RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 AMPD3Q01432 767 aa9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 PDE4BQ07343 736 aa9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 PDE3AQ14432 1141 aa9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 TCEA2Q15560 299 aa9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 TMEM201Q5SNT2 666 aa9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 VHLLQ6RSH7 139 aa9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 C20orf204Q6ZNR8 217 aa9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 PHAXQ9H814 394 aaKnown RBP9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
CAPRIN1-208ENST00000530008 ASMTLO95671 621 aa9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 LIG1P18858 919 aa9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 AFF1P51825 1210 aaKnown RBP9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 CDCP2Q5VXM1 449 aa9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 RPUSD2Q8IZ73 545 aaKnown RBP9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 WDR89Q96FK6 387 aaPredicted RBP9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 SLC9A7Q96T83 725 aa9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.97
CAPRIN1-208ENST00000530008 DCDC2CA8MYV0 355 aa9.01□□□□□ -0.97
CAPRIN1-208ENST00000530008 C11orf95C9JLR9 678 aaPredicted RBP9.01□□□□□ -0.97
CAPRIN1-208ENST00000530008 TNFRSF10CO14798 259 aa9.01□□□□□ -0.97
CAPRIN1-208ENST00000530008 SYNPOQ8N3V7 929 aa9.01□□□□□ -0.97
CAPRIN1-208ENST00000530008 GOLGA6L1Q8N7Z2 621 aa9.01□□□□□ -0.97
CAPRIN1-208ENST00000530008 ZSWIM2Q8NEG5 633 aa9.01□□□□□ -0.97
CAPRIN1-208ENST00000530008 SPATA9Q9BWV2 254 aa9.01□□□□□ -0.97
CAPRIN1-208ENST00000530008 PCDHB10Q9UN67 800 aa9.01□□□□□ -0.97
CAPRIN1-208ENST00000530008 PRAMEF27A3QJZ7 478 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 ALBP02768 609 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 FAM153BP0C7A2 387 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 SLCO4C1Q6ZQN7 724 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 C12orf40Q86WS4 652 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 WFDC8Q8IUA0 241 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 KLHDC7BQ96G42 594 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 KLHL42Q9P2K6 505 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 KLHL3Q9UH77 587 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 ADAM30Q9UKF2 790 aa9□□□□□ -0.97
CAPRIN1-208ENST00000530008 FAM86C2PA6NEL3 165 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 SUSD5O60279 629 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 PGRP06401 933 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 GRK4P32298 578 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 SUZ12Q15022 739 aaKnown RBP8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 SLC10A6Q3KNW5 377 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 DALRD3Q5D0E6 543 aaKnown RBP8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 ZC3H12AQ5D1E8 599 aaKnown RBP8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 TMEM67Q5HYA8 995 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 KIAA1211LQ6NV74 962 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 KLHL23Q8NBE8 558 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 KLHL6Q8WZ60 621 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 USP26Q9BXU7 913 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 EPN3Q9H201 632 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 GDF2Q9UK05 429 aaPredicted RBP8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 CD2APQ9Y5K6 639 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 CSADQ9Y600 493 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 IGF1RP08069 1367 aa8.99□□□□□ -0.97
CAPRIN1-208ENST00000530008 CHURC1-FNTBB4DL54 471 aa8.98□□□□□ -0.97
CAPRIN1-208ENST00000530008 LILRB5O75023 590 aa8.98□□□□□ -0.97
CAPRIN1-208ENST00000530008 EPXP11678 715 aa8.98□□□□□ -0.97
CAPRIN1-208ENST00000530008 HP1BP3Q5SSJ5 553 aaPredicted RBP8.98□□□□□ -0.97
CAPRIN1-208ENST00000530008 GPR161Q8N6U8 529 aaKnown RBP8.98□□□□□ -0.97
CAPRIN1-208ENST00000530008 LOC100289279A0A1B0GTE1 492 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 TM4SF5O14894 197 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 ADCY3O60266 1144 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 VIL1P09327 827 aaKnown RBP8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 HCLS1P14317 486 aaPredicted RBP8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 NLRP12P59046 1061 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 SLC7A5Q01650 507 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 LONRF2Q1L5Z9 754 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 MSL1Q68DK7 614 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 LRRC47Q8N1G4 583 aaKnown RBP8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 ACSF2Q96CM8 615 aaPredicted RBP8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 SLC26A8Q96RN1 970 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 WDR18Q9BV38 432 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 WNT10AQ9GZT5 417 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 DDX56Q9NY93 547 aaKnown RBP8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 ZNF214Q9UL59 606 aaPredicted RBP8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 PLAAQ9Y263 795 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 PCDHGC5Q9Y5F6 944 aa8.97□□□□□ -0.97
CAPRIN1-208ENST00000530008 IQCA1LA6NCM1 817 aa8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 SLFN14P0C7P3 912 aa8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 RAG1P15918 1043 aa8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 ETF1P62495 437 aaKnown RBP8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 RING1Q06587 406 aa8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 PLEKHG6Q3KR16 790 aa8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 GNPTABQ3T906 1256 aa8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 C8orf86Q6ZUL3 223 aa8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 ZBTB38Q8NAP3 1195 aaPredicted RBP8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 HIF3AQ9Y2N7 669 aa8.96□□□□□ -0.98
CAPRIN1-208ENST00000530008 M0R082 166 aa8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 AOC2O75106 756 aa8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 POLR2BP30876 1174 aaKnown RBP8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 SETDB1Q15047 1291 aa8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 C21orf62-AS1Q17RA5 79 aa8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 ZC3H12BQ5HYM0 836 aaKnown RBP8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 NOL8Q76FK4 1167 aaKnown RBP8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 KRT26Q7Z3Y9 468 aa8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 GALNT11Q8NCW6 608 aa8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 ZNF417Q8TAU3 575 aa8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 STAG1Q8WVM7 1258 aa8.95□□□□□ -0.98
CAPRIN1-208ENST00000530008 ZNF587Q96SQ5 575 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms