RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 GSCP56915 257 aaPredicted RBP13.33□□□□□ -0.28
TRIM3-210ENST00000530724 SPAG1Q07617 926 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 CUL4BQ13620 913 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 KIF4BQ2VIQ3 1234 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 RILPL1Q5EBL4 403 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 DNAJC21Q5F1R6 531 aaKnown RBP13.33□□□□□ -0.28
TRIM3-210ENST00000530724 TTC39AQ5SRH9 613 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 EMC10Q5UCC4 262 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 RAD9BQ6WBX8 426 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 MPRIPQ6WCQ1 1025 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 MMS22LQ6ZRQ5 1243 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 SYTL4Q96C24 671 aaPredicted RBP13.33□□□□□ -0.28
TRIM3-210ENST00000530724 MED15Q96RN5 788 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 ALG1Q9BT22 464 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 PAGR1Q9BTK6 254 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 SLC52A2Q9HAB3 445 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 FAN1Q9Y2M0 1017 aa13.33□□□□□ -0.28
TRIM3-210ENST00000530724 SRPRBQ9Y5M8 271 aaKnown RBP13.33□□□□□ -0.28
TRIM3-210ENST00000530724 C5P01031 1676 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 EYA2O00167 538 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 GOLIM4O00461 696 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 ACTN4O43707 911 aaKnown RBP13.32□□□□□ -0.28
TRIM3-210ENST00000530724 BMP15O95972 392 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 CDC27P30260 824 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 ARHGAP25P42331 645 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 USP14P54578 494 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 VSNL1P62760 191 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.28
TRIM3-210ENST00000530724 PAPD7Q5XG87 772 aaKnown RBP13.32□□□□□ -0.28
TRIM3-210ENST00000530724 TRAPPC11Q7Z392 1133 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 PPFIBP1Q86W92 1011 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 SPATS2Q86XZ4 545 aaKnown RBP13.32□□□□□ -0.28
TRIM3-210ENST00000530724 USHBP1Q8N6Y0 703 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 OSBP2Q969R2 916 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 MYD88Q99836 296 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 TEX13AQ9BXU3 409 aaPredicted RBP13.32□□□□□ -0.28
TRIM3-210ENST00000530724 LIMA1Q9UHB6 759 aaKnown RBP13.32□□□□□ -0.28
TRIM3-210ENST00000530724 CEP131Q9UPN4 1083 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 PHF8Q9UPP1 1060 aa13.32□□□□□ -0.28
TRIM3-210ENST00000530724 SCN11AQ9UI33 1791 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 M0R2C6 588 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 FGAP02671 866 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
TRIM3-210ENST00000530724 EPB41P11171 864 aaKnown RBP13.31□□□□□ -0.28
TRIM3-210ENST00000530724 IFNAR1P17181 557 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 PIP4K2AP48426 406 aaPredicted RBP13.31□□□□□ -0.28
TRIM3-210ENST00000530724 NBPF14Q5TI25 921 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 COPS6Q7L5N1 327 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
TRIM3-210ENST00000530724 TADA2BQ86TJ2 420 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 NOSTRINQ8IVI9 506 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 STK11IPQ8N1F8 1099 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 KLHDC4Q8TBB5 520 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 GSDMAQ96QA5 445 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 MYCBPQ99417 103 aaPredicted RBP13.31□□□□□ -0.28
TRIM3-210ENST00000530724 PYM1Q9BRP8 204 aaKnown RBP13.31□□□□□ -0.28
TRIM3-210ENST00000530724 EPC1Q9H2F5 836 aa13.31□□□□□ -0.28
TRIM3-210ENST00000530724 AATFQ9NY61 560 aaKnown RBP eCLIP13.31□□□□□ -0.28
TRIM3-210ENST00000530724 DISP2A7MBM2 1401 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 ARFGEF2Q9Y6D5 1785 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 ANO9A1A5B4 782 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 ZEB2O60315 1214 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 FMNL1O95466 1100 aaPredicted RBP13.3□□□□□ -0.28
TRIM3-210ENST00000530724 SYF2O95926 243 aaKnown RBP13.3□□□□□ -0.28
TRIM3-210ENST00000530724 IFIT1P09914 478 aaKnown RBP13.3□□□□□ -0.28
TRIM3-210ENST00000530724 ADKP55263 362 aaKnown RBP13.3□□□□□ -0.28
TRIM3-210ENST00000530724 PPP2R5BQ15173 497 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 WASHC4Q2M389 1173 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 FILIP1LQ4L180 1135 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 MCTP2Q6DN12 878 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 OTUD7BQ6GQQ9 843 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 TMED8Q6PL24 325 aaPredicted RBP13.3□□□□□ -0.28
TRIM3-210ENST00000530724 APOA5Q6Q788 366 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 CYP26C1Q6V0L0 522 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 AEBP2Q6ZN18 517 aaPredicted RBP13.3□□□□□ -0.28
TRIM3-210ENST00000530724 C1orf131Q8NDD1 294 aaKnown RBP13.3□□□□□ -0.28
TRIM3-210ENST00000530724 EHBP1Q8NDI1 1231 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 COG1Q8WTW3 980 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 HAUS4Q9H6D7 363 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 GGA2Q9UJY4 613 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 TIAM2Q8IVF5 1701 aa13.3□□□□□ -0.28
TRIM3-210ENST00000530724 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
TRIM3-210ENST00000530724 USP8P40818 1118 aa13.29□□□□□ -0.28
TRIM3-210ENST00000530724 METAP2P50579 478 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRIM3-210ENST00000530724 CKAP4Q07065 602 aaKnown RBP13.29□□□□□ -0.28
TRIM3-210ENST00000530724 TRIM29Q14134 588 aa13.29□□□□□ -0.28
TRIM3-210ENST00000530724 POTEDQ86YR6 584 aa13.29□□□□□ -0.28
TRIM3-210ENST00000530724 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
TRIM3-210ENST00000530724 CCDC148Q8NFR7 591 aa13.29□□□□□ -0.28
TRIM3-210ENST00000530724 LTV1Q96GA3 475 aaPredicted RBP13.29□□□□□ -0.28
TRIM3-210ENST00000530724 DEF6Q9H4E7 631 aa13.29□□□□□ -0.28
TRIM3-210ENST00000530724 HPCAL4Q9UM19 191 aa13.29□□□□□ -0.28
TRIM3-210ENST00000530724 MYO6Q9UM54 1294 aa13.29□□□□□ -0.28
TRIM3-210ENST00000530724 KIF1AQ12756 1690 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 A0A1W2PQC6 194 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 SOWAHDA6NJG2 315 aa13.28□□□□□ -0.28
TRIM3-210ENST00000530724 ZNF213O14771 459 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms