RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 MYO5AQ9Y4I1 1855 aaKnown RBP21.43■■□□□ 1.02
PKP3-208ENST00000531857 MVPQ14764 893 aaKnown RBP21.42■■□□□ 1.02
PKP3-208ENST00000531857 NEUROD6Q96NK8 337 aa21.42■■□□□ 1.02
PKP3-208ENST00000531857 TAOK2Q9UL54 1235 aa21.42■■□□□ 1.02
PKP3-208ENST00000531857 AKAP2Q9Y2D5 859 aa21.42■■□□□ 1.02
PKP3-208ENST00000531857 NPM3O75607 178 aaKnown RBP21.41■■□□□ 1.02
PKP3-208ENST00000531857 TFRCP02786 760 aaKnown RBP21.41■■□□□ 1.02
PKP3-208ENST00000531857 CT47B1P0C2W7 299 aaPredicted RBP21.41■■□□□ 1.02
PKP3-208ENST00000531857 SPP2Q13103 211 aa21.41■■□□□ 1.02
PKP3-208ENST00000531857 RRP1BQ14684 758 aaKnown RBP21.41■■□□□ 1.02
PKP3-208ENST00000531857 PAK6Q9NQU5 681 aaPredicted RBP21.41■■□□□ 1.02
PKP3-208ENST00000531857 NR2E3Q9Y5X4 410 aa21.41■■□□□ 1.02
PKP3-208ENST00000531857 MTX1Q13505 466 aa21.4■■□□□ 1.02
PKP3-208ENST00000531857 SPATA5Q8NB90 893 aa21.4■■□□□ 1.02
PKP3-208ENST00000531857 PROCA1Q8NCQ7 364 aaPredicted RBP21.4■■□□□ 1.02
PKP3-208ENST00000531857 COA7Q96BR5 231 aa21.4■■□□□ 1.02
PKP3-208ENST00000531857 NSUN4Q96CB9 384 aaKnown RBP21.4■■□□□ 1.02
PKP3-208ENST00000531857 FOCADQ5VW36 1801 aa21.4■■□□□ 1.02
PKP3-208ENST00000531857 RARSP54136 660 aaKnown RBP21.39■■□□□ 1.01
PKP3-208ENST00000531857 FAM110CQ1W6H9 321 aa21.39■■□□□ 1.01
PKP3-208ENST00000531857 CRISPLD2Q9H0B8 497 aa21.39■■□□□ 1.01
PKP3-208ENST00000531857 OSBPL5Q9H0X9 879 aaPredicted RBP21.39■■□□□ 1.01
PKP3-208ENST00000531857 PNMA3Q9UL41 463 aa21.39■■□□□ 1.01
PKP3-208ENST00000531857 COL2A1P02458 1487 aaPredicted RBP21.39■■□□□ 1.01
PKP3-208ENST00000531857 EVI5O60447 810 aa21.38■■□□□ 1.01
PKP3-208ENST00000531857 GNAI3P08754 354 aa21.38■■□□□ 1.01
PKP3-208ENST00000531857 HMGCS2P54868 508 aa21.38■■□□□ 1.01
PKP3-208ENST00000531857 ZNF280CQ8ND82 737 aa21.38■■□□□ 1.01
PKP3-208ENST00000531857 MAST2Q6P0Q8 1798 aa21.38■■□□□ 1.01
PKP3-208ENST00000531857 LDHCP07864 332 aa21.37■■□□□ 1.01
PKP3-208ENST00000531857 ARID4AP29374 1257 aaPredicted RBP21.37■■□□□ 1.01
PKP3-208ENST00000531857 CAP2P40123 477 aa21.37■■□□□ 1.01
PKP3-208ENST00000531857 GSTO1P78417 241 aa21.37■■□□□ 1.01
PKP3-208ENST00000531857 DIS3LQ8TF46 1054 aaKnown RBP21.37■■□□□ 1.01
PKP3-208ENST00000531857 PAWRQ96IZ0 340 aaKnown RBP21.37■■□□□ 1.01
PKP3-208ENST00000531857 RAI14Q9P0K7 980 aa21.37■■□□□ 1.01
PKP3-208ENST00000531857 DDX60LQ5H9U9 1706 aaKnown RBP21.36■■□□□ 1.01
PKP3-208ENST00000531857 MCAMP43121 646 aa21.36■■□□□ 1.01
PKP3-208ENST00000531857 GORABQ5T7V8 394 aa21.36■■□□□ 1.01
PKP3-208ENST00000531857 SH3RF3Q8TEJ3 882 aaPredicted RBP21.36■■□□□ 1.01
PKP3-208ENST00000531857 ARHGAP45Q92619 1136 aa21.36■■□□□ 1.01
PKP3-208ENST00000531857 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.36■■□□□ 1.014e-9■■■□□ 14.6
PKP3-208ENST00000531857 TNNQ9UQP3 1299 aa21.36■■□□□ 1.01
PKP3-208ENST00000531857 MAP4K4O95819 1239 aaPredicted RBP21.35■■□□□ 1.01
PKP3-208ENST00000531857 GCLCP48506 637 aaPredicted RBP21.35■■□□□ 1.01
PKP3-208ENST00000531857 TEX11Q8IYF3 940 aa21.35■■□□□ 1.01
PKP3-208ENST00000531857 ASCC2Q9H1I8 757 aaPredicted RBP21.35■■□□□ 1.01
PKP3-208ENST00000531857 GJD2Q9UKL4 321 aa21.35■■□□□ 1.01
PKP3-208ENST00000531857 PNMA6EA0A0J9YXQ4 647 aa21.34■■□□□ 1.01
PKP3-208ENST00000531857 USP17L5A8MUK1 530 aa21.34■■□□□ 1.01
PKP3-208ENST00000531857 TRIM32Q13049 653 aa21.34■■□□□ 1.01
PKP3-208ENST00000531857 STAP2Q9UGK3 403 aa21.34■■□□□ 1.01
PKP3-208ENST00000531857 SOX1O00570 391 aaPredicted RBP21.33■■□□□ 1.01
PKP3-208ENST00000531857 CAPN2P17655 700 aa21.33■■□□□ 1.01
PKP3-208ENST00000531857 JAG1P78504 1218 aa21.33■■□□□ 1.01
PKP3-208ENST00000531857 SH3D19Q5HYK7 790 aa21.33■■□□□ 1.01
PKP3-208ENST00000531857 TBC1D2Q9BYX2 928 aa21.33■■□□□ 1.01
PKP3-208ENST00000531857 LRP2BPQ9P2M1 347 aa21.33■■□□□ 1.01
PKP3-208ENST00000531857 PEX10O60683 326 aa21.32■■□□□ 1
PKP3-208ENST00000531857 HMGCRP04035 888 aa21.32■■□□□ 1
PKP3-208ENST00000531857 PABPC4Q13310 644 aaKnown RBP eCLIP21.32■■□□□ 1
PKP3-208ENST00000531857 NECAB2Q7Z6G3 386 aa21.32■■□□□ 1
PKP3-208ENST00000531857 SNRKQ9NRH2 765 aa21.32■■□□□ 1
PKP3-208ENST00000531857 HERC5Q9UII4 1024 aaKnown RBP21.32■■□□□ 1
PKP3-208ENST00000531857 G3BP1Q13283 466 aaKnown RBP eCLIP21.31■■□□□ 1
PKP3-208ENST00000531857 MTMR2Q13614 643 aa21.31■■□□□ 1
PKP3-208ENST00000531857 SHROOM1Q2M3G4 852 aaPredicted RBP21.31■■□□□ 1
PKP3-208ENST00000531857 AS3MTQ9HBK9 375 aa21.31■■□□□ 1
PKP3-208ENST00000531857 AATFQ9NY61 560 aaKnown RBP eCLIP21.31■■□□□ 18e-9■■■□□ 14.8
PKP3-208ENST00000531857 PI4KBQ9UBF8 816 aa21.31■■□□□ 1
PKP3-208ENST00000531857 MYH1P12882 1939 aa21.31■■□□□ 1
PKP3-208ENST00000531857 A0A1W2PPC1 479 aa21.3■■□□□ 1
PKP3-208ENST00000531857 GNAI2P04899 355 aa21.3■■□□□ 1
PKP3-208ENST00000531857 UQCRFS1P1P0C7P4 283 aa21.3■■□□□ 1
PKP3-208ENST00000531857 TRIM27P14373 513 aa21.3■■□□□ 1
PKP3-208ENST00000531857 ADGRA1Q86SQ6 560 aa21.3■■□□□ 1
PKP3-208ENST00000531857 TRIB2Q92519 343 aa21.3■■□□□ 1
PKP3-208ENST00000531857 LRCH3Q96II8 777 aa21.3■■□□□ 1
PKP3-208ENST00000531857 WDR18Q9BV38 432 aa21.3■■□□□ 1
PKP3-208ENST00000531857 DNAJC18Q9H819 358 aa21.3■■□□□ 1
PKP3-208ENST00000531857 HMX1Q9NP08 348 aaPredicted RBP21.3■■□□□ 1
PKP3-208ENST00000531857 MORF4L1Q9UBU8 362 aa21.3■■□□□ 1
PKP3-208ENST00000531857 RPTORQ8N122 1335 aa21.29■■□□□ 1
PKP3-208ENST00000531857 LAMA3Q16787 3333 aa21.29■■□□□ 1
PKP3-208ENST00000531857 MNX1P50219 401 aaPredicted RBP21.29■■□□□ 1
PKP3-208ENST00000531857 BACE1P56817 501 aa21.29■■□□□ 1
PKP3-208ENST00000531857 NAA16Q6N069 864 aaPredicted RBP21.29■■□□□ 1
PKP3-208ENST00000531857 MAPKAPK5Q8IW41 473 aa21.29■■□□□ 1
PKP3-208ENST00000531857 C7orf61Q8IZ16 206 aa21.29■■□□□ 1
PKP3-208ENST00000531857 TGFBRAP1Q8WUH2 860 aa21.29■■□□□ 1
PKP3-208ENST00000531857 P2RX7Q99572 595 aaKnown RBP21.29■■□□□ 1
PKP3-208ENST00000531857 TXNRD2Q9NNW7 524 aa21.29■■□□□ 1
PKP3-208ENST00000531857 ANKLE1Q8NAG6 615 aa21.28■■□□□ 1
PKP3-208ENST00000531857 CLUAP1Q96AJ1 413 aa21.28■■□□□ 1
PKP3-208ENST00000531857 NOL10Q9BSC4 688 aaKnown RBP21.28■■□□□ 1
PKP3-208ENST00000531857 DHX36Q9H2U1 1008 aaKnown RBP21.28■■□□□ 1
PKP3-208ENST00000531857 BCAR3O75815 825 aa21.27■■□□□ 1
PKP3-208ENST00000531857 ASNSP08243 561 aa21.27■■□□□ 1
PKP3-208ENST00000531857 CYP2B6P20813 491 aa21.27■■□□□ 1
PKP3-208ENST00000531857 HOXA7P31268 230 aaPredicted RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms