RNA–Protein interactions for RNA: ENST00000528575.1

YIF1A-212, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 3

Gene YIF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-212ENST00000528575 OSBPL5Q9H0X9 879 aaPredicted RBP22.62■■□□□ 1.21
YIF1A-212ENST00000528575 DDX4Q9NQI0 724 aaKnown RBP22.62■■□□□ 1.21
YIF1A-212ENST00000528575 RBBP6Q7Z6E9 1792 aaKnown RBP22.62■■□□□ 1.21
YIF1A-212ENST00000528575 KIAA0100Q14667 2235 aaKnown RBP22.62■■□□□ 1.21
YIF1A-212ENST00000528575 SLC34A2O95436 690 aa22.61■■□□□ 1.21
YIF1A-212ENST00000528575 PDE6AP16499 860 aa22.61■■□□□ 1.21
YIF1A-212ENST00000528575 CTGFP29279 349 aa22.61■■□□□ 1.21
YIF1A-212ENST00000528575 SP3Q02447 781 aa22.61■■□□□ 1.21
YIF1A-212ENST00000528575 ADGRA1Q86SQ6 560 aa22.61■■□□□ 1.21
YIF1A-212ENST00000528575 ZSCAN29Q8IWY8 852 aaPredicted RBP22.61■■□□□ 1.21
YIF1A-212ENST00000528575 SH3RF3Q8TEJ3 882 aaPredicted RBP22.61■■□□□ 1.21
YIF1A-212ENST00000528575 ARHGAP39Q9C0H5 1083 aa22.61■■□□□ 1.21
YIF1A-212ENST00000528575 NDUFB9Q9Y6M9 179 aa22.61■■□□□ 1.21
YIF1A-212ENST00000528575 PHF20L1A8MW92 1017 aa22.6■■□□□ 1.21
YIF1A-212ENST00000528575 MX1P20591 662 aa22.6■■□□□ 1.21
YIF1A-212ENST00000528575 PPIL2Q13356 520 aa22.6■■□□□ 1.21
YIF1A-212ENST00000528575 PICALMQ13492 652 aa22.6■■□□□ 1.21
YIF1A-212ENST00000528575 UBE3CQ15386 1083 aa22.6■■□□□ 1.21
YIF1A-212ENST00000528575 TICAM2Q86XR7 235 aa22.6■■□□□ 1.21
YIF1A-212ENST00000528575 BCL11AQ9H165 835 aa22.6■■□□□ 1.21
YIF1A-212ENST00000528575 ADGRA2Q96PE1 1338 aa22.59■■□□□ 1.21
YIF1A-212ENST00000528575 TAF1CQ15572 869 aaPredicted RBP22.59■■□□□ 1.21
YIF1A-212ENST00000528575 OTUD7BQ6GQQ9 843 aa22.59■■□□□ 1.21
YIF1A-212ENST00000528575 ARMC5Q96C12 935 aa22.59■■□□□ 1.21
YIF1A-212ENST00000528575 ERO1AQ96HE7 468 aa22.59■■□□□ 1.21
YIF1A-212ENST00000528575 HERC5Q9UII4 1024 aaKnown RBP22.59■■□□□ 1.21
YIF1A-212ENST00000528575 TAOK2Q9UL54 1235 aa22.59■■□□□ 1.21
YIF1A-212ENST00000528575 SALL3Q9BXA9 1300 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 TCRBV5S4A2TA0A5A2 114 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 ZFYP08048 801 aaPredicted RBP22.58■■□□□ 1.21
YIF1A-212ENST00000528575 ADD2P35612 726 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 NOL9Q5SY16 702 aaKnown RBP22.58■■□□□ 1.21
YIF1A-212ENST00000528575 KBTBD3Q8NAB2 608 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 RIOK1Q9BRS2 568 aaKnown RBP22.58■■□□□ 1.21
YIF1A-212ENST00000528575 EFCC1Q9HA90 598 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 PI4KBQ9UBF8 816 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 STAP2Q9UGK3 403 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 KCNH4Q9UQ05 1017 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 PHIPQ8WWQ0 1821 aa22.58■■□□□ 1.21
YIF1A-212ENST00000528575 MYO5AQ9Y4I1 1855 aaKnown RBP22.58■■□□□ 1.2
YIF1A-212ENST00000528575 FLT1P17948 1338 aa22.57■■□□□ 1.2
YIF1A-212ENST00000528575 ZNF532Q9HCE3 1301 aa22.57■■□□□ 1.2
YIF1A-212ENST00000528575 MAGEB6P1A0A0J9YX57 407 aa22.57■■□□□ 1.2
YIF1A-212ENST00000528575 DDTLA6NHG4 134 aaPredicted RBP22.57■■□□□ 1.2
YIF1A-212ENST00000528575 TGFBRAP1Q8WUH2 860 aa22.57■■□□□ 1.2
YIF1A-212ENST00000528575 AK9Q5TCS8 1911 aa22.57■■□□□ 1.2
YIF1A-212ENST00000528575 TLR2O60603 784 aa22.56■■□□□ 1.2
YIF1A-212ENST00000528575 CETPP11597 493 aa22.56■■□□□ 1.2
YIF1A-212ENST00000528575 PPATQ06203 517 aa22.56■■□□□ 1.2
YIF1A-212ENST00000528575 PI4K2BQ8TCG2 481 aa22.56■■□□□ 1.2
YIF1A-212ENST00000528575 CRNKL1Q9BZJ0 848 aaKnown RBP22.56■■□□□ 1.2
YIF1A-212ENST00000528575 FOCADQ5VW36 1801 aa22.56■■□□□ 1.2
YIF1A-212ENST00000528575 PTPRFP10586 1907 aa22.55■■□□□ 1.2
YIF1A-212ENST00000528575 NUCB1Q02818 461 aa22.55■■□□□ 1.2
YIF1A-212ENST00000528575 SNAPC2Q13487 334 aa22.55■■□□□ 1.2
YIF1A-212ENST00000528575 METTL16Q86W50 562 aaKnown RBP22.55■■□□□ 1.2
YIF1A-212ENST00000528575 FOXP4Q8IVH2 680 aaPredicted RBP22.55■■□□□ 1.2
YIF1A-212ENST00000528575 MIGA1Q8NAN2 632 aa22.55■■□□□ 1.2
YIF1A-212ENST00000528575 EDC3Q96F86 508 aaKnown RBP22.55■■□□□ 1.2
YIF1A-212ENST00000528575 ZFYVE28Q9HCC9 887 aa22.55■■□□□ 1.2
YIF1A-212ENST00000528575 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.55■■□□□ 1.2
YIF1A-212ENST00000528575 PTCH2Q9Y6C5 1203 aa22.55■■□□□ 1.2
YIF1A-212ENST00000528575 CTNND1O60716 968 aaKnown RBP22.54■■□□□ 1.2
YIF1A-212ENST00000528575 IGHDP01880 384 aa22.54■■□□□ 1.2
YIF1A-212ENST00000528575 HLA-DOAP06340 250 aa22.54■■□□□ 1.2
YIF1A-212ENST00000528575 USP5P45974 858 aa22.54■■□□□ 1.2
YIF1A-212ENST00000528575 GPAT2Q6NUI2 795 aa22.54■■□□□ 1.2
YIF1A-212ENST00000528575 C17orf99Q6UX52 265 aa22.54■■□□□ 1.2
YIF1A-212ENST00000528575 CHD1LQ86WJ1 897 aa22.54■■□□□ 1.2
YIF1A-212ENST00000528575 SIPA1L1O43166 1804 aa22.53■■□□□ 1.2
YIF1A-212ENST00000528575 DYNLL1P63167 89 aaKnown RBP22.53■■□□□ 1.2
YIF1A-212ENST00000528575 ZNF333Q96JL9 665 aa22.53■■□□□ 1.2
YIF1A-212ENST00000528575 TBC1D2Q9BYX2 928 aa22.53■■□□□ 1.2
YIF1A-212ENST00000528575 ZCCHC17Q9NP64 241 aaKnown RBP22.53■■□□□ 1.2
YIF1A-212ENST00000528575 GINM1Q9NU53 330 aa22.53■■□□□ 1.2
YIF1A-212ENST00000528575 PDE1AP54750 535 aa22.52■■□□□ 1.2
YIF1A-212ENST00000528575 LACTBP83111 547 aaPredicted RBP22.52■■□□□ 1.2
YIF1A-212ENST00000528575 TTC6Q86TZ1 520 aa22.52■■□□□ 1.2
YIF1A-212ENST00000528575 MAPKAPK5Q8IW41 473 aa22.52■■□□□ 1.2
YIF1A-212ENST00000528575 SCYL3Q8IZE3 742 aa22.52■■□□□ 1.2
YIF1A-212ENST00000528575 EHD4Q9H223 541 aa22.52■■□□□ 1.2
YIF1A-212ENST00000528575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.52■■□□□ 1.2
YIF1A-212ENST00000528575 ATP8A2Q9NTI2 1148 aa22.52■■□□□ 1.2
YIF1A-212ENST00000528575 EN2P19622 333 aaPredicted RBP22.51■■□□□ 1.19
YIF1A-212ENST00000528575 OSBPL3Q9H4L5 887 aa22.51■■□□□ 1.19
YIF1A-212ENST00000528575 PICK1Q9NRD5 415 aa22.51■■□□□ 1.19
YIF1A-212ENST00000528575 DOCK1Q14185 1865 aa22.51■■□□□ 1.19
YIF1A-212ENST00000528575 RRP1BQ14684 758 aaKnown RBP22.5■■□□□ 1.19
YIF1A-212ENST00000528575 ANKRD23Q86SG2 305 aa22.5■■□□□ 1.19
YIF1A-212ENST00000528575 CCDC84Q86UT8 332 aaPredicted RBP22.5■■□□□ 1.19
YIF1A-212ENST00000528575 OTUD7AQ8TE49 926 aaPredicted RBP22.5■■□□□ 1.19
YIF1A-212ENST00000528575 APPBP2Q92624 585 aa22.5■■□□□ 1.19
YIF1A-212ENST00000528575 EVI5LQ96CN4 794 aa22.5■■□□□ 1.19
YIF1A-212ENST00000528575 DDRGK1Q96HY6 314 aa22.5■■□□□ 1.19
YIF1A-212ENST00000528575 TRIM34Q9BYJ4 488 aa22.5■■□□□ 1.19
YIF1A-212ENST00000528575 LNPKQ9C0E8 428 aa22.5■■□□□ 1.19
YIF1A-212ENST00000528575 CPA4Q9UI42 421 aa22.5■■□□□ 1.19
YIF1A-212ENST00000528575 MYH7P12883 1935 aa22.5■■□□□ 1.19
YIF1A-212ENST00000528575 CDK5RAP2Q96SN8 1893 aa22.49■■□□□ 1.19
YIF1A-212ENST00000528575 PDHXO00330 501 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms