RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ETF1P62495 437 aaKnown RBP9.49□□□□□ -0.89
PCF11-202ENST00000528336 MAP7Q14244 749 aa9.49□□□□□ -0.89
PCF11-202ENST00000528336 CDC37L1Q7L3B6 337 aa9.49□□□□□ -0.89
PCF11-202ENST00000528336 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.49□□□□□ -0.89
PCF11-202ENST00000528336 EZH1Q92800 747 aaPredicted RBP9.49□□□□□ -0.89
PCF11-202ENST00000528336 UBP1Q9NZI7 540 aa9.49□□□□□ -0.89
PCF11-202ENST00000528336 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.49□□□□□ -0.89
PCF11-202ENST00000528336 FANCGO15287 622 aa9.48□□□□□ -0.89
PCF11-202ENST00000528336 DYNC1LI2O43237 492 aaPredicted RBP9.48□□□□□ -0.89
PCF11-202ENST00000528336 GRK4P32298 578 aa9.48□□□□□ -0.89
PCF11-202ENST00000528336 KCNQ5Q9NR82 932 aa9.48□□□□□ -0.89
PCF11-202ENST00000528336 PCOLCE2Q9UKZ9 415 aa9.48□□□□□ -0.89
PCF11-202ENST00000528336 ERCC5P28715 1186 aaPredicted RBP9.47□□□□□ -0.89
PCF11-202ENST00000528336 CRKP46108 304 aa9.47□□□□□ -0.89
PCF11-202ENST00000528336 UBE3DQ7Z6J8 389 aa9.47□□□□□ -0.89
PCF11-202ENST00000528336 WNT10AQ9GZT5 417 aa9.47□□□□□ -0.89
PCF11-202ENST00000528336 GRIN3BO60391 1043 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 FSTP19883 344 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 NTF4P34130 210 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 APOBRQ0VD83 1088 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 SEZ6Q53EL9 994 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 FBXL6Q8N531 539 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 ZNF507Q8TCN5 953 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.9
PCF11-202ENST00000528336 MFSD14AQ96MC6 490 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 CORINQ9Y5Q5 1042 aa9.46□□□□□ -0.9
PCF11-202ENST00000528336 RAD51AP2Q09MP3 1159 aa9.45□□□□□ -0.9
PCF11-202ENST00000528336 MPP2Q14168 576 aa9.45□□□□□ -0.9
PCF11-202ENST00000528336 CWF19L2Q2TBE0 894 aaKnown RBP9.45□□□□□ -0.9
PCF11-202ENST00000528336 RNF43Q68DV7 783 aa9.45□□□□□ -0.9
PCF11-202ENST00000528336 REC114Q7Z4M0 266 aa9.45□□□□□ -0.9
PCF11-202ENST00000528336 NPM2Q86SE8 214 aaKnown RBP9.45□□□□□ -0.9
PCF11-202ENST00000528336 ACBD3Q9H3P7 528 aa9.45□□□□□ -0.9
PCF11-202ENST00000528336 PRKAG2Q9UGJ0 569 aa9.45□□□□□ -0.9
PCF11-202ENST00000528336 ROBO2Q9HCK4 1378 aa9.45□□□□□ -0.9
PCF11-202ENST00000528336 PGRP06401 933 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 PAK2Q13177 524 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 CDK5R2Q13319 367 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 NKD1Q969G9 470 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 TBC1D32Q96NH3 1257 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 NT5C1AQ9BXI3 368 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 TGIF2Q9GZN2 237 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 CCSER2Q9H7U1 834 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 FBRSQ9HAH7 460 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 BRMS1Q9HCU9 246 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 C1GALT1Q9NS00 363 aa9.44□□□□□ -0.9
PCF11-202ENST00000528336 POLR3KQ9Y2Y1 108 aaPredicted RBP9.44□□□□□ -0.9
PCF11-202ENST00000528336 K7ELQ4 463 aaPredicted RBP9.43□□□□□ -0.9
PCF11-202ENST00000528336 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 MCM4P33991 863 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 ADMP35318 185 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 PDE4BQ07343 736 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 NFIAQ12857 509 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 PRSS36Q5K4E3 855 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 SEZ6L2Q6UXD5 910 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 SHISA5Q8N114 240 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 TACC3Q9Y6A5 838 aa9.43□□□□□ -0.9
PCF11-202ENST00000528336 PLCG1P19174 1290 aa9.42□□□□□ -0.9
PCF11-202ENST00000528336 HID1Q8IV36 788 aa9.42□□□□□ -0.9
PCF11-202ENST00000528336 KCT2Q8NC54 265 aa9.42□□□□□ -0.9
PCF11-202ENST00000528336 IGSF5Q9NSI5 407 aa9.42□□□□□ -0.9
PCF11-202ENST00000528336 WDR64B1ANS9 1081 aa9.41□□□□□ -0.9
PCF11-202ENST00000528336 TNNI2P48788 182 aa9.41□□□□□ -0.9
PCF11-202ENST00000528336 NKG7Q16617 165 aa9.41□□□□□ -0.9
PCF11-202ENST00000528336 DBNDD2Q9BQY9 259 aa9.41□□□□□ -0.9
PCF11-202ENST00000528336 LRRC3Q9BY71 257 aa9.41□□□□□ -0.9
PCF11-202ENST00000528336 GK5Q6ZS86 529 aa9.4□□□□□ -0.9
PCF11-202ENST00000528336 ZAR1Q86SH2 424 aa9.4□□□□□ -0.9
PCF11-202ENST00000528336 TJP2Q9UDY2 1190 aa9.4□□□□□ -0.9
PCF11-202ENST00000528336 INPP5FQ9Y2H2 1132 aa9.4□□□□□ -0.9
PCF11-202ENST00000528336 PCDHB14Q9Y5E9 798 aa9.4□□□□□ -0.9
PCF11-202ENST00000528336 FAM170BA6NMN3 283 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 GSC2O15499 205 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 HTR3BO95264 441 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 F13BP05160 661 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 SLBPQ14493 270 aaKnown RBP eCLIP9.39□□□□□ -0.91
PCF11-202ENST00000528336 ARMCX6Q7L4S7 300 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 SHKBP1Q8TBC3 707 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 XAGE3Q8WTP9 111 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 GATA6Q92908 595 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 DPH2Q9BQC3 489 aaPredicted RBP9.39□□□□□ -0.91
PCF11-202ENST00000528336 ATG3Q9NT62 314 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 REV1Q9UBZ9 1251 aa9.39□□□□□ -0.91
PCF11-202ENST00000528336 FAM87AP0C7U9 286 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 CLCQ05315 142 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 SLITRK4Q8IW52 837 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 TOP6BLQ8N6T0 577 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 GIMAP7Q8NHV1 300 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 ACSF2Q96CM8 615 aaPredicted RBP9.38□□□□□ -0.91
PCF11-202ENST00000528336 GPRASP2Q96D09 838 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 TMEM87BQ96K49 555 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 FOXQ1Q9C009 403 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 CAPN10Q9HC96 672 aa9.38□□□□□ -0.91
PCF11-202ENST00000528336 UPK3BL1B0FP48 263 aa9.37□□□□□ -0.91
PCF11-202ENST00000528336 UPK3BL2E5RIL1 263 aa9.37□□□□□ -0.91
PCF11-202ENST00000528336 LEFTY1O75610 366 aa9.37□□□□□ -0.91
PCF11-202ENST00000528336 ITGB7P26010 798 aa9.37□□□□□ -0.91
PCF11-202ENST00000528336 ZNF165P49910 485 aa9.37□□□□□ -0.91
PCF11-202ENST00000528336 PRAMEF13Q5VWM6 474 aa9.37□□□□□ -0.91
PCF11-202ENST00000528336 PSMG3-AS1Q96PY0 264 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms