RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.86■□□□□ 0.61
CAPN1-213ENST00000527897 ERO1AQ96HE7 468 aa18.86■□□□□ 0.61
CAPN1-213ENST00000527897 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
CAPN1-213ENST00000527897 DHX36Q9H2U1 1008 aaKnown RBP18.86■□□□□ 0.61
CAPN1-213ENST00000527897 PI4KBQ9UBF8 816 aa18.86■□□□□ 0.61
CAPN1-213ENST00000527897 PALD1Q9ULE6 856 aa18.86■□□□□ 0.61
CAPN1-213ENST00000527897 KCNH4Q9UQ05 1017 aa18.86■□□□□ 0.61
CAPN1-213ENST00000527897 MYH1P12882 1939 aa18.85■□□□□ 0.61
CAPN1-213ENST00000527897 TRIM75PA6NK02 468 aa18.85■□□□□ 0.61
CAPN1-213ENST00000527897 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
CAPN1-213ENST00000527897 PDE6AP16499 860 aa18.85■□□□□ 0.61
CAPN1-213ENST00000527897 GADL1Q6ZQY3 521 aa18.85■□□□□ 0.61
CAPN1-213ENST00000527897 PAG1Q9NWQ8 432 aa18.85■□□□□ 0.61
CAPN1-213ENST00000527897 HERC5Q9UII4 1024 aaKnown RBP18.85■□□□□ 0.61
CAPN1-213ENST00000527897 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
CAPN1-213ENST00000527897 ATAD5Q96QE3 1844 aa18.85■□□□□ 0.61
CAPN1-213ENST00000527897 MAGEB6P1A0A0J9YX57 407 aa18.84■□□□□ 0.61
CAPN1-213ENST00000527897 PDHXO00330 501 aa18.84■□□□□ 0.61
CAPN1-213ENST00000527897 CXCL11O14625 94 aa18.84■□□□□ 0.61
CAPN1-213ENST00000527897 HLA-DOAP06340 250 aa18.84■□□□□ 0.61
CAPN1-213ENST00000527897 ATP5JP18859 108 aa18.84■□□□□ 0.61
CAPN1-213ENST00000527897 DCTPP1Q9H773 170 aa18.84■□□□□ 0.61
CAPN1-213ENST00000527897 HPS5Q9UPZ3 1129 aa18.84■□□□□ 0.61
CAPN1-213ENST00000527897 SIPA1L1O43166 1804 aa18.84■□□□□ 0.61
CAPN1-213ENST00000527897 ZNF532Q9HCE3 1301 aa18.83■□□□□ 0.61
CAPN1-213ENST00000527897 FBXO46Q6PJ61 603 aaPredicted RBP18.83■□□□□ 0.6
CAPN1-213ENST00000527897 OTOP1Q7RTM1 612 aa18.83■□□□□ 0.6
CAPN1-213ENST00000527897 ANKRD23Q86SG2 305 aa18.83■□□□□ 0.6
CAPN1-213ENST00000527897 CERS3Q8IU89 383 aa18.83■□□□□ 0.6
CAPN1-213ENST00000527897 EFCC1Q9HA90 598 aa18.83■□□□□ 0.6
CAPN1-213ENST00000527897 ZCCHC17Q9NP64 241 aaKnown RBP18.83■□□□□ 0.6
CAPN1-213ENST00000527897 AFG3L2Q9Y4W6 797 aa18.83■□□□□ 0.6
CAPN1-213ENST00000527897 PHIPQ8WWQ0 1821 aa18.82■□□□□ 0.6
CAPN1-213ENST00000527897 TLR2O60603 784 aa18.82■□□□□ 0.6
CAPN1-213ENST00000527897 RRP1BQ14684 758 aaKnown RBP18.82■□□□□ 0.6
CAPN1-213ENST00000527897 HAUS7Q99871 368 aa18.82■□□□□ 0.6
CAPN1-213ENST00000527897 CPA4Q9UI42 421 aa18.82■□□□□ 0.6
CAPN1-213ENST00000527897 A0A0G2JLL6 359 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-213ENST00000527897 CAP2P40123 477 aa18.81■□□□□ 0.6
CAPN1-213ENST00000527897 SOX10P56693 466 aa18.81■□□□□ 0.6
CAPN1-213ENST00000527897 MOGSQ13724 837 aa18.81■□□□□ 0.6
CAPN1-213ENST00000527897 SLFNL1Q499Z3 407 aa18.81■□□□□ 0.6
CAPN1-213ENST00000527897 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
CAPN1-213ENST00000527897 TMED8Q6PL24 325 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-213ENST00000527897 FASTKD5Q7L8L6 764 aaKnown RBP18.81■□□□□ 0.6
CAPN1-213ENST00000527897 PRRT2Q7Z6L0 340 aaPredicted RBP18.81■□□□□ 0.6
CAPN1-213ENST00000527897 GPATCH3Q96I76 525 aa18.81■□□□□ 0.6
CAPN1-213ENST00000527897 PTPRFP10586 1907 aa18.8■□□□□ 0.6
CAPN1-213ENST00000527897 GDF11O95390 407 aa18.8■□□□□ 0.6
CAPN1-213ENST00000527897 SPP2Q13103 211 aa18.8■□□□□ 0.6
CAPN1-213ENST00000527897 KIF22Q14807 665 aa18.8■□□□□ 0.6
CAPN1-213ENST00000527897 GPAT2Q6NUI2 795 aa18.8■□□□□ 0.6
CAPN1-213ENST00000527897 FOXP4Q8IVH2 680 aaPredicted RBP18.8■□□□□ 0.6
CAPN1-213ENST00000527897 RIOK1Q9BRS2 568 aaKnown RBP18.8■□□□□ 0.6
CAPN1-213ENST00000527897 CRNKL1Q9BZJ0 848 aaKnown RBP18.8■□□□□ 0.6
CAPN1-213ENST00000527897 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.8■□□□□ 0.61e-6■■□□□ 11.9
CAPN1-213ENST00000527897 ECHDC1Q9NTX5 307 aa18.8■□□□□ 0.6
CAPN1-213ENST00000527897 NAV1Q8NEY1 1877 aa18.8■□□□□ 0.6
CAPN1-213ENST00000527897 MYH7P12883 1935 aa18.79■□□□□ 0.6
CAPN1-213ENST00000527897 USP17L5A8MUK1 530 aa18.79■□□□□ 0.6
CAPN1-213ENST00000527897 POLR3DP05423 398 aaPredicted RBP18.79■□□□□ 0.6
CAPN1-213ENST00000527897 CYP2C8P10632 490 aa18.79■□□□□ 0.6
CAPN1-213ENST00000527897 CAP1Q01518 475 aa18.79■□□□□ 0.6
CAPN1-213ENST00000527897 PARK7Q99497 189 aaKnown RBP18.79■□□□□ 0.6
CAPN1-213ENST00000527897 DNAJC18Q9H819 358 aa18.79■□□□□ 0.6
CAPN1-213ENST00000527897 ZSWIM8A7E2V4 1837 aa18.79■□□□□ 0.6
CAPN1-213ENST00000527897 HTTP42858 3142 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 TCRBV5S4A2TA0A5A2 114 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 ADD2P35612 726 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 ARHGEF6Q15052 776 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 SHROOM1Q2M3G4 852 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-213ENST00000527897 LCORLQ8N3X6 602 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 ZNF280CQ8ND82 737 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 SDR42E1Q8WUS8 393 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 ARHGAP39Q9C0H5 1083 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 ARMT1Q9H993 441 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 AS3MTQ9HBK9 375 aa18.78■□□□□ 0.6
CAPN1-213ENST00000527897 ZBTB47Q9UFB7 747 aaPredicted RBP18.78■□□□□ 0.6
CAPN1-213ENST00000527897 CENPFP49454 3210 aa18.77■□□□□ 0.6
CAPN1-213ENST00000527897 MBD4O95243 580 aa18.77■□□□□ 0.6
CAPN1-213ENST00000527897 CHGBP05060 677 aa18.77■□□□□ 0.6
CAPN1-213ENST00000527897 ASNSP08243 561 aa18.77■□□□□ 0.6
CAPN1-213ENST00000527897 HMGCS2P54868 508 aa18.77■□□□□ 0.6
CAPN1-213ENST00000527897 TTC6Q86TZ1 520 aa18.77■□□□□ 0.6
CAPN1-213ENST00000527897 SERPINB13Q9UIV8 391 aa18.77■□□□□ 0.6
CAPN1-213ENST00000527897 PTPN22Q9Y2R2 807 aa18.77■□□□□ 0.6
CAPN1-213ENST00000527897 JAG1P78504 1218 aa18.76■□□□□ 0.59
CAPN1-213ENST00000527897 LACTBP83111 547 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-213ENST00000527897 C17orf99Q6UX52 265 aa18.76■□□□□ 0.59
CAPN1-213ENST00000527897 METTL16Q86W50 562 aaKnown RBP18.76■□□□□ 0.59
CAPN1-213ENST00000527897 SMCR8Q8TEV9 937 aaPredicted RBP18.76■□□□□ 0.59
CAPN1-213ENST00000527897 MCM9Q9NXL9 1143 aa18.76■□□□□ 0.59
CAPN1-213ENST00000527897 PLCD1P51178 756 aa18.75■□□□□ 0.59
CAPN1-213ENST00000527897 MTMR2Q13614 643 aa18.75■□□□□ 0.59
CAPN1-213ENST00000527897 TREML2Q5T2D2 321 aa18.75■□□□□ 0.59
CAPN1-213ENST00000527897 ZSCAN25Q6NSZ9 544 aa18.75■□□□□ 0.59
CAPN1-213ENST00000527897 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
CAPN1-213ENST00000527897 ZBTB21Q9ULJ3 1066 aa18.75■□□□□ 0.59
CAPN1-213ENST00000527897 AGTPBP1Q9UPW5 1226 aa18.75■□□□□ 0.59
CAPN1-213ENST00000527897 PRKAB2O43741 272 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms