RNA–Protein interactions for RNA: ENST00000528588.5

VPS51-206, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-206ENST00000528588 FRAT1Q92837 279 aaPredicted RBP24.54■■□□□ 1.52
VPS51-206ENST00000528588 FAM163AQ96GL9 167 aaPredicted RBP24.54■■□□□ 1.52
VPS51-206ENST00000528588 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.54■■□□□ 1.52
VPS51-206ENST00000528588 LOC285556D6RIA3 1793 aa24.54■■□□□ 1.52
VPS51-206ENST00000528588 ATAD5Q96QE3 1844 aa24.54■■□□□ 1.52
VPS51-206ENST00000528588 HNRNPUQ00839 825 aaKnown RBP eCLIP24.53■■□□□ 1.52
VPS51-206ENST00000528588 FAM110CQ1W6H9 321 aa24.53■■□□□ 1.52
VPS51-206ENST00000528588 NECAB2Q7Z6G3 386 aa24.53■■□□□ 1.52
VPS51-206ENST00000528588 DIS3LQ8TF46 1054 aaKnown RBP24.53■■□□□ 1.52
VPS51-206ENST00000528588 SPTY2D1Q68D10 685 aaPredicted RBP24.52■■□□□ 1.52
VPS51-206ENST00000528588 MROH7-TTC4A0A0A0MT08 1334 aa24.52■■□□□ 1.52
VPS51-206ENST00000528588 LAMA3Q16787 3333 aa24.52■■□□□ 1.52
VPS51-206ENST00000528588 GNAI2P04899 355 aa24.51■■□□□ 1.51
VPS51-206ENST00000528588 PROCA1Q8NCQ7 364 aaPredicted RBP24.51■■□□□ 1.51
VPS51-206ENST00000528588 PDS5AQ29RF7 1337 aaKnown RBP24.51■■□□□ 1.51
VPS51-206ENST00000528588 COL6A3P12111 3177 aa24.5■■□□□ 1.51
VPS51-206ENST00000528588 FAM196BA6NMK8 535 aa24.5■■□□□ 1.51
VPS51-206ENST00000528588 TBC1D12O60347 775 aa24.5■■□□□ 1.51
VPS51-206ENST00000528588 ZKSCAN2Q63HK3 967 aa24.5■■□□□ 1.51
VPS51-206ENST00000528588 CLUAP1Q96AJ1 413 aa24.5■■□□□ 1.51
VPS51-206ENST00000528588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.5■■□□□ 1.51
VPS51-206ENST00000528588 GPR75-ASB3A0A0A6YYF3 556 aa24.49■■□□□ 1.51
VPS51-206ENST00000528588 HMGCRP04035 888 aa24.49■■□□□ 1.51
VPS51-206ENST00000528588 GCLCP48506 637 aaPredicted RBP24.49■■□□□ 1.51
VPS51-206ENST00000528588 RHBDL3P58872 404 aa24.49■■□□□ 1.51
VPS51-206ENST00000528588 TIMM10P62072 90 aa24.49■■□□□ 1.51
VPS51-206ENST00000528588 SPP2Q13103 211 aa24.49■■□□□ 1.51
VPS51-206ENST00000528588 C7orf61Q8IZ16 206 aa24.49■■□□□ 1.51
VPS51-206ENST00000528588 ANKLE1Q8NAG6 615 aa24.49■■□□□ 1.51
VPS51-206ENST00000528588 AKAP2Q9Y2D5 859 aa24.49■■□□□ 1.51
VPS51-206ENST00000528588 MECOMQ03112 1051 aa24.48■■□□□ 1.51
VPS51-206ENST00000528588 TFCP2Q12800 502 aa24.48■■□□□ 1.51
VPS51-206ENST00000528588 DDX60LQ5H9U9 1706 aaKnown RBP24.48■■□□□ 1.51
VPS51-206ENST00000528588 ERICH6Q7L0X2 663 aa24.48■■□□□ 1.51
VPS51-206ENST00000528588 TMEM57Q8N5G2 664 aa24.48■■□□□ 1.51
VPS51-206ENST00000528588 OSBPL5Q9H0X9 879 aaPredicted RBP24.48■■□□□ 1.51
VPS51-206ENST00000528588 A0A1B0GUL7 405 aa24.47■■□□□ 1.51
VPS51-206ENST00000528588 NPM3O75607 178 aaKnown RBP24.47■■□□□ 1.51
VPS51-206ENST00000528588 ZNF280CQ8ND82 737 aa24.47■■□□□ 1.51
VPS51-206ENST00000528588 GDF15Q99988 308 aa24.47■■□□□ 1.51
VPS51-206ENST00000528588 ZMYND8Q9ULU4 1186 aaPredicted RBP24.47■■□□□ 1.51
VPS51-206ENST00000528588 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.47■■□□□ 1.51
VPS51-206ENST00000528588 PLXNB2O15031 1838 aa24.47■■□□□ 1.51
VPS51-206ENST00000528588 PNMA6EA0A0J9YXQ4 647 aa24.46■■□□□ 1.51
VPS51-206ENST00000528588 BMP8BP34820 402 aa24.46■■□□□ 1.51
VPS51-206ENST00000528588 HMGCS2P54868 508 aa24.46■■□□□ 1.51
VPS51-206ENST00000528588 PABPC4Q13310 644 aaKnown RBP eCLIP24.46■■□□□ 1.51
VPS51-206ENST00000528588 ZNF384Q8TF68 577 aa24.46■■□□□ 1.51
VPS51-206ENST00000528588 XAGE2Q96GT9 111 aa24.46■■□□□ 1.51
VPS51-206ENST00000528588 HMX1Q9NP08 348 aaPredicted RBP24.46■■□□□ 1.51
VPS51-206ENST00000528588 RPTORQ8N122 1335 aa24.45■■□□□ 1.5
VPS51-206ENST00000528588 TRIM32Q13049 653 aa24.45■■□□□ 1.5
VPS51-206ENST00000528588 MVPQ14764 893 aaKnown RBP24.45■■□□□ 1.5
VPS51-206ENST00000528588 TBC1D2Q9BYX2 928 aa24.45■■□□□ 1.5
VPS51-206ENST00000528588 NBPF3Q9H094 633 aa24.45■■□□□ 1.5
VPS51-206ENST00000528588 ASCC2Q9H1I8 757 aaPredicted RBP24.45■■□□□ 1.5
VPS51-206ENST00000528588 GJD2Q9UKL4 321 aa24.45■■□□□ 1.5
VPS51-206ENST00000528588 COL2A1P02458 1487 aaPredicted RBP24.45■■□□□ 1.5
VPS51-206ENST00000528588 ZBED9Q6R2W3 1325 aa24.43■■□□□ 1.5
VPS51-206ENST00000528588 CAP2P40123 477 aa24.43■■□□□ 1.5
VPS51-206ENST00000528588 USP17L5A8MUK1 530 aa24.42■■□□□ 1.5
VPS51-206ENST00000528588 MAP4K4O95819 1239 aaPredicted RBP24.42■■□□□ 1.5
VPS51-206ENST00000528588 LDHCP07864 332 aa24.42■■□□□ 1.5
VPS51-206ENST00000528588 SYN1P17600 705 aa24.42■■□□□ 1.5
VPS51-206ENST00000528588 GSTO1P78417 241 aa24.42■■□□□ 1.5
VPS51-206ENST00000528588 POLA2Q14181 598 aa24.42■■□□□ 1.5
VPS51-206ENST00000528588 RRP1BQ14684 758 aaKnown RBP24.42■■□□□ 1.5
VPS51-206ENST00000528588 C11orf49Q9H6J7 331 aa24.42■■□□□ 1.5
VPS51-206ENST00000528588 MNX1P50219 401 aaPredicted RBP24.41■■□□□ 1.5
VPS51-206ENST00000528588 G3BP1Q13283 466 aaKnown RBP eCLIP24.41■■□□□ 1.5
VPS51-206ENST00000528588 SH3D19Q5HYK7 790 aa24.41■■□□□ 1.5
VPS51-206ENST00000528588 GPR153Q6NV75 609 aa24.41■■□□□ 1.5
VPS51-206ENST00000528588 TRIB2Q92519 343 aa24.41■■□□□ 1.5
VPS51-206ENST00000528588 NSUN4Q96CB9 384 aaKnown RBP24.41■■□□□ 1.5
VPS51-206ENST00000528588 AS3MTQ9HBK9 375 aa24.41■■□□□ 1.5
VPS51-206ENST00000528588 HMG20BQ9P0W2 317 aa24.41■■□□□ 1.5
VPS51-206ENST00000528588 MORF4L1Q9UBU8 362 aa24.41■■□□□ 1.5
VPS51-206ENST00000528588 TBC1D9Q6ZT07 1266 aa24.4■■□□□ 1.5
VPS51-206ENST00000528588 DEFB123Q8N688 67 aa24.4■■□□□ 1.5
VPS51-206ENST00000528588 SSH3Q8TE77 659 aa24.4■■□□□ 1.5
VPS51-206ENST00000528588 NEUROD6Q96NK8 337 aa24.4■■□□□ 1.5
VPS51-206ENST00000528588 A0A0C4DFX4 3053 aa24.39■■□□□ 1.5
VPS51-206ENST00000528588 CYP2B6P20813 491 aa24.39■■□□□ 1.49
VPS51-206ENST00000528588 MAGEA10P43363 369 aaPredicted RBP24.39■■□□□ 1.49
VPS51-206ENST00000528588 IRX3P78415 501 aaPredicted RBP24.39■■□□□ 1.49
VPS51-206ENST00000528588 ATP8B2P98198 1209 aa24.39■■□□□ 1.49
VPS51-206ENST00000528588 PI16Q6UXB8 463 aa24.39■■□□□ 1.49
VPS51-206ENST00000528588 TEX11Q8IYF3 940 aa24.39■■□□□ 1.49
VPS51-206ENST00000528588 SPATA5Q8NB90 893 aa24.39■■□□□ 1.49
VPS51-206ENST00000528588 RAI14Q9P0K7 980 aa24.39■■□□□ 1.49
VPS51-206ENST00000528588 HERC5Q9UII4 1024 aaKnown RBP24.39■■□□□ 1.49
VPS51-206ENST00000528588 OGDHLQ9ULD0 1010 aa24.39■■□□□ 1.49
VPS51-206ENST00000528588 SIPA1L1O43166 1804 aa24.39■■□□□ 1.49
VPS51-206ENST00000528588 CUL9Q8IWT3 2517 aa24.38■■□□□ 1.49
VPS51-206ENST00000528588 RLBP1P12271 317 aa24.38■■□□□ 1.49
VPS51-206ENST00000528588 MTMR2Q13614 643 aa24.38■■□□□ 1.49
VPS51-206ENST00000528588 FTSJ3Q8IY81 847 aaKnown RBP24.38■■□□□ 1.49
VPS51-206ENST00000528588 PRKAR2AP13861 404 aaKnown RBP24.37■■□□□ 1.49
VPS51-206ENST00000528588 ARID4AP29374 1257 aaPredicted RBP24.37■■□□□ 1.49
VPS51-206ENST00000528588 LRIT3Q3SXY7 679 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms