RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 PDE6AP16499 860 aa40.11■■■■■ 4.01
SSSCA1-205ENST00000527920 HAUS7Q99871 368 aa40.11■■■■■ 4.01
SSSCA1-205ENST00000527920 TLR2O60603 784 aa40.1■■■■■ 4.01
SSSCA1-205ENST00000527920 SLC9C2Q5TAH2 1124 aa40.1■■■■■ 4.01
SSSCA1-205ENST00000527920 FOXP4Q8IVH2 680 aaPredicted RBP40.1■■■■■ 4.01
SSSCA1-205ENST00000527920 PAG1Q9NWQ8 432 aa40.1■■■■■ 4.01
SSSCA1-205ENST00000527920 CDK5RAP2Q96SN8 1893 aa40.09■■■■■ 4.01
SSSCA1-205ENST00000527920 A0A0G2JLL6 359 aaPredicted RBP40.09■■■■■ 4.01
SSSCA1-205ENST00000527920 FAM196BA6NMK8 535 aa40.09■■■■■ 4.01
SSSCA1-205ENST00000527920 FBXO46Q6PJ61 603 aaPredicted RBP40.09■■■■■ 4.01
SSSCA1-205ENST00000527920 PRRT2Q7Z6L0 340 aaPredicted RBP40.09■■■■■ 4.01
SSSCA1-205ENST00000527920 RIOK1Q9BRS2 568 aaKnown RBP40.09■■■■■ 4.01
SSSCA1-205ENST00000527920 BCL11AQ9H165 835 aa40.09■■■■■ 4.01
SSSCA1-205ENST00000527920 PCDHB15Q9Y5E8 787 aa40.09■■■■■ 4.01
SSSCA1-205ENST00000527920 CAP2P40123 477 aa40.08■■■■■ 4.01
SSSCA1-205ENST00000527920 TBC1D2Q9BYX2 928 aa40.08■■■■■ 4.01
SSSCA1-205ENST00000527920 BOLA2Q9H3K6 86 aa40.08■■■■■ 4.01
SSSCA1-205ENST00000527920 SMARCA5O60264 1052 aaPredicted RBP40.07■■■■■ 4.01
SSSCA1-205ENST00000527920 FASTKD5Q7L8L6 764 aaKnown RBP40.07■■■■■ 4.01
SSSCA1-205ENST00000527920 PALD1Q9ULE6 856 aa40.07■■■■■ 4.01
SSSCA1-205ENST00000527920 HLA-DOAP06340 250 aa40.06■■■■■ 4
SSSCA1-205ENST00000527920 OTOP1Q7RTM1 612 aa40.06■■■■■ 4
SSSCA1-205ENST00000527920 SIPA1L1O43166 1804 aa40.05■■■■■ 4
SSSCA1-205ENST00000527920 TCRBV5S4A2TA0A5A2 114 aa40.05■■■■■ 4
SSSCA1-205ENST00000527920 PDHXO00330 501 aa40.05■■■■■ 4
SSSCA1-205ENST00000527920 USP5P45974 858 aa40.05■■■■■ 4
SSSCA1-205ENST00000527920 HPS5Q9UPZ3 1129 aa40.05■■■■■ 4
SSSCA1-205ENST00000527920 TRIM17Q9Y577 477 aa40.05■■■■■ 4
SSSCA1-205ENST00000527920 MAGEB6P1A0A0J9YX57 407 aa40.04■■■■■ 4
SSSCA1-205ENST00000527920 CD99L2Q8TCZ2 262 aa40.04■■■■■ 4
SSSCA1-205ENST00000527920 EDC3Q96F86 508 aaKnown RBP40.04■■■■■ 4
SSSCA1-205ENST00000527920 DNAJC18Q9H819 358 aa40.04■■■■■ 4
SSSCA1-205ENST00000527920 ZNF532Q9HCE3 1301 aa40.04■■■■■ 4
SSSCA1-205ENST00000527920 GPAT2Q6NUI2 795 aa40.03■■■■■ 4
SSSCA1-205ENST00000527920 DDX24Q9GZR7 859 aaKnown RBP eCLIP40.03■■■■■ 4
SSSCA1-205ENST00000527920 ECHDC1Q9NTX5 307 aa40.03■■■■■ 4
SSSCA1-205ENST00000527920 GINM1Q9NU53 330 aa40.03■■■■■ 4
SSSCA1-205ENST00000527920 RRP1BQ14684 758 aaKnown RBP40.02■■■■■ 4
SSSCA1-205ENST00000527920 ARHGEF6Q15052 776 aa40.02■■■■■ 4
SSSCA1-205ENST00000527920 CRACR2BQ8N4Y2 399 aaPredicted RBP40.02■■■■■ 4
SSSCA1-205ENST00000527920 TRIM34Q9BYJ4 488 aa40.02■■■■■ 4
SSSCA1-205ENST00000527920 SAP30BPQ9UHR5 308 aaKnown RBP40.02■■■■■ 4
SSSCA1-205ENST00000527920 SLC45A1Q9Y2W3 748 aa40.02■■■■■ 4
SSSCA1-205ENST00000527920 PHIPQ8WWQ0 1821 aa40.01■■■■■ 4
SSSCA1-205ENST00000527920 CRBNQ96SW2 442 aa40.01■■■■■ 4
SSSCA1-205ENST00000527920 EHD4Q9H223 541 aa40.01■■■■■ 4
SSSCA1-205ENST00000527920 EFCC1Q9HA90 598 aa40.01■■■■■ 4
SSSCA1-205ENST00000527920 ADGRA2Q96PE1 1338 aa40■■■■□ 3.99
SSSCA1-205ENST00000527920 GPATCH3Q96I76 525 aa40■■■■□ 3.99
SSSCA1-205ENST00000527920 PARK7Q99497 189 aaKnown RBP40■■■■□ 3.99
SSSCA1-205ENST00000527920 CRNKL1Q9BZJ0 848 aaKnown RBP40■■■■□ 3.99
SSSCA1-205ENST00000527920 TRIM75PA6NK02 468 aa39.99■■■■□ 3.99
SSSCA1-205ENST00000527920 ADD2P35612 726 aa39.99■■■■□ 3.99
SSSCA1-205ENST00000527920 C17orf99Q6UX52 265 aa39.99■■■■□ 3.99
SSSCA1-205ENST00000527920 FRMD4AQ9P2Q2 1039 aaPredicted RBP39.99■■■■□ 3.99
SSSCA1-205ENST00000527920 USP17L5A8MUK1 530 aa39.98■■■■□ 3.99
SSSCA1-205ENST00000527920 ASNSP08243 561 aa39.98■■■■□ 3.99
SSSCA1-205ENST00000527920 RGS19P49795 217 aa39.98■■■■□ 3.99
SSSCA1-205ENST00000527920 ZNF280CQ8ND82 737 aa39.98■■■■□ 3.99
SSSCA1-205ENST00000527920 AAMPQ13685 434 aa39.97■■■■□ 3.99
SSSCA1-205ENST00000527920 TTC6Q86TZ1 520 aa39.97■■■■□ 3.99
SSSCA1-205ENST00000527920 CCDC84Q86UT8 332 aaPredicted RBP39.97■■■■□ 3.99
SSSCA1-205ENST00000527920 AS3MTQ9HBK9 375 aa39.96■■■■□ 3.99
SSSCA1-205ENST00000527920 SERPINB13Q9UIV8 391 aa39.96■■■■□ 3.99
SSSCA1-205ENST00000527920 PTPRFP10586 1907 aa39.96■■■■□ 3.99
SSSCA1-205ENST00000527920 LACTBP83111 547 aaPredicted RBP39.95■■■■□ 3.99
SSSCA1-205ENST00000527920 CAP1Q01518 475 aa39.95■■■■□ 3.99
SSSCA1-205ENST00000527920 UBE3CQ15386 1083 aa39.95■■■■□ 3.99
SSSCA1-205ENST00000527920 GADL1Q6ZQY3 521 aa39.95■■■■□ 3.99
SSSCA1-205ENST00000527920 PROCA1Q8NCQ7 364 aaPredicted RBP39.95■■■■□ 3.99
SSSCA1-205ENST00000527920 WDR18Q9BV38 432 aa39.95■■■■□ 3.99
SSSCA1-205ENST00000527920 PTPN22Q9Y2R2 807 aa39.95■■■■□ 3.99
SSSCA1-205ENST00000527920 SPP2Q13103 211 aa39.94■■■■□ 3.98
SSSCA1-205ENST00000527920 ZSCAN25Q6NSZ9 544 aa39.94■■■■□ 3.98
SSSCA1-205ENST00000527920 AGTPBP1Q9UPW5 1226 aa39.94■■■■□ 3.98
SSSCA1-205ENST00000527920 DDX60LQ5H9U9 1706 aaKnown RBP39.94■■■■□ 3.98
SSSCA1-205ENST00000527920 ATAD5Q96QE3 1844 aa39.93■■■■□ 3.98
SSSCA1-205ENST00000527920 MYH1P12882 1939 aa39.93■■■■□ 3.98
SSSCA1-205ENST00000527920 KIF22Q14807 665 aa39.93■■■■□ 3.98
SSSCA1-205ENST00000527920 TATDN1Q6P1N9 297 aa39.92■■■■□ 3.98
SSSCA1-205ENST00000527920 LCORLQ8N3X6 602 aa39.92■■■■□ 3.98
SSSCA1-205ENST00000527920 GNRH1P01148 92 aa39.91■■■■□ 3.98
SSSCA1-205ENST00000527920 SH3D19Q5HYK7 790 aa39.91■■■■□ 3.98
SSSCA1-205ENST00000527920 CPA4Q9UI42 421 aa39.91■■■■□ 3.98
SSSCA1-205ENST00000527920 ZBTB21Q9ULJ3 1066 aa39.91■■■■□ 3.98
SSSCA1-205ENST00000527920 HDAC1Q13547 482 aaPredicted RBP39.9■■■■□ 3.98
SSSCA1-205ENST00000527920 TAOK2Q9UL54 1235 aa39.9■■■■□ 3.98
SSSCA1-205ENST00000527920 HTTP42858 3142 aa39.9■■■■□ 3.98
SSSCA1-205ENST00000527920 TTC41PQ6P2S7 1318 aa39.9■■■■□ 3.98
SSSCA1-205ENST00000527920 CYP2C8P10632 490 aa39.89■■■■□ 3.98
SSSCA1-205ENST00000527920 JAG1P78504 1218 aa39.89■■■■□ 3.98
SSSCA1-205ENST00000527920 SLC4A8Q2Y0W8 1093 aa39.89■■■■□ 3.98
SSSCA1-205ENST00000527920 DCP1AQ9NPI6 582 aaPredicted RBP39.89■■■■□ 3.98
SSSCA1-205ENST00000527920 BCRP11274 1271 aa39.88■■■■□ 3.97
SSSCA1-205ENST00000527920 MBD4O95243 580 aa39.87■■■■□ 3.97
SSSCA1-205ENST00000527920 POLR3DP05423 398 aaPredicted RBP39.87■■■■□ 3.97
SSSCA1-205ENST00000527920 KBTBD3Q8NAB2 608 aa39.87■■■■□ 3.97
SSSCA1-205ENST00000527920 ARMT1Q9H993 441 aa39.87■■■■□ 3.97
SSSCA1-205ENST00000527920 ATP8A2Q9NTI2 1148 aa39.87■■■■□ 3.97
SSSCA1-205ENST00000527920 MCM9Q9NXL9 1143 aa39.87■■■■□ 3.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms