RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 HMGCRP04035 888 aa19.89■□□□□ 0.77
COL16A1-216ENST00000529928 SPP2Q13103 211 aa19.89■□□□□ 0.77
COL16A1-216ENST00000529928 ZNF280CQ8ND82 737 aa19.89■□□□□ 0.77
COL16A1-216ENST00000529928 SLC17A8Q8NDX2 589 aa19.89■□□□□ 0.77
COL16A1-216ENST00000529928 STAP2Q9UGK3 403 aa19.89■□□□□ 0.77
COL16A1-216ENST00000529928 LOC285556D6RIA3 1793 aa19.88■□□□□ 0.77
COL16A1-216ENST00000529928 SOX1O00570 391 aaPredicted RBP19.88■□□□□ 0.77
COL16A1-216ENST00000529928 XAGE2Q96GT9 111 aa19.88■□□□□ 0.77
COL16A1-216ENST00000529928 API5Q9BZZ5 524 aaKnown RBP19.88■□□□□ 0.77
COL16A1-216ENST00000529928 FAM196BA6NMK8 535 aa19.87■□□□□ 0.77
COL16A1-216ENST00000529928 LDHCP07864 332 aa19.87■□□□□ 0.77
COL16A1-216ENST00000529928 GSTO1P78417 241 aa19.87■□□□□ 0.77
COL16A1-216ENST00000529928 DIS3LQ8TF46 1054 aaKnown RBP19.87■□□□□ 0.77
COL16A1-216ENST00000529928 NOB1Q9ULX3 412 aaKnown RBP19.87■□□□□ 0.77
COL16A1-216ENST00000529928 RPTORQ8N122 1335 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 CT47B1P0C2W7 299 aaPredicted RBP19.86■□□□□ 0.77
COL16A1-216ENST00000529928 BMP8BP34820 402 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 CAP2P40123 477 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 HMGCS2P54868 508 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 TFCP2Q12800 502 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 ZNF384Q8TF68 577 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 LRCH3Q96II8 777 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 MEIS3Q99687 375 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 HMX1Q9NP08 348 aaPredicted RBP19.86■□□□□ 0.77
COL16A1-216ENST00000529928 DOCK3Q8IZD9 2030 aa19.86■□□□□ 0.77
COL16A1-216ENST00000529928 ALPK3Q96L96 1907 aa19.85■□□□□ 0.77
COL16A1-216ENST00000529928 USP17L5A8MUK1 530 aa19.85■□□□□ 0.77
COL16A1-216ENST00000529928 SH3D19Q5HYK7 790 aa19.85■□□□□ 0.77
COL16A1-216ENST00000529928 NSUN4Q96CB9 384 aaKnown RBP19.85■□□□□ 0.77
COL16A1-216ENST00000529928 GDF15Q99988 308 aa19.85■□□□□ 0.77
COL16A1-216ENST00000529928 NBPF3Q9H094 633 aa19.85■□□□□ 0.77
COL16A1-216ENST00000529928 ASCC2Q9H1I8 757 aaPredicted RBP19.85■□□□□ 0.77
COL16A1-216ENST00000529928 AS3MTQ9HBK9 375 aa19.85■□□□□ 0.77
COL16A1-216ENST00000529928 HMG20BQ9P0W2 317 aa19.85■□□□□ 0.77
COL16A1-216ENST00000529928 HERC5Q9UII4 1024 aaKnown RBP19.85■□□□□ 0.77
COL16A1-216ENST00000529928 GJD2Q9UKL4 321 aa19.85■□□□□ 0.77
COL16A1-216ENST00000529928 DLL1O00548 723 aa19.84■□□□□ 0.77
COL16A1-216ENST00000529928 SRGAP3O43295 1099 aa19.84■□□□□ 0.77
COL16A1-216ENST00000529928 C7orf61Q8IZ16 206 aa19.84■□□□□ 0.77
COL16A1-216ENST00000529928 SPATA5Q8NB90 893 aa19.84■□□□□ 0.77
COL16A1-216ENST00000529928 NEUROD6Q96NK8 337 aa19.84■□□□□ 0.77
COL16A1-216ENST00000529928 ATAD5Q96QE3 1844 aa19.83■□□□□ 0.77
COL16A1-216ENST00000529928 GNAI3P08754 354 aa19.83■□□□□ 0.77
COL16A1-216ENST00000529928 GORABQ5T7V8 394 aa19.83■□□□□ 0.77
COL16A1-216ENST00000529928 GPR153Q6NV75 609 aa19.83■□□□□ 0.77
COL16A1-216ENST00000529928 CDCA7LQ96GN5 454 aa19.83■□□□□ 0.77
COL16A1-216ENST00000529928 MORF4L1Q9UBU8 362 aa19.83■□□□□ 0.77
COL16A1-216ENST00000529928 MTX1Q13505 466 aa19.82■□□□□ 0.76
COL16A1-216ENST00000529928 PI16Q6UXB8 463 aa19.82■□□□□ 0.76
COL16A1-216ENST00000529928 TRMT2AQ8IZ69 625 aaKnown RBP19.82■□□□□ 0.76
COL16A1-216ENST00000529928 RAI14Q9P0K7 980 aa19.82■□□□□ 0.76
COL16A1-216ENST00000529928 LAMA3Q16787 3333 aa19.82■□□□□ 0.76
COL16A1-216ENST00000529928 ARID4AP29374 1257 aaPredicted RBP19.81■□□□□ 0.76
COL16A1-216ENST00000529928 IRX3P78415 501 aaPredicted RBP19.81■□□□□ 0.76
COL16A1-216ENST00000529928 TRIM32Q13049 653 aa19.81■□□□□ 0.76
COL16A1-216ENST00000529928 RRP1BQ14684 758 aaKnown RBP19.81■□□□□ 0.76
COL16A1-216ENST00000529928 TBC1D9Q6ZT07 1266 aa19.81■□□□□ 0.76
COL16A1-216ENST00000529928 TEX11Q8IYF3 940 aa19.81■□□□□ 0.76
COL16A1-216ENST00000529928 NOL10Q9BSC4 688 aaKnown RBP19.81■□□□□ 0.76
COL16A1-216ENST00000529928 WDR18Q9BV38 432 aa19.81■□□□□ 0.76
COL16A1-216ENST00000529928 DHX36Q9H2U1 1008 aaKnown RBP19.81■□□□□ 0.76
COL16A1-216ENST00000529928 C11orf49Q9H6J7 331 aa19.81■□□□□ 0.76
COL16A1-216ENST00000529928 PI4KBQ9UBF8 816 aa19.81■□□□□ 0.76
COL16A1-216ENST00000529928 OGDHLQ9ULD0 1010 aa19.81■□□□□ 0.76
COL16A1-216ENST00000529928 ZMYND8Q9ULU4 1186 aaPredicted RBP19.81■□□□□ 0.76
COL16A1-216ENST00000529928 ASNSP08243 561 aa19.8■□□□□ 0.76
COL16A1-216ENST00000529928 MNX1P50219 401 aaPredicted RBP19.8■□□□□ 0.76
COL16A1-216ENST00000529928 BACE1P56817 501 aa19.8■□□□□ 0.76
COL16A1-216ENST00000529928 SOCS4Q8WXH5 440 aa19.8■□□□□ 0.76
COL16A1-216ENST00000529928 TRIB2Q92519 343 aa19.8■□□□□ 0.76
COL16A1-216ENST00000529928 TMOD4Q9NZQ9 345 aa19.8■□□□□ 0.76
COL16A1-216ENST00000529928 LRP2BPQ9P2M1 347 aa19.8■□□□□ 0.76
COL16A1-216ENST00000529928 DDX60LQ5H9U9 1706 aaKnown RBP19.79■□□□□ 0.76
COL16A1-216ENST00000529928 XRCC5P13010 732 aaKnown RBP19.79■□□□□ 0.76
COL16A1-216ENST00000529928 HOXA7P31268 230 aaPredicted RBP19.79■□□□□ 0.76
COL16A1-216ENST00000529928 MTMR2Q13614 643 aa19.79■□□□□ 0.76
COL16A1-216ENST00000529928 MAP3K21Q5TCX8 1036 aa19.79■□□□□ 0.76
COL16A1-216ENST00000529928 NUDT12Q9BQG2 462 aa19.79■□□□□ 0.76
COL16A1-216ENST00000529928 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.79■□□□□ 0.76
COL16A1-216ENST00000529928 UQCRFS1P1P0C7P4 283 aa19.78■□□□□ 0.76
COL16A1-216ENST00000529928 PRKAR2AP13861 404 aaKnown RBP19.78■□□□□ 0.76
COL16A1-216ENST00000529928 CYP2B6P20813 491 aa19.78■□□□□ 0.76
COL16A1-216ENST00000529928 LRIT3Q3SXY7 679 aa19.78■□□□□ 0.76
COL16A1-216ENST00000529928 TRMT44Q8IYL2 757 aaKnown RBP19.78■□□□□ 0.76
COL16A1-216ENST00000529928 SH3RF3Q8TEJ3 882 aaPredicted RBP19.78■□□□□ 0.76
COL16A1-216ENST00000529928 ARHGAP45Q92619 1136 aa19.78■□□□□ 0.76
COL16A1-216ENST00000529928 PLXNB2O15031 1838 aa19.78■□□□□ 0.76
COL16A1-216ENST00000529928 C19orf81C9J6K1 198 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 BAG3O95817 575 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 PLCG2P16885 1265 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 SYN1P17600 705 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 MCAMP43121 646 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 HERVK_113P62684 666 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 TDHQ8IZJ6 230 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 DEFB123Q8N688 67 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 GPRC5AQ8NFJ5 357 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 P2RX7Q99572 595 aaKnown RBP19.77■□□□□ 0.76
COL16A1-216ENST00000529928 GINM1Q9NU53 330 aa19.77■□□□□ 0.76
COL16A1-216ENST00000529928 COL6A3P12111 3177 aa19.76■□□□□ 0.75
COL16A1-216ENST00000529928 MAPK4P31152 587 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms