RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CPA4Q9UI42 421 aa21.77■■□□□ 1.08
SMG1-203ENST00000532700 PTPN22Q9Y2R2 807 aa21.77■■□□□ 1.08
SMG1-203ENST00000532700 A0A0G2JLL6 359 aaPredicted RBP21.76■■□□□ 1.07
SMG1-203ENST00000532700 MGAMO43451 1857 aa21.76■■□□□ 1.07
SMG1-203ENST00000532700 MLLT1Q03111 559 aaPredicted RBP21.76■■□□□ 1.07
SMG1-203ENST00000532700 PRRT2Q7Z6L0 340 aaPredicted RBP21.76■■□□□ 1.07
SMG1-203ENST00000532700 MAGEB6Q8N7X4 407 aa21.76■■□□□ 1.07
SMG1-203ENST00000532700 NAV1Q8NEY1 1877 aa21.76■■□□□ 1.07
SMG1-203ENST00000532700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.76■■□□□ 1.07
SMG1-203ENST00000532700 SAP30BPQ9UHR5 308 aaKnown RBP21.76■■□□□ 1.07
SMG1-203ENST00000532700 RBBP6Q7Z6E9 1792 aaKnown RBP21.76■■□□□ 1.07
SMG1-203ENST00000532700 CENPFP49454 3210 aa21.76■■□□□ 1.07
SMG1-203ENST00000532700 TBC1D12O60347 775 aa21.75■■□□□ 1.07
SMG1-203ENST00000532700 CTNND1O60716 968 aaKnown RBP21.75■■□□□ 1.07
SMG1-203ENST00000532700 CYP2C8P10632 490 aa21.75■■□□□ 1.07
SMG1-203ENST00000532700 SLFNL1Q499Z3 407 aa21.75■■□□□ 1.07
SMG1-203ENST00000532700 C17orf99Q6UX52 265 aa21.75■■□□□ 1.07
SMG1-203ENST00000532700 EFCC1Q9HA90 598 aa21.75■■□□□ 1.07
SMG1-203ENST00000532700 PALD1Q9ULE6 856 aa21.75■■□□□ 1.07
SMG1-203ENST00000532700 TRIM75PA6NK02 468 aa21.74■■□□□ 1.07
SMG1-203ENST00000532700 MAP4K4O95819 1239 aaPredicted RBP21.74■■□□□ 1.07
SMG1-203ENST00000532700 CHGBP05060 677 aa21.74■■□□□ 1.07
SMG1-203ENST00000532700 EVX2Q03828 476 aa21.74■■□□□ 1.07
SMG1-203ENST00000532700 PDE3AQ14432 1141 aa21.74■■□□□ 1.07
SMG1-203ENST00000532700 KIF1BPQ96EK5 621 aa21.74■■□□□ 1.07
SMG1-203ENST00000532700 ZCCHC17Q9NP64 241 aaKnown RBP21.74■■□□□ 1.07
SMG1-203ENST00000532700 PICK1Q9NRD5 415 aa21.74■■□□□ 1.07
SMG1-203ENST00000532700 CXCL11O14625 94 aa21.73■■□□□ 1.07
SMG1-203ENST00000532700 SMARCA5O60264 1052 aaPredicted RBP21.73■■□□□ 1.07
SMG1-203ENST00000532700 LACTBP83111 547 aaPredicted RBP21.73■■□□□ 1.07
SMG1-203ENST00000532700 PTCH2Q9Y6C5 1203 aa21.73■■□□□ 1.07
SMG1-203ENST00000532700 BAG3O95817 575 aa21.72■■□□□ 1.07
SMG1-203ENST00000532700 HSP90AB4PQ58FF6 505 aa21.72■■□□□ 1.07
SMG1-203ENST00000532700 TREML2Q5T2D2 321 aa21.72■■□□□ 1.07
SMG1-203ENST00000532700 GADL1Q6ZQY3 521 aa21.72■■□□□ 1.07
SMG1-203ENST00000532700 NOL10Q9BSC4 688 aaKnown RBP21.72■■□□□ 1.07
SMG1-203ENST00000532700 MYH7P12883 1935 aa21.72■■□□□ 1.07
SMG1-203ENST00000532700 POTEFA5A3E0 1075 aa21.71■■□□□ 1.07
SMG1-203ENST00000532700 HMMRO75330 724 aa21.71■■□□□ 1.07
SMG1-203ENST00000532700 CAP2P40123 477 aa21.71■■□□□ 1.07
SMG1-203ENST00000532700 CLASRPQ8N2M8 674 aaKnown RBP21.71■■□□□ 1.07
SMG1-203ENST00000532700 YTHDC1Q96MU7 727 aaKnown RBP21.71■■□□□ 1.07
SMG1-203ENST00000532700 DNAJC2Q99543 621 aaKnown RBP21.71■■□□□ 1.07
SMG1-203ENST00000532700 RIOK1Q9BRS2 568 aaKnown RBP21.71■■□□□ 1.07
SMG1-203ENST00000532700 BRCA2P51587 3418 aa21.71■■□□□ 1.07
SMG1-203ENST00000532700 GOLIM4O00461 696 aa21.7■■□□□ 1.06
SMG1-203ENST00000532700 METTL16Q86W50 562 aaKnown RBP21.7■■□□□ 1.06
SMG1-203ENST00000532700 TRIM47Q96LD4 638 aa21.7■■□□□ 1.06
SMG1-203ENST00000532700 TCRBV5S4A2TA0A5A2 114 aa21.69■■□□□ 1.06
SMG1-203ENST00000532700 GDF11O95390 407 aa21.69■■□□□ 1.06
SMG1-203ENST00000532700 BCRP11274 1271 aa21.69■■□□□ 1.06
SMG1-203ENST00000532700 PDE6AP16499 860 aa21.69■■□□□ 1.06
SMG1-203ENST00000532700 PLCG2P16885 1265 aa21.69■■□□□ 1.06
SMG1-203ENST00000532700 RAB11FIP3O75154 756 aa21.68■■□□□ 1.06
SMG1-203ENST00000532700 IFIT2P09913 472 aaKnown RBP21.68■■□□□ 1.06
SMG1-203ENST00000532700 SPP2Q13103 211 aa21.68■■□□□ 1.06
SMG1-203ENST00000532700 PI4KBQ9UBF8 816 aa21.68■■□□□ 1.06
SMG1-203ENST00000532700 HERC5Q9UII4 1024 aaKnown RBP21.68■■□□□ 1.06
SMG1-203ENST00000532700 BAZ2AQ9UIF9 1905 aaKnown RBP21.67■■□□□ 1.06
SMG1-203ENST00000532700 ZNF532Q9HCE3 1301 aa21.67■■□□□ 1.06
SMG1-203ENST00000532700 MAP3K12Q12852 859 aa21.67■■□□□ 1.06
SMG1-203ENST00000532700 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.67■■□□□ 1.06
SMG1-203ENST00000532700 ARMC5Q96C12 935 aa21.67■■□□□ 1.06
SMG1-203ENST00000532700 DHX36Q9H2U1 1008 aaKnown RBP21.67■■□□□ 1.06
SMG1-203ENST00000532700 BOLA2Q9H3K6 86 aa21.67■■□□□ 1.06
SMG1-203ENST00000532700 HMGCS2P54868 508 aa21.66■■□□□ 1.06
SMG1-203ENST00000532700 SH3TC2Q8TF17 1288 aa21.66■■□□□ 1.06
SMG1-203ENST00000532700 PARK7Q99497 189 aaKnown RBP21.66■■□□□ 1.06
SMG1-203ENST00000532700 PCDHB15Q9Y5E8 787 aa21.66■■□□□ 1.06
SMG1-203ENST00000532700 SMIM22K7EJ46 135 aa21.65■■□□□ 1.06
SMG1-203ENST00000532700 PSMC4P43686 418 aa21.65■■□□□ 1.06
SMG1-203ENST00000532700 SLC9C2Q5TAH2 1124 aa21.65■■□□□ 1.06
SMG1-203ENST00000532700 TSHZ3Q63HK5 1081 aa21.65■■□□□ 1.06
SMG1-203ENST00000532700 FASTKD5Q7L8L6 764 aaKnown RBP21.65■■□□□ 1.06
SMG1-203ENST00000532700 LCORLQ8N3X6 602 aa21.65■■□□□ 1.06
SMG1-203ENST00000532700 ZNF280CQ8ND82 737 aa21.65■■□□□ 1.06
SMG1-203ENST00000532700 AGTPBP1Q9UPW5 1226 aa21.65■■□□□ 1.06
SMG1-203ENST00000532700 PEX10O60683 326 aa21.64■■□□□ 1.05
SMG1-203ENST00000532700 MYCP01106 439 aaPredicted RBP21.64■■□□□ 1.05
SMG1-203ENST00000532700 ATP5JP18859 108 aa21.64■■□□□ 1.05
SMG1-203ENST00000532700 OSBPP22059 807 aa21.64■■□□□ 1.05
SMG1-203ENST00000532700 USP5P45974 858 aa21.64■■□□□ 1.05
SMG1-203ENST00000532700 PLCD1P51178 756 aa21.64■■□□□ 1.05
SMG1-203ENST00000532700 ZNF333Q96JL9 665 aa21.64■■□□□ 1.05
SMG1-203ENST00000532700 PAG1Q9NWQ8 432 aa21.64■■□□□ 1.05
SMG1-203ENST00000532700 USP17L5A8MUK1 530 aa21.63■■□□□ 1.05
SMG1-203ENST00000532700 IGSF3O75054 1194 aa21.63■■□□□ 1.05
SMG1-203ENST00000532700 MTMR2Q13614 643 aa21.63■■□□□ 1.05
SMG1-203ENST00000532700 CRACR2BQ8N4Y2 399 aaPredicted RBP21.63■■□□□ 1.05
SMG1-203ENST00000532700 SDR42E1Q8WUS8 393 aa21.63■■□□□ 1.05
SMG1-203ENST00000532700 LRRCC1Q9C099 1032 aa21.63■■□□□ 1.05
SMG1-203ENST00000532700 ZBTB21Q9ULJ3 1066 aa21.63■■□□□ 1.05
SMG1-203ENST00000532700 PLXNB2O15031 1838 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 DOCK3Q8IZD9 2030 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 MAGEB6P1A0A0J9YX57 407 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 PRKAB2O43741 272 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 CYP2D6P10635 497 aa21.62■■□□□ 1.05
SMG1-203ENST00000532700 RRP1P56182 461 aaKnown RBP21.62■■□□□ 1.05
SMG1-203ENST00000532700 FOXP4Q8IVH2 680 aaPredicted RBP21.62■■□□□ 1.05
SMG1-203ENST00000532700 HAUS7Q99871 368 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms