RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 ADCY3O60266 1144 aa22.38■■□□□ 1.17
PSMC3-208ENST00000530887 MTFR1Q15390 333 aa22.38■■□□□ 1.17
PSMC3-208ENST00000530887 TMED8Q6PL24 325 aaPredicted RBP22.38■■□□□ 1.17
PSMC3-208ENST00000530887 ZNF280CQ8ND82 737 aa22.38■■□□□ 1.17
PSMC3-208ENST00000530887 PI4KBQ9UBF8 816 aa22.38■■□□□ 1.17
PSMC3-208ENST00000530887 DPF3Q92784 378 aa22.37■■□□□ 1.17
PSMC3-208ENST00000530887 USP17L5A8MUK1 530 aa22.36■■□□□ 1.17
PSMC3-208ENST00000530887 CAP2P40123 477 aa22.36■■□□□ 1.17
PSMC3-208ENST00000530887 FLT3LGP49771 235 aa22.36■■□□□ 1.17
PSMC3-208ENST00000530887 ZKSCAN2Q63HK3 967 aa22.36■■□□□ 1.17
PSMC3-208ENST00000530887 TEX11Q8IYF3 940 aa22.36■■□□□ 1.17
PSMC3-208ENST00000530887 SHISA4Q96DD7 197 aa22.36■■□□□ 1.17
PSMC3-208ENST00000530887 U2AF1L4Q8WU68 220 aaKnown RBP22.35■■□□□ 1.17
PSMC3-208ENST00000530887 FRAT1Q92837 279 aaPredicted RBP22.35■■□□□ 1.17
PSMC3-208ENST00000530887 ZNF512BQ96KM6 892 aaPredicted RBP22.35■■□□□ 1.17
PSMC3-208ENST00000530887 PHIPQ8WWQ0 1821 aa22.35■■□□□ 1.17
PSMC3-208ENST00000530887 H0YGN5 161 aa22.34■■□□□ 1.17
PSMC3-208ENST00000530887 SGPL1O95470 568 aa22.34■■□□□ 1.17
PSMC3-208ENST00000530887 ASNSP08243 561 aa22.34■■□□□ 1.17
PSMC3-208ENST00000530887 FXR1P51114 621 aaKnown RBP eCLIP22.34■■□□□ 1.17
PSMC3-208ENST00000530887 SH3D19Q5HYK7 790 aa22.34■■□□□ 1.17
PSMC3-208ENST00000530887 TTC39AQ5SRH9 613 aa22.34■■□□□ 1.17
PSMC3-208ENST00000530887 NAA16Q6N069 864 aaPredicted RBP22.34■■□□□ 1.17
PSMC3-208ENST00000530887 UBE2Q1Q7Z7E8 422 aa22.34■■□□□ 1.17
PSMC3-208ENST00000530887 TRIM34Q9BYJ4 488 aa22.34■■□□□ 1.17
PSMC3-208ENST00000530887 COLQQ9Y215 455 aaPredicted RBP22.34■■□□□ 1.17
PSMC3-208ENST00000530887 ECM2O94769 699 aaPredicted RBP22.33■■□□□ 1.17
PSMC3-208ENST00000530887 FARP2O94887 1054 aaPredicted RBP22.33■■□□□ 1.17
PSMC3-208ENST00000530887 MCAMP43121 646 aa22.33■■□□□ 1.17
PSMC3-208ENST00000530887 PPP4CP60510 307 aa22.33■■□□□ 1.17
PSMC3-208ENST00000530887 SPP2Q13103 211 aa22.33■■□□□ 1.17
PSMC3-208ENST00000530887 OS9Q13438 667 aaPredicted RBP22.33■■□□□ 1.17
PSMC3-208ENST00000530887 FOXP4Q8IVH2 680 aaPredicted RBP22.33■■□□□ 1.17
PSMC3-208ENST00000530887 ZNF384Q8TF68 577 aa22.33■■□□□ 1.17
PSMC3-208ENST00000530887 GTF3C2Q8WUA4 911 aaPredicted RBP22.33■■□□□ 1.17
PSMC3-208ENST00000530887 PNMA6EA0A0J9YXQ4 647 aa22.32■■□□□ 1.16
PSMC3-208ENST00000530887 C19orf81C9J6K1 198 aa22.32■■□□□ 1.16
PSMC3-208ENST00000530887 ANKRD13CQ8N6S4 541 aa22.32■■□□□ 1.16
PSMC3-208ENST00000530887 WDR18Q9BV38 432 aa22.32■■□□□ 1.16
PSMC3-208ENST00000530887 TMOD4Q9NZQ9 345 aa22.32■■□□□ 1.16
PSMC3-208ENST00000530887 GABRQQ9UN88 632 aa22.32■■□□□ 1.16
PSMC3-208ENST00000530887 INHAP05111 366 aa22.31■■□□□ 1.16
PSMC3-208ENST00000530887 POLA2Q14181 598 aa22.31■■□□□ 1.16
PSMC3-208ENST00000530887 TNNI3KQ59H18 835 aa22.31■■□□□ 1.16
PSMC3-208ENST00000530887 TBC1D9Q6ZT07 1266 aa22.31■■□□□ 1.16
PSMC3-208ENST00000530887 SSH3Q8TE77 659 aa22.31■■□□□ 1.16
PSMC3-208ENST00000530887 FPGT-TNNI3KV9GXZ4 949 aa22.31■■□□□ 1.16
PSMC3-208ENST00000530887 LOC285556D6RIA3 1793 aa22.3■■□□□ 1.16
PSMC3-208ENST00000530887 HLA-DOAP06340 250 aa22.3■■□□□ 1.16
PSMC3-208ENST00000530887 ATP8B2P98198 1209 aa22.3■■□□□ 1.16
PSMC3-208ENST00000530887 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
PSMC3-208ENST00000530887 ANKLE1Q8NAG6 615 aa22.3■■□□□ 1.16
PSMC3-208ENST00000530887 UNC93B1Q9H1C4 597 aa22.3■■□□□ 1.16
PSMC3-208ENST00000530887 PAK6Q9NQU5 681 aaPredicted RBP22.3■■□□□ 1.16
PSMC3-208ENST00000530887 MAST2Q6P0Q8 1798 aa22.3■■□□□ 1.16
PSMC3-208ENST00000530887 TRIOBPQ9H2D6 2365 aa22.3■■□□□ 1.16
PSMC3-208ENST00000530887 A0A1W2PPC1 479 aa22.29■■□□□ 1.16
PSMC3-208ENST00000530887 HMGCS2P54868 508 aa22.29■■□□□ 1.16
PSMC3-208ENST00000530887 IRX3P78415 501 aaPredicted RBP22.29■■□□□ 1.16
PSMC3-208ENST00000530887 TREML2Q5T2D2 321 aa22.29■■□□□ 1.16
PSMC3-208ENST00000530887 PI16Q6UXB8 463 aa22.29■■□□□ 1.16
PSMC3-208ENST00000530887 METTL16Q86W50 562 aaKnown RBP22.29■■□□□ 1.16
PSMC3-208ENST00000530887 BCAR3O75815 825 aa22.28■■□□□ 1.16
PSMC3-208ENST00000530887 TFRCP02786 760 aaKnown RBP22.28■■□□□ 1.16
PSMC3-208ENST00000530887 HMGCRP04035 888 aa22.28■■□□□ 1.16
PSMC3-208ENST00000530887 HOXA7P31268 230 aaPredicted RBP22.28■■□□□ 1.16
PSMC3-208ENST00000530887 BACE1P56817 501 aa22.28■■□□□ 1.16
PSMC3-208ENST00000530887 TRMT44Q8IYL2 757 aaKnown RBP22.28■■□□□ 1.16
PSMC3-208ENST00000530887 CRACR2BQ8N4Y2 399 aaPredicted RBP22.28■■□□□ 1.16
PSMC3-208ENST00000530887 CLUAP1Q96AJ1 413 aa22.28■■□□□ 1.16
PSMC3-208ENST00000530887 AATFQ9NY61 560 aaKnown RBP eCLIP22.28■■□□□ 1.16
PSMC3-208ENST00000530887 MORF4L1Q9UBU8 362 aa22.28■■□□□ 1.16
PSMC3-208ENST00000530887 NOP58Q9Y2X3 529 aaKnown RBP22.28■■□□□ 1.16
PSMC3-208ENST00000530887 ATAD5Q96QE3 1844 aa22.27■■□□□ 1.16
PSMC3-208ENST00000530887 SURF6O75683 361 aaKnown RBP22.27■■□□□ 1.16
PSMC3-208ENST00000530887 TMEM57Q8N5G2 664 aa22.27■■□□□ 1.16
PSMC3-208ENST00000530887 SH3RF3Q8TEJ3 882 aaPredicted RBP22.27■■□□□ 1.16
PSMC3-208ENST00000530887 SOCS4Q8WXH5 440 aa22.27■■□□□ 1.16
PSMC3-208ENST00000530887 ASCC2Q9H1I8 757 aaPredicted RBP22.27■■□□□ 1.16
PSMC3-208ENST00000530887 USP17L10C9JJH3 530 aa22.26■■□□□ 1.15
PSMC3-208ENST00000530887 ELNP15502 786 aa22.26■■□□□ 1.15
PSMC3-208ENST00000530887 CHRDL2Q6WN34 429 aa22.26■■□□□ 1.15
PSMC3-208ENST00000530887 CRISPLD2Q9H0B8 497 aa22.26■■□□□ 1.15
PSMC3-208ENST00000530887 FLT1P17948 1338 aa22.26■■□□□ 1.15
PSMC3-208ENST00000530887 DOCK3Q8IZD9 2030 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 FAM196BA6NMK8 535 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 EVI5O60447 810 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 NECAB2Q7Z6G3 386 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 ERC1Q8IUD2 1116 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 TGFBRAP1Q8WUH2 860 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 DEFB118Q96PH6 123 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 TAOK2Q9UL54 1235 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.25■■□□□ 1.15
PSMC3-208ENST00000530887 RPTORQ8N122 1335 aa22.25■■□□□ 1.15
PSMC3-208ENST00000530887 DBNDD2Q9BQY9 259 aa22.24■■□□□ 1.15
PSMC3-208ENST00000530887 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.24■■□□□ 1.15
PSMC3-208ENST00000530887 HMX1Q9NP08 348 aaPredicted RBP22.24■■□□□ 1.15
PSMC3-208ENST00000530887 ZBTB7BO15156 539 aaPredicted RBP22.23■■□□□ 1.15
PSMC3-208ENST00000530887 CYP2E1P05181 493 aaPredicted RBP22.23■■□□□ 1.15
PSMC3-208ENST00000530887 XRCC5P13010 732 aaKnown RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms