RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 RHBDL3P58872 404 aa18.67■□□□□ 0.58
BRPF3-210ENST00000532538 SPP2Q13103 211 aa18.67■□□□□ 0.58
BRPF3-210ENST00000532538 CCDC158Q5M9N0 1113 aa18.67■□□□□ 0.58
BRPF3-210ENST00000532538 SNRKQ9NRH2 765 aa18.67■□□□□ 0.58
BRPF3-210ENST00000532538 AGTPBP1Q9UPW5 1226 aa18.67■□□□□ 0.58
BRPF3-210ENST00000532538 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.67■□□□□ 0.58
BRPF3-210ENST00000532538 TBC1D12O60347 775 aa18.66■□□□□ 0.58
BRPF3-210ENST00000532538 BAG3O95817 575 aa18.66■□□□□ 0.58
BRPF3-210ENST00000532538 MAP4K4O95819 1239 aaPredicted RBP18.66■□□□□ 0.58
BRPF3-210ENST00000532538 ELNP15502 786 aa18.66■□□□□ 0.58
BRPF3-210ENST00000532538 ARID4AP29374 1257 aaPredicted RBP18.66■□□□□ 0.58
BRPF3-210ENST00000532538 MCAMP43121 646 aa18.66■□□□□ 0.58
BRPF3-210ENST00000532538 MAP3K10Q02779 954 aa18.66■□□□□ 0.58
BRPF3-210ENST00000532538 PABPC4Q13310 644 aaKnown RBP eCLIP18.66■□□□□ 0.58
BRPF3-210ENST00000532538 NAA16Q6N069 864 aaPredicted RBP18.66■□□□□ 0.58
BRPF3-210ENST00000532538 SHISA4Q96DD7 197 aa18.66■□□□□ 0.58
BRPF3-210ENST00000532538 UNC93B1Q9H1C4 597 aa18.66■□□□□ 0.58
BRPF3-210ENST00000532538 AS3MTQ9HBK9 375 aa18.66■□□□□ 0.58
BRPF3-210ENST00000532538 MAST2Q6P0Q8 1798 aa18.65■□□□□ 0.58
BRPF3-210ENST00000532538 TFRCP02786 760 aaKnown RBP18.65■□□□□ 0.58
BRPF3-210ENST00000532538 HMGCS2P54868 508 aa18.65■□□□□ 0.58
BRPF3-210ENST00000532538 TREML2Q5T2D2 321 aa18.65■□□□□ 0.58
BRPF3-210ENST00000532538 ZKSCAN2Q63HK3 967 aa18.65■□□□□ 0.58
BRPF3-210ENST00000532538 ZNF280CQ8ND82 737 aa18.65■□□□□ 0.58
BRPF3-210ENST00000532538 SH3RF3Q8TEJ3 882 aaPredicted RBP18.65■□□□□ 0.58
BRPF3-210ENST00000532538 U2AF1L4Q8WU68 220 aaKnown RBP18.65■□□□□ 0.58
BRPF3-210ENST00000532538 AATFQ9NY61 560 aaKnown RBP eCLIP18.65■□□□□ 0.58
BRPF3-210ENST00000532538 MYH1P12882 1939 aa18.64■□□□□ 0.58
BRPF3-210ENST00000532538 LOC285556D6RIA3 1793 aa18.64■□□□□ 0.57
BRPF3-210ENST00000532538 USP17L5A8MUK1 530 aa18.64■□□□□ 0.57
BRPF3-210ENST00000532538 NPM3O75607 178 aaKnown RBP18.64■□□□□ 0.57
BRPF3-210ENST00000532538 FARP2O94887 1054 aaPredicted RBP18.64■□□□□ 0.57
BRPF3-210ENST00000532538 INHAP05111 366 aa18.64■□□□□ 0.57
BRPF3-210ENST00000532538 PLCG2P16885 1265 aa18.64■□□□□ 0.57
BRPF3-210ENST00000532538 CHRDL2Q6WN34 429 aa18.64■□□□□ 0.57
BRPF3-210ENST00000532538 FTSJ3Q8IY81 847 aaKnown RBP18.64■□□□□ 0.57
BRPF3-210ENST00000532538 CRACR2BQ8N4Y2 399 aaPredicted RBP18.64■□□□□ 0.57
BRPF3-210ENST00000532538 TMEM57Q8N5G2 664 aa18.64■□□□□ 0.57
BRPF3-210ENST00000532538 PROCA1Q8NCQ7 364 aaPredicted RBP18.64■□□□□ 0.57
BRPF3-210ENST00000532538 ZNF384Q8TF68 577 aa18.64■□□□□ 0.57
BRPF3-210ENST00000532538 TBC1D2Q9BYX2 928 aa18.64■□□□□ 0.57
BRPF3-210ENST00000532538 MKI67P46013 3256 aaKnown RBP18.63■□□□□ 0.57
BRPF3-210ENST00000532538 FOCADQ5VW36 1801 aa18.63■□□□□ 0.57
BRPF3-210ENST00000532538 SURF6O75683 361 aaKnown RBP18.63■□□□□ 0.57
BRPF3-210ENST00000532538 CAP2P40123 477 aa18.63■□□□□ 0.57
BRPF3-210ENST00000532538 FXR1P51114 621 aaKnown RBP eCLIP18.63■□□□□ 0.57
BRPF3-210ENST00000532538 TGFBRAP1Q8WUH2 860 aa18.63■□□□□ 0.57
BRPF3-210ENST00000532538 TMOD4Q9NZQ9 345 aa18.63■□□□□ 0.57
BRPF3-210ENST00000532538 PI4KBQ9UBF8 816 aa18.63■□□□□ 0.57
BRPF3-210ENST00000532538 NR2E3Q9Y5X4 410 aa18.63■□□□□ 0.57
BRPF3-210ENST00000532538 SGPL1O95470 568 aa18.62■□□□□ 0.57
BRPF3-210ENST00000532538 IRX3P78415 501 aaPredicted RBP18.62■□□□□ 0.57
BRPF3-210ENST00000532538 TNNI3KQ59H18 835 aa18.62■□□□□ 0.57
BRPF3-210ENST00000532538 MAPKAPK5Q8IW41 473 aa18.62■□□□□ 0.57
BRPF3-210ENST00000532538 PXYLP1Q8TE99 480 aa18.62■□□□□ 0.57
BRPF3-210ENST00000532538 DEFB118Q96PH6 123 aa18.62■□□□□ 0.57
BRPF3-210ENST00000532538 C1orf115Q9H7X2 142 aa18.62■□□□□ 0.57
BRPF3-210ENST00000532538 HERC5Q9UII4 1024 aaKnown RBP18.62■□□□□ 0.57
BRPF3-210ENST00000532538 FPGT-TNNI3KV9GXZ4 949 aa18.62■□□□□ 0.57
BRPF3-210ENST00000532538 BRCA2P51587 3418 aa18.61■□□□□ 0.57
BRPF3-210ENST00000532538 GCLCP48506 637 aaPredicted RBP18.61■□□□□ 0.57
BRPF3-210ENST00000532538 FAM110CQ1W6H9 321 aa18.61■□□□□ 0.57
BRPF3-210ENST00000532538 ITPRIPQ8IWB1 547 aa18.61■□□□□ 0.57
BRPF3-210ENST00000532538 DBNDD2Q9BQY9 259 aa18.61■□□□□ 0.57
BRPF3-210ENST00000532538 DHX36Q9H2U1 1008 aaKnown RBP18.61■□□□□ 0.57
BRPF3-210ENST00000532538 COL2A1P02458 1487 aaPredicted RBP18.6■□□□□ 0.57
BRPF3-210ENST00000532538 IRF5Q13568 498 aa18.6■□□□□ 0.57
BRPF3-210ENST00000532538 CCAR1Q8IX12 1150 aaKnown RBP18.6■□□□□ 0.57
BRPF3-210ENST00000532538 SIPA1L1O43166 1804 aa18.6■□□□□ 0.57
BRPF3-210ENST00000532538 EVI5O60447 810 aa18.59■□□□□ 0.57
BRPF3-210ENST00000532538 HLA-DOAP06340 250 aa18.59■□□□□ 0.57
BRPF3-210ENST00000532538 ATP8B2P98198 1209 aa18.59■□□□□ 0.57
BRPF3-210ENST00000532538 MTMR2Q13614 643 aa18.59■□□□□ 0.57
BRPF3-210ENST00000532538 ASCC2Q9H1I8 757 aaPredicted RBP18.59■□□□□ 0.57
BRPF3-210ENST00000532538 CWC22Q9HCG8 908 aaKnown RBP18.59■□□□□ 0.57
BRPF3-210ENST00000532538 GPR108Q9NPR9 543 aa18.59■□□□□ 0.57
BRPF3-210ENST00000532538 SAP30BPQ9UHR5 308 aaKnown RBP18.59■□□□□ 0.57
BRPF3-210ENST00000532538 ASNSP08243 561 aa18.58■□□□□ 0.56
BRPF3-210ENST00000532538 PALD1Q9ULE6 856 aa18.58■□□□□ 0.56
BRPF3-210ENST00000532538 CEP290O15078 2479 aa18.58■□□□□ 0.56
BRPF3-210ENST00000532538 IDH1O75874 414 aaKnown RBP18.57■□□□□ 0.56
BRPF3-210ENST00000532538 GDF11O95390 407 aa18.57■□□□□ 0.56
BRPF3-210ENST00000532538 CYP2E1P05181 493 aaPredicted RBP18.57■□□□□ 0.56
BRPF3-210ENST00000532538 CYP7A1P22680 504 aa18.57■□□□□ 0.56
BRPF3-210ENST00000532538 ZAP70P43403 619 aa18.57■□□□□ 0.56
BRPF3-210ENST00000532538 USP5P45974 858 aa18.57■□□□□ 0.56
BRPF3-210ENST00000532538 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.56
BRPF3-210ENST00000532538 RRP1BQ14684 758 aaKnown RBP18.57■□□□□ 0.56
BRPF3-210ENST00000532538 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
BRPF3-210ENST00000532538 CCDC8Q9H0W5 538 aaPredicted RBP18.57■□□□□ 0.56
BRPF3-210ENST00000532538 RBM27Q9P2N5 1060 aaKnown RBP18.57■□□□□ 0.56
BRPF3-210ENST00000532538 FLT1P17948 1338 aa18.56■□□□□ 0.56
BRPF3-210ENST00000532538 BACE1P56817 501 aa18.56■□□□□ 0.56
BRPF3-210ENST00000532538 POLA2Q14181 598 aa18.56■□□□□ 0.56
BRPF3-210ENST00000532538 SSH3Q8TE77 659 aa18.56■□□□□ 0.56
BRPF3-210ENST00000532538 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.56■□□□□ 0.56
BRPF3-210ENST00000532538 BCL11AQ9H165 835 aa18.56■□□□□ 0.56
BRPF3-210ENST00000532538 C19orf81C9J6K1 198 aa18.55■□□□□ 0.56
BRPF3-210ENST00000532538 USP17L10C9JJH3 530 aa18.55■□□□□ 0.56
BRPF3-210ENST00000532538 HMGCRP04035 888 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms