4-207ENST00000532800 AS3MTQ9HBK9 375 aa20.9■□□□□ 0.94
RPUSD4-207ENST00000532800 MYH1P12882 1939 aa20.9■□□□□ 0.94
RPUSD4-207ENST00000532800 CYP7A1P22680 504 aa20.89■□□□□ 0.93
RPUSD4-207ENST00000532800 FXR1P51114 621 aaKnown RBP eCLIP20.89■□□□□ 0.93
RPUSD4-207ENST00000532800 METTL16Q86W50 562 aaKnown RBP20.89■□□□□ 0.93
RPUSD4-207ENST00000532800 CRACR2BQ8N4Y2 399 aaPredicted RBP20.89■□□□□ 0.93
RPUSD4-207ENST00000532800 DPF3Q92784 378 aa20.89■□□□□ 0.93
RPUSD4-207ENST00000532800 COA7Q96BR5 231 aa20.89■□□□□ 0.93
RPUSD4-207ENST00000532800 WDR18Q9BV38 432 aa20.89■□□□□ 0.93
RPUSD4-207ENST00000532800 PLXNB2O15031 1838 aa20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 IDH1O75874 414 aaKnown RBP20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 FARP2O94887 1054 aaPredicted RBP20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 SGPL1O95470 568 aa20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 ASNSP08243 561 aa20.88■□□□□ 0.93
RPUSD4-207ENST00000532800 GCLCP48506 637 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms