RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 DBNDD2Q9BQY9 259 aa25.52■■□□□ 1.68
TSPAN4-219ENST00000530404 COL2A1P02458 1487 aaPredicted RBP25.52■■□□□ 1.68
TSPAN4-219ENST00000530404 PLXNB2O15031 1838 aa25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 NPM3O75607 178 aaKnown RBP25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 OS9Q13438 667 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 POLA2Q14181 598 aa25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 TNNI3KQ59H18 835 aa25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 TTC39AQ5SRH9 613 aa25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 SMCR8Q8TEV9 937 aaPredicted RBP25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 AGTPBP1Q9UPW5 1226 aa25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 SLC45A1Q9Y2W3 748 aa25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 FPGT-TNNI3KV9GXZ4 949 aa25.51■■□□□ 1.67
TSPAN4-219ENST00000530404 ALPK3Q96L96 1907 aa25.5■■□□□ 1.67
TSPAN4-219ENST00000530404 RNF208Q9H0X6 261 aa25.5■■□□□ 1.67
TSPAN4-219ENST00000530404 AATFQ9NY61 560 aaKnown RBP eCLIP25.5■■□□□ 1.67
TSPAN4-219ENST00000530404 SPP2Q13103 211 aa25.49■■□□□ 1.67
TSPAN4-219ENST00000530404 NAA16Q6N069 864 aaPredicted RBP25.49■■□□□ 1.67
TSPAN4-219ENST00000530404 ANKRD13CQ8N6S4 541 aa25.49■■□□□ 1.67
TSPAN4-219ENST00000530404 ELNP15502 786 aa25.48■■□□□ 1.67
TSPAN4-219ENST00000530404 FLT3LGP49771 235 aa25.48■■□□□ 1.67
TSPAN4-219ENST00000530404 UBXN2AP68543 259 aa25.48■■□□□ 1.67
TSPAN4-219ENST00000530404 ATP8B2P98198 1209 aa25.48■■□□□ 1.67
TSPAN4-219ENST00000530404 ADGRA1Q86SQ6 560 aa25.48■■□□□ 1.67
TSPAN4-219ENST00000530404 NOL10Q9BSC4 688 aaKnown RBP25.48■■□□□ 1.67
TSPAN4-219ENST00000530404 TRIOBPQ9H2D6 2365 aa25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 H0YGN5 161 aa25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 TNPO2O14787 897 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 ADCY3O60266 1144 aa25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 SURF6O75683 361 aaKnown RBP25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 MAP4K4O95819 1239 aaPredicted RBP25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 CAP2P40123 477 aa25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 HMGCS2P54868 508 aa25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 SLAIN1Q8ND83 568 aa25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 SSH3Q8TE77 659 aa25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 UNC93B1Q9H1C4 597 aa25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 COLQQ9Y215 455 aaPredicted RBP25.47■■□□□ 1.67
TSPAN4-219ENST00000530404 CYP2E1P05181 493 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 GJA8P48165 433 aa25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 HNRNPUQ00839 825 aaKnown RBP eCLIP25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 CCDC158Q5M9N0 1113 aa25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 MAPKAPK5Q8IW41 473 aa25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 ZNF280CQ8ND82 737 aa25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 TGFBRAP1Q8WUH2 860 aa25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 GPR108Q9NPR9 543 aa25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 TAOK2Q9UL54 1235 aa25.46■■□□□ 1.67
TSPAN4-219ENST00000530404 GJB1P08034 283 aa25.45■■□□□ 1.66
TSPAN4-219ENST00000530404 RLBP1P12271 317 aa25.45■■□□□ 1.66
TSPAN4-219ENST00000530404 ZAP70P43403 619 aa25.45■■□□□ 1.66
TSPAN4-219ENST00000530404 ITPRIPQ8IWB1 547 aa25.45■■□□□ 1.66
TSPAN4-219ENST00000530404 FTSJ3Q8IY81 847 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-219ENST00000530404 PROCA1Q8NCQ7 364 aaPredicted RBP25.45■■□□□ 1.66
TSPAN4-219ENST00000530404 TLR7Q9NYK1 1049 aaKnown RBP25.45■■□□□ 1.66
TSPAN4-219ENST00000530404 SHROOM1Q2M3G4 852 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-219ENST00000530404 NKX2-3Q8TAU0 364 aa25.44■■□□□ 1.66
TSPAN4-219ENST00000530404 DPF3Q92784 378 aa25.44■■□□□ 1.66
TSPAN4-219ENST00000530404 CCDC8Q9H0W5 538 aaPredicted RBP25.44■■□□□ 1.66
TSPAN4-219ENST00000530404 PIH1D3Q9NQM4 214 aaKnown RBP25.44■■□□□ 1.66
TSPAN4-219ENST00000530404 PNMA3Q9UL41 463 aa25.44■■□□□ 1.66
TSPAN4-219ENST00000530404 USP17L5A8MUK1 530 aa25.43■■□□□ 1.66
TSPAN4-219ENST00000530404 BAG3O95817 575 aa25.43■■□□□ 1.66
TSPAN4-219ENST00000530404 INHAP05111 366 aa25.43■■□□□ 1.66
TSPAN4-219ENST00000530404 PI4KBQ9UBF8 816 aa25.43■■□□□ 1.66
TSPAN4-219ENST00000530404 HERC5Q9UII4 1024 aaKnown RBP25.43■■□□□ 1.66
TSPAN4-219ENST00000530404 FLT1P17948 1338 aa25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 FXR1P51114 621 aaKnown RBP eCLIP25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 DYNLL1P63167 89 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 JAG1P78504 1218 aa25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 U2AF1L4Q8WU68 220 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 DNAJC18Q9H819 358 aa25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 SAP30BPQ9UHR5 308 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 DBNLQ9UJU6 430 aaKnown RBP25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 NAV1Q8NEY1 1877 aa25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 SZT2Q5T011 3432 aa25.42■■□□□ 1.66
TSPAN4-219ENST00000530404 RANBP2P49792 3224 aaKnown RBP25.41■■□□□ 1.66
TSPAN4-219ENST00000530404 FAM110CQ1W6H9 321 aa25.41■■□□□ 1.66
TSPAN4-219ENST00000530404 UBE2Q1Q7Z7E8 422 aa25.41■■□□□ 1.66
TSPAN4-219ENST00000530404 ASCC2Q9H1I8 757 aaPredicted RBP25.41■■□□□ 1.66
TSPAN4-219ENST00000530404 PALD1Q9ULE6 856 aa25.41■■□□□ 1.66
TSPAN4-219ENST00000530404 NDUFB9Q9Y6M9 179 aa25.41■■□□□ 1.66
TSPAN4-219ENST00000530404 MYH8P13535 1937 aa25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 ZBTB7BO15156 539 aaPredicted RBP25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 GDF11O95390 407 aa25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 PLCG2P16885 1265 aa25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 PPP4CP60510 307 aa25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 MTMR2Q13614 643 aa25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 COA7Q96BR5 231 aa25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 TBC1D2Q9BYX2 928 aa25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 DHX36Q9H2U1 1008 aaKnown RBP25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 AS3MTQ9HBK9 375 aa25.4■■□□□ 1.66
TSPAN4-219ENST00000530404 IRF5Q13568 498 aa25.39■■□□□ 1.66
TSPAN4-219ENST00000530404 SH3D19Q5HYK7 790 aa25.39■■□□□ 1.66
TSPAN4-219ENST00000530404 MIER1Q8N108 512 aa25.39■■□□□ 1.66
TSPAN4-219ENST00000530404 CRACR2BQ8N4Y2 399 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-219ENST00000530404 PXYLP1Q8TE99 480 aa25.39■■□□□ 1.66
TSPAN4-219ENST00000530404 EAF2Q96CJ1 260 aaPredicted RBP25.39■■□□□ 1.66
TSPAN4-219ENST00000530404 NOP58Q9Y2X3 529 aaKnown RBP25.39■■□□□ 1.66
TSPAN4-219ENST00000530404 PEX10O60683 326 aa25.38■■□□□ 1.65
TSPAN4-219ENST00000530404 FARP2O94887 1054 aaPredicted RBP25.38■■□□□ 1.65
TSPAN4-219ENST00000530404 SGPL1O95470 568 aa25.38■■□□□ 1.65
TSPAN4-219ENST00000530404 CHRDL2Q6WN34 429 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms