RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 PXYLP1Q8TE99 480 aa16.45■□□□□ 0.22
HIF3A-214ENST00000531043 DIS3LQ8TF46 1054 aaKnown RBP16.45■□□□□ 0.22
HIF3A-214ENST00000531043 NSUN4Q96CB9 384 aaKnown RBP16.45■□□□□ 0.22
HIF3A-214ENST00000531043 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
HIF3A-214ENST00000531043 PLXNB2O15031 1838 aa16.45■□□□□ 0.22
HIF3A-214ENST00000531043 TFRCP02786 760 aaKnown RBP16.44■□□□□ 0.22
HIF3A-214ENST00000531043 TRIM32Q13049 653 aa16.44■□□□□ 0.22
HIF3A-214ENST00000531043 MTX1Q13505 466 aa16.44■□□□□ 0.22
HIF3A-214ENST00000531043 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
HIF3A-214ENST00000531043 SHROOM1Q2M3G4 852 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-214ENST00000531043 SPATA5Q8NB90 893 aa16.44■□□□□ 0.22
HIF3A-214ENST00000531043 PAK6Q9NQU5 681 aaPredicted RBP16.44■□□□□ 0.22
HIF3A-214ENST00000531043 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
HIF3A-214ENST00000531043 PNMA6EA0A0J9YXQ4 647 aa16.43■□□□□ 0.22
HIF3A-214ENST00000531043 SOX1O00570 391 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-214ENST00000531043 NPM3O75607 178 aaKnown RBP16.43■□□□□ 0.22
HIF3A-214ENST00000531043 MCAMP43121 646 aa16.43■□□□□ 0.22
HIF3A-214ENST00000531043 HMGCS2P54868 508 aa16.43■□□□□ 0.22
HIF3A-214ENST00000531043 JAG1P78504 1218 aa16.43■□□□□ 0.22
HIF3A-214ENST00000531043 SH3RF3Q8TEJ3 882 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-214ENST00000531043 CRISPLD2Q9H0B8 497 aa16.43■□□□□ 0.22
HIF3A-214ENST00000531043 OSBPL5Q9H0X9 879 aaPredicted RBP16.43■□□□□ 0.22
HIF3A-214ENST00000531043 AKAP2Q9Y2D5 859 aa16.43■□□□□ 0.22
HIF3A-214ENST00000531043 COL6A3P12111 3177 aa16.42■□□□□ 0.22
HIF3A-214ENST00000531043 CT47B1P0C2W7 299 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-214ENST00000531043 CAP2P40123 477 aa16.42■□□□□ 0.22
HIF3A-214ENST00000531043 FAM110CQ1W6H9 321 aa16.42■□□□□ 0.22
HIF3A-214ENST00000531043 ZNF280CQ8ND82 737 aa16.42■□□□□ 0.22
HIF3A-214ENST00000531043 PAWRQ96IZ0 340 aaKnown RBP16.42■□□□□ 0.22
HIF3A-214ENST00000531043 ASCC2Q9H1I8 757 aaPredicted RBP16.42■□□□□ 0.22
HIF3A-214ENST00000531043 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
HIF3A-214ENST00000531043 GJD2Q9UKL4 321 aa16.42■□□□□ 0.22
HIF3A-214ENST00000531043 HDAC5Q9UQL6 1122 aa16.42■□□□□ 0.22
HIF3A-214ENST00000531043 NR2E3Q9Y5X4 410 aa16.42■□□□□ 0.22
HIF3A-214ENST00000531043 GNAI3P08754 354 aa16.41■□□□□ 0.22
HIF3A-214ENST00000531043 ARID4AP29374 1257 aaPredicted RBP16.41■□□□□ 0.22
HIF3A-214ENST00000531043 TEX11Q8IYF3 940 aa16.41■□□□□ 0.22
HIF3A-214ENST00000531043 PROCA1Q8NCQ7 364 aaPredicted RBP16.41■□□□□ 0.22
HIF3A-214ENST00000531043 COA7Q96BR5 231 aa16.41■□□□□ 0.22
HIF3A-214ENST00000531043 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.41■□□□□ 0.22
HIF3A-214ENST00000531043 SNRKQ9NRH2 765 aa16.41■□□□□ 0.22
HIF3A-214ENST00000531043 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
HIF3A-214ENST00000531043 EVI5O60447 810 aa16.4■□□□□ 0.22
HIF3A-214ENST00000531043 LRCH3Q96II8 777 aa16.4■□□□□ 0.22
HIF3A-214ENST00000531043 PNMA3Q9UL41 463 aa16.4■□□□□ 0.22
HIF3A-214ENST00000531043 COL2A1P02458 1487 aaPredicted RBP16.4■□□□□ 0.22
HIF3A-214ENST00000531043 LDHCP07864 332 aa16.39■□□□□ 0.21
HIF3A-214ENST00000531043 TRIM27P14373 513 aa16.39■□□□□ 0.21
HIF3A-214ENST00000531043 MNX1P50219 401 aaPredicted RBP16.39■□□□□ 0.21
HIF3A-214ENST00000531043 GSTO1P78417 241 aa16.39■□□□□ 0.21
HIF3A-214ENST00000531043 GORABQ5T7V8 394 aa16.39■□□□□ 0.21
HIF3A-214ENST00000531043 ADGRA1Q86SQ6 560 aa16.39■□□□□ 0.21
HIF3A-214ENST00000531043 ARHGAP45Q92619 1136 aa16.39■□□□□ 0.21
HIF3A-214ENST00000531043 DNAJC18Q9H819 358 aa16.39■□□□□ 0.21
HIF3A-214ENST00000531043 A0A0C4DFX4 3053 aa16.38■□□□□ 0.21
HIF3A-214ENST00000531043 USP17L5A8MUK1 530 aa16.38■□□□□ 0.21
HIF3A-214ENST00000531043 BCAR3O75815 825 aa16.38■□□□□ 0.21
HIF3A-214ENST00000531043 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
HIF3A-214ENST00000531043 MTMR2Q13614 643 aa16.38■□□□□ 0.21
HIF3A-214ENST00000531043 SH3D19Q5HYK7 790 aa16.38■□□□□ 0.21
HIF3A-214ENST00000531043 TXNRD2Q9NNW7 524 aa16.38■□□□□ 0.21
HIF3A-214ENST00000531043 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
HIF3A-214ENST00000531043 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
HIF3A-214ENST00000531043 FOCADQ5VW36 1801 aa16.38■□□□□ 0.21
HIF3A-214ENST00000531043 DDX60LQ5H9U9 1706 aaKnown RBP16.37■□□□□ 0.21
HIF3A-214ENST00000531043 HMGCRP04035 888 aa16.37■□□□□ 0.21
HIF3A-214ENST00000531043 GNAI2P04899 355 aa16.37■□□□□ 0.21
HIF3A-214ENST00000531043 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
HIF3A-214ENST00000531043 POTEEQ6S8J3 1075 aa16.37■□□□□ 0.21
HIF3A-214ENST00000531043 MAPKAPK5Q8IW41 473 aa16.37■□□□□ 0.21
HIF3A-214ENST00000531043 TGFBRAP1Q8WUH2 860 aa16.37■□□□□ 0.21
HIF3A-214ENST00000531043 TRIB2Q92519 343 aa16.37■□□□□ 0.21
HIF3A-214ENST00000531043 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
HIF3A-214ENST00000531043 P2RX7Q99572 595 aaKnown RBP16.37■□□□□ 0.21
HIF3A-214ENST00000531043 DBNDD2Q9BQY9 259 aa16.37■□□□□ 0.21
HIF3A-214ENST00000531043 ZMYND8Q9ULU4 1186 aaPredicted RBP16.37■□□□□ 0.21
HIF3A-214ENST00000531043 GDF11O95390 407 aa16.36■□□□□ 0.21
HIF3A-214ENST00000531043 MAP4K4O95819 1239 aaPredicted RBP16.36■□□□□ 0.21
HIF3A-214ENST00000531043 CYP2B6P20813 491 aa16.36■□□□□ 0.21
HIF3A-214ENST00000531043 NECAB2Q7Z6G3 386 aa16.36■□□□□ 0.21
HIF3A-214ENST00000531043 C7orf61Q8IZ16 206 aa16.36■□□□□ 0.21
HIF3A-214ENST00000531043 WDR18Q9BV38 432 aa16.36■□□□□ 0.21
HIF3A-214ENST00000531043 PI4KBQ9UBF8 816 aa16.36■□□□□ 0.21
HIF3A-214ENST00000531043 MORF4L1Q9UBU8 362 aa16.36■□□□□ 0.21
HIF3A-214ENST00000531043 HERC5Q9UII4 1024 aaKnown RBP16.36■□□□□ 0.21
HIF3A-214ENST00000531043 MAST2Q6P0Q8 1798 aa16.36■□□□□ 0.21
HIF3A-214ENST00000531043 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
HIF3A-214ENST00000531043 UQCRFS1P1P0C7P4 283 aa16.35■□□□□ 0.21
HIF3A-214ENST00000531043 BACE1P56817 501 aa16.35■□□□□ 0.21
HIF3A-214ENST00000531043 Q3C1V9 767 aa16.35■□□□□ 0.21
HIF3A-214ENST00000531043 NAA16Q6N069 864 aaPredicted RBP16.35■□□□□ 0.21
HIF3A-214ENST00000531043 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
HIF3A-214ENST00000531043 PIH1D3Q9NQM4 214 aaKnown RBP16.35■□□□□ 0.21
HIF3A-214ENST00000531043 SAP30BPQ9UHR5 308 aaKnown RBP16.35■□□□□ 0.21
HIF3A-214ENST00000531043 PALD1Q9ULE6 856 aa16.35■□□□□ 0.21
HIF3A-214ENST00000531043 DYNLL1P63167 89 aaKnown RBP16.34■□□□□ 0.21
HIF3A-214ENST00000531043 IRX3P78415 501 aaPredicted RBP16.34■□□□□ 0.21
HIF3A-214ENST00000531043 PABPC4Q13310 644 aaKnown RBP eCLIP16.34■□□□□ 0.21
HIF3A-214ENST00000531043 POLA2Q14181 598 aa16.34■□□□□ 0.21
HIF3A-214ENST00000531043 TNNI3KQ59H18 835 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms