RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 SHTN1A0MZ66 631 aa25.93■■□□□ 1.74
PACSIN3-209ENST00000532457 POTECB2RU33 542 aa25.93■■□□□ 1.74
PACSIN3-209ENST00000532457 KDM4AO75164 1064 aa25.93■■□□□ 1.74
PACSIN3-209ENST00000532457 ST3GAL1Q11201 340 aa25.93■■□□□ 1.74
PACSIN3-209ENST00000532457 NFIAQ12857 509 aa25.93■■□□□ 1.74
PACSIN3-209ENST00000532457 DLGAP5Q15398 846 aa25.93■■□□□ 1.74
PACSIN3-209ENST00000532457 RRP12Q5JTH9 1297 aaKnown RBP25.93■■□□□ 1.74
PACSIN3-209ENST00000532457 TAF1DQ9H5J8 278 aaPredicted RBP25.93■■□□□ 1.74
PACSIN3-209ENST00000532457 PRDM1O75626 825 aa25.92■■□□□ 1.74
PACSIN3-209ENST00000532457 DDIT3P35638 169 aa25.92■■□□□ 1.74
PACSIN3-209ENST00000532457 CACNB3P54284 484 aa25.92■■□□□ 1.74
PACSIN3-209ENST00000532457 PICALMQ13492 652 aa25.92■■□□□ 1.74
PACSIN3-209ENST00000532457 USP50Q70EL3 339 aaPredicted RBP25.92■■□□□ 1.74
PACSIN3-209ENST00000532457 MTMR14Q8NCE2 650 aa25.92■■□□□ 1.74
PACSIN3-209ENST00000532457 DYNLL2Q96FJ2 89 aa25.92■■□□□ 1.74
PACSIN3-209ENST00000532457 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.92■■□□□ 1.74
PACSIN3-209ENST00000532457 ANKRD1Q15327 319 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 KIF4BQ2VIQ3 1234 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 RBM26Q5T8P6 1007 aaKnown RBP25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 SAMD7Q7Z3H4 446 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 ZFPM1Q8IX07 1006 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 FBXL16Q8N461 479 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 NECAB1Q8N987 351 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 NMRK2Q9NPI5 230 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 DTNBO60941 627 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 APOBRQ0VD83 1088 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 TBC1D10BQ4KMP7 808 aaPredicted RBP25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 TDRD3Q9H7E2 651 aaKnown RBP25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 CNNM2Q9H8M5 875 aa25.91■■□□□ 1.74
PACSIN3-209ENST00000532457 IGDCC4Q8TDY8 1250 aa25.9■■□□□ 1.74
PACSIN3-209ENST00000532457 KRT23Q9C075 422 aa25.9■■□□□ 1.74
PACSIN3-209ENST00000532457 RNF41Q9H4P4 317 aaPredicted RBP25.9■■□□□ 1.74
PACSIN3-209ENST00000532457 SENP2Q9HC62 589 aa25.9■■□□□ 1.74
PACSIN3-209ENST00000532457 TOMM22Q9NS69 142 aa25.9■■□□□ 1.74
PACSIN3-209ENST00000532457 FOCADQ5VW36 1801 aa25.9■■□□□ 1.74
PACSIN3-209ENST00000532457 MYO1BO43795 1136 aa25.89■■□□□ 1.74
PACSIN3-209ENST00000532457 POLR3DP05423 398 aaPredicted RBP25.89■■□□□ 1.74
PACSIN3-209ENST00000532457 HSP90AA1P07900 732 aaKnown RBP25.89■■□□□ 1.74
PACSIN3-209ENST00000532457 NAV1Q8NEY1 1877 aa25.89■■□□□ 1.74
PACSIN3-209ENST00000532457 ZSCAN31Q96LW9 406 aaPredicted RBP25.89■■□□□ 1.74
PACSIN3-209ENST00000532457 WDR19Q8NEZ3 1342 aa25.89■■□□□ 1.73
PACSIN3-209ENST00000532457 FAM198AQ9UFP1 575 aa25.88■■□□□ 1.73
PACSIN3-209ENST00000532457 LAMB1P07942 1786 aa25.88■■□□□ 1.73
PACSIN3-209ENST00000532457 FGD1P98174 961 aa25.88■■□□□ 1.73
PACSIN3-209ENST00000532457 BRPF3Q9ULD4 1205 aa25.88■■□□□ 1.73
PACSIN3-209ENST00000532457 DDX60LQ5H9U9 1706 aaKnown RBP25.88■■□□□ 1.73
PACSIN3-209ENST00000532457 ECM29Q5VYK3 1845 aa25.87■■□□□ 1.73
PACSIN3-209ENST00000532457 MYH1P12882 1939 aa25.87■■□□□ 1.73
PACSIN3-209ENST00000532457 SPDYE2BA6NHP3 402 aa25.87■■□□□ 1.73
PACSIN3-209ENST00000532457 WNT10BO00744 389 aa25.87■■□□□ 1.73
PACSIN3-209ENST00000532457 SPDYE6P0CI01 402 aa25.87■■□□□ 1.73
PACSIN3-209ENST00000532457 SLC44A5Q8NCS7 719 aa25.87■■□□□ 1.73
PACSIN3-209ENST00000532457 TRPM4Q8TD43 1214 aa25.87■■□□□ 1.73
PACSIN3-209ENST00000532457 ZKSCAN3Q9BRR0 538 aa25.87■■□□□ 1.73
PACSIN3-209ENST00000532457 ORC4O43929 436 aa25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 STK3Q13188 491 aa25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 EAPPQ56P03 285 aaPredicted RBP25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 CCDC83Q8IWF9 413 aa25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 ZNF784Q8NCA9 323 aaPredicted RBP25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 IDI2Q9BXS1 227 aa25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 SH2B1Q9NRF2 756 aaPredicted RBP25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 SH2B2O14492 632 aaPredicted RBP25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 EGFRP00533 1210 aa25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 EVCP57679 992 aa25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 ZC3H15Q8WU90 426 aaKnown RBP25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 ZBED3Q96IU2 234 aaPredicted RBP25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 OSBPL5Q9H0X9 879 aaPredicted RBP25.86■■□□□ 1.73
PACSIN3-209ENST00000532457 TCP10Q12799 353 aa25.85■■□□□ 1.73
PACSIN3-209ENST00000532457 ROBO3Q96MS0 1386 aa25.85■■□□□ 1.73
PACSIN3-209ENST00000532457 RANBP6O60518 1105 aaKnown RBP25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 SLURP2P0DP57 97 aa25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 PCP11498 1178 aaKnown RBP25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 NBPF9Q3BBW0 867 aa25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 FAM47AQ5JRC9 791 aa25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 SH3BP5LQ7L8J4 393 aa25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 ESR2Q92731 530 aa25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 INTS4Q96HW7 963 aaKnown RBP25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 LY9Q9HBG7 655 aa25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 SLC3A2P08195 630 aaKnown RBP25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 PDIA3P30101 505 aaKnown RBP25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 HIRAP54198 1017 aaPredicted RBP25.84■■□□□ 1.73
PACSIN3-209ENST00000532457 PDE4BQ07343 736 aa25.83■■□□□ 1.73
PACSIN3-209ENST00000532457 TMEM87BQ96K49 555 aa25.83■■□□□ 1.73
PACSIN3-209ENST00000532457 ANGEL1Q9UNK9 670 aaKnown RBP25.83■■□□□ 1.73
PACSIN3-209ENST00000532457 CLRN2A0PK11 232 aa25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 IFIT3O14879 490 aaKnown RBP25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 CDK8P49336 464 aa25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 TMEM67Q5HYA8 995 aa25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 C16orf86Q6ZW13 317 aa25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 AMOTL1Q8IY63 956 aa25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 TMOD2Q9NZR1 351 aa25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 ZNF70Q9UC06 446 aaPredicted RBP25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 CLEC11AQ9Y240 323 aa25.82■■□□□ 1.72
PACSIN3-209ENST00000532457 DDTLA6NHG4 134 aaPredicted RBP25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 PFKFB2O60825 505 aa25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 SCRN1Q12765 414 aa25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 ZNF274Q96GC6 653 aaPredicted RBP25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 HPS5Q9UPZ3 1129 aa25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 NMT2O60551 498 aa25.81■■□□□ 1.72
PACSIN3-209ENST00000532457 GABPAQ06546 454 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms