RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 MAP4K4O95819 1239 aaPredicted RBP27.52■■■□□ 2
PACSIN3-207ENST00000530513 GJB1P08034 283 aa27.52■■■□□ 2
PACSIN3-207ENST00000530513 GJA8P48165 433 aa27.52■■■□□ 2
PACSIN3-207ENST00000530513 RRP1BQ14684 758 aaKnown RBP27.52■■■□□ 2
PACSIN3-207ENST00000530513 TEX11Q8IYF3 940 aa27.52■■■□□ 2
PACSIN3-207ENST00000530513 RNF208Q9H0X6 261 aa27.52■■■□□ 2
PACSIN3-207ENST00000530513 UQCRFS1P1P0C7P4 283 aa27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 FLT3LGP49771 235 aa27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 FXR1P51114 621 aaKnown RBP eCLIP27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 UBXN2AP68543 259 aa27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 NKX2-3Q8TAU0 364 aa27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 SH3RF3Q8TEJ3 882 aaPredicted RBP27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 SNRKQ9NRH2 765 aa27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 LRP2BPQ9P2M1 347 aa27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 SZT2Q5T011 3432 aa27.51■■□□□ 1.99
PACSIN3-207ENST00000530513 TNPO2O14787 897 aaKnown RBP27.5■■□□□ 1.99
PACSIN3-207ENST00000530513 ELNP15502 786 aa27.5■■□□□ 1.99
PACSIN3-207ENST00000530513 UBE2Q1Q7Z7E8 422 aa27.5■■□□□ 1.99
PACSIN3-207ENST00000530513 UNC93B1Q9H1C4 597 aa27.5■■□□□ 1.99
PACSIN3-207ENST00000530513 TRIOBPQ9H2D6 2365 aa27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 ADCY3O60266 1144 aa27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 SPP2Q13103 211 aa27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 POLA2Q14181 598 aa27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 TNNI3KQ59H18 835 aa27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 ANKRD13CQ8N6S4 541 aa27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 PROCA1Q8NCQ7 364 aaPredicted RBP27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 DBNDD2Q9BQY9 259 aa27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 FPGT-TNNI3KV9GXZ4 949 aa27.49■■□□□ 1.99
PACSIN3-207ENST00000530513 PLXNB2O15031 1838 aa27.48■■□□□ 1.99
PACSIN3-207ENST00000530513 ZKSCAN2Q63HK3 967 aa27.48■■□□□ 1.99
PACSIN3-207ENST00000530513 ZNF280CQ8ND82 737 aa27.48■■□□□ 1.99
PACSIN3-207ENST00000530513 C1orf115Q9H7X2 142 aa27.48■■□□□ 1.99
PACSIN3-207ENST00000530513 AATFQ9NY61 560 aaKnown RBP eCLIP27.48■■□□□ 1.99
PACSIN3-207ENST00000530513 PNMA3Q9UL41 463 aa27.48■■□□□ 1.99
PACSIN3-207ENST00000530513 INHAP05111 366 aa27.47■■□□□ 1.99
PACSIN3-207ENST00000530513 CAP2P40123 477 aa27.47■■□□□ 1.99
PACSIN3-207ENST00000530513 HMGCS2P54868 508 aa27.47■■□□□ 1.99
PACSIN3-207ENST00000530513 TTC39AQ5SRH9 613 aa27.47■■□□□ 1.99
PACSIN3-207ENST00000530513 ADGRA1Q86SQ6 560 aa27.47■■□□□ 1.99
PACSIN3-207ENST00000530513 U2AF1L4Q8WU68 220 aaKnown RBP27.47■■□□□ 1.99
PACSIN3-207ENST00000530513 GPR108Q9NPR9 543 aa27.47■■□□□ 1.99
PACSIN3-207ENST00000530513 ALPK3Q96L96 1907 aa27.47■■□□□ 1.99
PACSIN3-207ENST00000530513 MYH1P12882 1939 aa27.46■■□□□ 1.99
PACSIN3-207ENST00000530513 FAM110CQ1W6H9 321 aa27.46■■□□□ 1.99
PACSIN3-207ENST00000530513 NAA16Q6N069 864 aaPredicted RBP27.46■■□□□ 1.99
PACSIN3-207ENST00000530513 SSH3Q8TE77 659 aa27.46■■□□□ 1.99
PACSIN3-207ENST00000530513 HERC5Q9UII4 1024 aaKnown RBP27.46■■□□□ 1.99
PACSIN3-207ENST00000530513 OS9Q13438 667 aaPredicted RBP27.45■■□□□ 1.98
PACSIN3-207ENST00000530513 IRF5Q13568 498 aa27.45■■□□□ 1.98
PACSIN3-207ENST00000530513 PXYLP1Q8TE99 480 aa27.45■■□□□ 1.98
PACSIN3-207ENST00000530513 NOL10Q9BSC4 688 aaKnown RBP27.45■■□□□ 1.98
PACSIN3-207ENST00000530513 FLT1P17948 1338 aa27.44■■□□□ 1.98
PACSIN3-207ENST00000530513 CYP2E1P05181 493 aaPredicted RBP27.44■■□□□ 1.98
PACSIN3-207ENST00000530513 DPF3Q92784 378 aa27.44■■□□□ 1.98
PACSIN3-207ENST00000530513 TBC1D2Q9BYX2 928 aa27.44■■□□□ 1.98
PACSIN3-207ENST00000530513 DNAJC18Q9H819 358 aa27.44■■□□□ 1.98
PACSIN3-207ENST00000530513 TAOK2Q9UL54 1235 aa27.44■■□□□ 1.98
PACSIN3-207ENST00000530513 USP17L5A8MUK1 530 aa27.43■■□□□ 1.98
PACSIN3-207ENST00000530513 FARP2O94887 1054 aaPredicted RBP27.43■■□□□ 1.98
PACSIN3-207ENST00000530513 CCDC158Q5M9N0 1113 aa27.43■■□□□ 1.98
PACSIN3-207ENST00000530513 CHRDL2Q6WN34 429 aa27.43■■□□□ 1.98
PACSIN3-207ENST00000530513 MAPKAPK5Q8IW41 473 aa27.43■■□□□ 1.98
PACSIN3-207ENST00000530513 MIER1Q8N108 512 aa27.43■■□□□ 1.98
PACSIN3-207ENST00000530513 PI4KBQ9UBF8 816 aa27.43■■□□□ 1.98
PACSIN3-207ENST00000530513 SURF6O75683 361 aaKnown RBP27.42■■□□□ 1.98
PACSIN3-207ENST00000530513 JAG1P78504 1218 aa27.42■■□□□ 1.98
PACSIN3-207ENST00000530513 ATP8B2P98198 1209 aa27.42■■□□□ 1.98
PACSIN3-207ENST00000530513 SHROOM1Q2M3G4 852 aaPredicted RBP27.42■■□□□ 1.98
PACSIN3-207ENST00000530513 TGFBRAP1Q8WUH2 860 aa27.42■■□□□ 1.98
PACSIN3-207ENST00000530513 COA7Q96BR5 231 aa27.42■■□□□ 1.98
PACSIN3-207ENST00000530513 TLR7Q9NYK1 1049 aaKnown RBP27.42■■□□□ 1.98
PACSIN3-207ENST00000530513 SGPL1O95470 568 aa27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 BAG3O95817 575 aa27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 ZAP70P43403 619 aa27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 SH3D19Q5HYK7 790 aa27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 HTATIP2Q9BUP3 242 aa27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 ASCC2Q9H1I8 757 aaPredicted RBP27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 DHX36Q9H2U1 1008 aaKnown RBP27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 AS3MTQ9HBK9 375 aa27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 PIH1D3Q9NQM4 214 aaKnown RBP27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 DBNLQ9UJU6 430 aaKnown RBP27.41■■□□□ 1.98
PACSIN3-207ENST00000530513 RLBP1P12271 317 aa27.4■■□□□ 1.98
PACSIN3-207ENST00000530513 PLCG2P16885 1265 aa27.4■■□□□ 1.98
PACSIN3-207ENST00000530513 GCLCP48506 637 aaPredicted RBP27.4■■□□□ 1.98
PACSIN3-207ENST00000530513 PPP4CP60510 307 aa27.4■■□□□ 1.98
PACSIN3-207ENST00000530513 PABPC4Q13310 644 aaKnown RBP eCLIP27.4■■□□□ 1.98
PACSIN3-207ENST00000530513 MTMR2Q13614 643 aa27.4■■□□□ 1.98
PACSIN3-207ENST00000530513 PAK6Q9NQU5 681 aaPredicted RBP27.4■■□□□ 1.98
PACSIN3-207ENST00000530513 DDX60LQ5H9U9 1706 aaKnown RBP27.4■■□□□ 1.98
PACSIN3-207ENST00000530513 FTSJ3Q8IY81 847 aaKnown RBP27.39■■□□□ 1.98
PACSIN3-207ENST00000530513 ZNF512BQ96KM6 892 aaPredicted RBP27.39■■□□□ 1.98
PACSIN3-207ENST00000530513 DEFB118Q96PH6 123 aa27.39■■□□□ 1.98
PACSIN3-207ENST00000530513 ITPRIPQ8IWB1 547 aa27.38■■□□□ 1.97
PACSIN3-207ENST00000530513 WDR18Q9BV38 432 aa27.38■■□□□ 1.97
PACSIN3-207ENST00000530513 PALD1Q9ULE6 856 aa27.38■■□□□ 1.97
PACSIN3-207ENST00000530513 GDF11O95390 407 aa27.37■■□□□ 1.97
PACSIN3-207ENST00000530513 ASNSP08243 561 aa27.37■■□□□ 1.97
PACSIN3-207ENST00000530513 HNRNPUQ00839 825 aaKnown RBP eCLIP27.37■■□□□ 1.97
PACSIN3-207ENST00000530513 METTL16Q86W50 562 aaKnown RBP27.37■■□□□ 1.97
PACSIN3-207ENST00000530513 NAV1Q8NEY1 1877 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms