RNA–Protein interactions for RNA: ENST00000530426.1

LTBP3-216, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 431 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-216ENST00000530426 ANAPC4Q9UJX5 808 aa18.21■□□□□ 0.51
LTBP3-216ENST00000530426 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
LTBP3-216ENST00000530426 COL2A1P02458 1487 aaPredicted RBP18.2■□□□□ 0.5
LTBP3-216ENST00000530426 ATRNL1Q5VV63 1379 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 SRCAPQ6ZRS2 3230 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 E7EWF7 191 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 TRDNQ13061 729 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 KRT32Q14532 448 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 AKNAD1Q5T1N1 836 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 MAP1SQ66K74 1059 aaPredicted RBP18.2■□□□□ 0.5
LTBP3-216ENST00000530426 CDC37L1Q7L3B6 337 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 FOXP4Q8IVH2 680 aaPredicted RBP18.2■□□□□ 0.5
LTBP3-216ENST00000530426 TBC1D32Q96NH3 1257 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 INCENPQ9NQS7 918 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 SERPINB13Q9UIV8 391 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 TAF6LQ9Y6J9 622 aa18.2■□□□□ 0.5
LTBP3-216ENST00000530426 LAMA4Q16363 1823 aa18.19■□□□□ 0.5
LTBP3-216ENST00000530426 RBM25P49756 843 aaKnown RBP18.19■□□□□ 0.5
LTBP3-216ENST00000530426 NBPF12Q5TAG4 269 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-216ENST00000530426 RALYLQ86SE5 291 aaKnown RBP18.19■□□□□ 0.5
LTBP3-216ENST00000530426 CDAN1Q8IWY9 1227 aa18.19■□□□□ 0.5
LTBP3-216ENST00000530426 STAG1Q8WVM7 1258 aa18.19■□□□□ 0.5
LTBP3-216ENST00000530426 KCNB2Q92953 911 aa18.19■□□□□ 0.5
LTBP3-216ENST00000530426 JAKMIP1Q96N16 626 aaKnown RBP18.19■□□□□ 0.5
LTBP3-216ENST00000530426 GLIS2Q9BZE0 524 aaPredicted RBP18.19■□□□□ 0.5
LTBP3-216ENST00000530426 NBPF3Q9H094 633 aa18.19■□□□□ 0.5
LTBP3-216ENST00000530426 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.19■□□□□ 0.5
LTBP3-216ENST00000530426 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
LTBP3-216ENST00000530426 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 PRDM1O75626 825 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 SLURP2P0DP57 97 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 CDK8P49336 464 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 ANAPC15P60006 121 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 SUPT20HL1Q3ZLR7 823 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 STOX1Q6ZVD7 989 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 MIGA2Q7L4E1 593 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 ZNF444Q8N0Y2 327 aaPredicted RBP18.18■□□□□ 0.5
LTBP3-216ENST00000530426 SLC44A5Q8NCS7 719 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 NCOA7Q8NI08 942 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 HOOK2Q96ED9 719 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 TEPSINQ96N21 525 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 EHD4Q9H223 541 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 SWAP70Q9UH65 585 aa18.18■□□□□ 0.5
LTBP3-216ENST00000530426 PSMA5P28066 241 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 ADCK5Q3MIX3 580 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 TSGA10IPQ3SY00 556 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 DLK2Q6UY11 383 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 C16orf86Q6ZW13 317 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 NEK1Q96PY6 1258 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 KRT23Q9C075 422 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 NEDD4P46934 1319 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 ROBO3Q96MS0 1386 aa18.17■□□□□ 0.5
LTBP3-216ENST00000530426 B4E1Z4 1266 aa18.16■□□□□ 0.5
LTBP3-216ENST00000530426 RANBP6O60518 1105 aaKnown RBP18.16■□□□□ 0.5
LTBP3-216ENST00000530426 PCP11498 1178 aaKnown RBP18.16■□□□□ 0.5
LTBP3-216ENST00000530426 NF2P35240 595 aa18.16■□□□□ 0.5
LTBP3-216ENST00000530426 DCAF15Q66K64 600 aa18.16■□□□□ 0.5
LTBP3-216ENST00000530426 CDCA5Q96FF9 252 aa18.16■□□□□ 0.5
LTBP3-216ENST00000530426 HERC5Q9UII4 1024 aaKnown RBP18.16■□□□□ 0.5
LTBP3-216ENST00000530426 TACC3Q9Y6A5 838 aa18.16■□□□□ 0.5
LTBP3-216ENST00000530426 POLR2AP24928 1970 aaKnown RBP18.16■□□□□ 0.5
LTBP3-216ENST00000530426 CASTP20810 708 aaKnown RBP18.15■□□□□ 0.5
LTBP3-216ENST00000530426 GABPAQ06546 454 aa18.15■□□□□ 0.5
LTBP3-216ENST00000530426 PRKG1Q13976 671 aa18.15■□□□□ 0.5
LTBP3-216ENST00000530426 CHADLQ6NUI6 762 aa18.15■□□□□ 0.5
LTBP3-216ENST00000530426 BLOC1S2Q6QNY1 142 aa18.15■□□□□ 0.5
LTBP3-216ENST00000530426 ESR2Q92731 530 aa18.15■□□□□ 0.5
LTBP3-216ENST00000530426 ZNF408Q9H9D4 720 aa18.15■□□□□ 0.5
LTBP3-216ENST00000530426 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.15■□□□□ 0.5
LTBP3-216ENST00000530426 TSPY2A6NKD2 308 aa18.14■□□□□ 0.49
LTBP3-216ENST00000530426 MPHOSPH10O00566 681 aaKnown RBP18.14■□□□□ 0.49
LTBP3-216ENST00000530426 ORC4O43929 436 aa18.14■□□□□ 0.49
LTBP3-216ENST00000530426 TBC1D12O60347 775 aa18.14■□□□□ 0.49
LTBP3-216ENST00000530426 KDM4AO75164 1064 aa18.14■□□□□ 0.49
LTBP3-216ENST00000530426 CERKLQ49MI3 558 aaPredicted RBP18.14■□□□□ 0.49
LTBP3-216ENST00000530426 FAM47AQ5JRC9 791 aa18.14■□□□□ 0.49
LTBP3-216ENST00000530426 ZNF341Q9BYN7 854 aa18.14■□□□□ 0.49
LTBP3-216ENST00000530426 SIPA1L1O43166 1804 aa18.14■□□□□ 0.49
LTBP3-216ENST00000530426 TRAF5O00463 557 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 KIF3CO14782 793 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 HMGB1P09429 215 aaKnown RBP18.13■□□□□ 0.49
LTBP3-216ENST00000530426 TSPY3P0CV98 308 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 TSPY8P0CW00 308 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 CPA1P15085 419 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 SHMT1P34896 483 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 TFAP4Q01664 338 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 TTLL12Q14166 644 aaPredicted RBP18.13■□□□□ 0.49
LTBP3-216ENST00000530426 CHST3Q7LGC8 479 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
LTBP3-216ENST00000530426 DNAJC18Q9H819 358 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 TAOK2Q9UL54 1235 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 CYP46A1Q9Y6A2 500 aa18.13■□□□□ 0.49
LTBP3-216ENST00000530426 FGRP09769 529 aa18.12■□□□□ 0.49
LTBP3-216ENST00000530426 RASA1P20936 1047 aa18.12■□□□□ 0.49
LTBP3-216ENST00000530426 MCM5P33992 734 aa18.12■□□□□ 0.49
LTBP3-216ENST00000530426 METTL16Q86W50 562 aaKnown RBP18.12■□□□□ 0.49
LTBP3-216ENST00000530426 TM6SF1Q9BZW5 370 aa18.12■□□□□ 0.49
LTBP3-216ENST00000530426 FZD1Q9UP38 647 aa18.12■□□□□ 0.49
LTBP3-216ENST00000530426 PPP1R12BO60237 982 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms