RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 STRBPQ96SI9 672 aaKnown RBP15□□□□□ -0.01
COPB1-208ENST00000532088 ESYT1Q9BSJ8 1104 aa15□□□□□ -0.01
COPB1-208ENST00000532088 IDI2Q9BXS1 227 aa15□□□□□ -0.01
COPB1-208ENST00000532088 TAF1DQ9H5J8 278 aaPredicted RBP15□□□□□ -0.01
COPB1-208ENST00000532088 AATFQ9NY61 560 aaKnown RBP eCLIP15□□□□□ -0.01
COPB1-208ENST00000532088 ADAMTSL1Q8N6G6 1762 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 SHTN1A0MZ66 631 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 M0R2C6 588 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 MBD4O95243 580 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 EMP3P54852 163 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 TBC1D10BQ4KMP7 808 aaPredicted RBP14.99□□□□□ -0.01
COPB1-208ENST00000532088 CDC42EP5Q6NZY7 148 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 GIMAP6Q6P9H5 292 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 SAMD7Q7Z3H4 446 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 MIGA1Q8NAN2 632 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 ZDHHC16Q969W1 377 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 CRNKL1Q9BZJ0 848 aaKnown RBP14.99□□□□□ -0.01
COPB1-208ENST00000532088 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 PGAP2Q9UHJ9 254 aa14.99□□□□□ -0.01
COPB1-208ENST00000532088 COL2A1P02458 1487 aaPredicted RBP14.98□□□□□ -0.01
COPB1-208ENST00000532088 SLFNL1Q499Z3 407 aa14.98□□□□□ -0.01
COPB1-208ENST00000532088 LCORLQ8N3X6 602 aa14.98□□□□□ -0.01
COPB1-208ENST00000532088 TRPM4Q8TD43 1214 aa14.98□□□□□ -0.01
COPB1-208ENST00000532088 SEC62Q99442 399 aaKnown RBP14.98□□□□□ -0.01
COPB1-208ENST00000532088 ATP8A2Q9NTI2 1148 aa14.98□□□□□ -0.01
COPB1-208ENST00000532088 USP40Q9NVE5 1235 aa14.98□□□□□ -0.01
COPB1-208ENST00000532088 ZNF70Q9UC06 446 aaPredicted RBP14.98□□□□□ -0.01
COPB1-208ENST00000532088 ZMYM6O95789 1325 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 PATL2C9JE40 543 aaKnown RBP14.97□□□□□ -0.01
COPB1-208ENST00000532088 ENTPD3O75355 529 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 EGFRP00533 1210 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 HIRAP54198 1017 aaPredicted RBP14.97□□□□□ -0.01
COPB1-208ENST00000532088 DYNLL1P63167 89 aaKnown RBP14.97□□□□□ -0.01
COPB1-208ENST00000532088 TNFAIP1Q13829 316 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 NBPF9Q3BBW0 867 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 PPP4R3BQ5MIZ7 849 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 FAM83AQ86UY5 434 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 APOBEC3FQ8IUX4 373 aaKnown RBP14.97□□□□□ -0.01
COPB1-208ENST00000532088 TEX11Q8IYF3 940 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
COPB1-208ENST00000532088 DSCC1Q9BVC3 393 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 ARMT1Q9H993 441 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 PPP2R3BQ9Y5P8 575 aa14.97□□□□□ -0.01
COPB1-208ENST00000532088 FOCADQ5VW36 1801 aa14.96□□□□□ -0.01
COPB1-208ENST00000532088 WDHD1O75717 1129 aaPredicted RBP14.96□□□□□ -0.01
COPB1-208ENST00000532088 REC8O95072 547 aa14.96□□□□□ -0.01
COPB1-208ENST00000532088 ALX1Q15699 326 aa14.96□□□□□ -0.01
COPB1-208ENST00000532088 ZNF589Q86UQ0 364 aaPredicted RBP14.96□□□□□ -0.01
COPB1-208ENST00000532088 NACAP1Q9BZK3 213 aa14.96□□□□□ -0.01
COPB1-208ENST00000532088 TDRD3Q9H7E2 651 aaKnown RBP14.96□□□□□ -0.01
COPB1-208ENST00000532088 RRAGCQ9HB90 399 aa14.96□□□□□ -0.01
COPB1-208ENST00000532088 MKRN1Q9UHC7 482 aaKnown RBP14.96□□□□□ -0.01
COPB1-208ENST00000532088 PCDHAC2Q9Y5I4 1007 aa14.96□□□□□ -0.01
COPB1-208ENST00000532088 HSPD1P10809 573 aaKnown RBP14.95□□□□□ -0.02
COPB1-208ENST00000532088 TNNI2P48788 182 aa14.95□□□□□ -0.02
COPB1-208ENST00000532088 C8orf34Q49A92 452 aa14.95□□□□□ -0.02
COPB1-208ENST00000532088 DDRGK1Q96HY6 314 aa14.95□□□□□ -0.02
COPB1-208ENST00000532088 IL25Q9H293 177 aa14.95□□□□□ -0.02
COPB1-208ENST00000532088 SLC4A4Q9Y6R1 1079 aa14.95□□□□□ -0.02
COPB1-208ENST00000532088 FLT1P17948 1338 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 GSG1L2A8MUP6 293 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 USP5P45974 858 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 CCDC129Q6ZRS4 1044 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 KIAA1211Q6ZU35 1233 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 LDHDQ86WU2 507 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 FAM151AQ8WW52 585 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 DCP1AQ9NPI6 582 aaPredicted RBP14.94□□□□□ -0.02
COPB1-208ENST00000532088 CDK5RAP2Q96SN8 1893 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 ATRNL1Q5VV63 1379 aa14.94□□□□□ -0.02
COPB1-208ENST00000532088 DDX60LQ5H9U9 1706 aaKnown RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 SBK1Q52WX2 424 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 VARS2Q5ST30 1063 aaKnown RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 ANGEL2Q5VTE6 544 aaKnown RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 IFNL3Q8IZI9 196 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 TGFBRAP1Q8WUH2 860 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 MAP4K1Q92918 833 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 DCPSQ96C86 337 aaKnown RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 ADAM33Q9BZ11 813 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 LSG1Q9H089 658 aaKnown RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 OSBPL5Q9H0X9 879 aaPredicted RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 DHX36Q9H2U1 1008 aaKnown RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 GPBP1L1Q9HC44 474 aaPredicted RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 NMRK2Q9NPI5 230 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 GGA3Q9NZ52 723 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 ARPP21Q9UBL0 812 aaPredicted RBP14.93□□□□□ -0.02
COPB1-208ENST00000532088 FAM198AQ9UFP1 575 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 CTNNA3Q9UI47 895 aa14.93□□□□□ -0.02
COPB1-208ENST00000532088 CLRN2A0PK11 232 aa14.92□□□□□ -0.02
COPB1-208ENST00000532088 FOXP2O15409 715 aa14.92□□□□□ -0.02
COPB1-208ENST00000532088 YY1P25490 414 aa14.92□□□□□ -0.02
COPB1-208ENST00000532088 NFIAQ12857 509 aa14.92□□□□□ -0.02
COPB1-208ENST00000532088 VPS53Q5VIR6 699 aa14.92□□□□□ -0.02
COPB1-208ENST00000532088 AMOTL1Q8IY63 956 aa14.92□□□□□ -0.02
COPB1-208ENST00000532088 SDR42E1Q8WUS8 393 aa14.92□□□□□ -0.02
COPB1-208ENST00000532088 EPB41L4AQ9HCS5 686 aaPredicted RBP14.92□□□□□ -0.02
COPB1-208ENST00000532088 DDX4Q9NQI0 724 aaKnown RBP14.92□□□□□ -0.02
COPB1-208ENST00000532088 NAV1Q8NEY1 1877 aa14.91□□□□□ -0.02
COPB1-208ENST00000532088 CNTNAP1P78357 1384 aa14.91□□□□□ -0.02
COPB1-208ENST00000532088 MAP3K7O43318 606 aa14.91□□□□□ -0.02
COPB1-208ENST00000532088 PRKAB2O43741 272 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms