RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 PLCG2P16885 1265 aa27.42■■□□□ 1.98
TRAPPC4-208ENST00000527680 SPP2Q13103 211 aa27.42■■□□□ 1.98
TRAPPC4-208ENST00000527680 MTFR1Q15390 333 aa27.42■■□□□ 1.98
TRAPPC4-208ENST00000527680 DOCK1Q14185 1865 aa27.42■■□□□ 1.98
TRAPPC4-208ENST00000527680 PRKCZQ05513 592 aa27.41■■□□□ 1.98
TRAPPC4-208ENST00000527680 CCDC8Q9H0W5 538 aaPredicted RBP27.41■■□□□ 1.98
TRAPPC4-208ENST00000527680 PI4KBQ9UBF8 816 aa27.41■■□□□ 1.98
TRAPPC4-208ENST00000527680 AGTPBP1Q9UPW5 1226 aa27.41■■□□□ 1.98
TRAPPC4-208ENST00000527680 CYP2E1P05181 493 aaPredicted RBP27.4■■□□□ 1.98
TRAPPC4-208ENST00000527680 RLBP1P12271 317 aa27.4■■□□□ 1.98
TRAPPC4-208ENST00000527680 CAP2P40123 477 aa27.4■■□□□ 1.98
TRAPPC4-208ENST00000527680 ZNF280CQ8ND82 737 aa27.4■■□□□ 1.98
TRAPPC4-208ENST00000527680 TGFBRAP1Q8WUH2 860 aa27.4■■□□□ 1.98
TRAPPC4-208ENST00000527680 DHX36Q9H2U1 1008 aaKnown RBP27.4■■□□□ 1.98
TRAPPC4-208ENST00000527680 HERC5Q9UII4 1024 aaKnown RBP27.4■■□□□ 1.98
TRAPPC4-208ENST00000527680 MKI67P46013 3256 aaKnown RBP27.4■■□□□ 1.98
TRAPPC4-208ENST00000527680 ZAP70P43403 619 aa27.39■■□□□ 1.98
TRAPPC4-208ENST00000527680 UBXN2AP68543 259 aa27.39■■□□□ 1.98
TRAPPC4-208ENST00000527680 TRIM34Q9BYJ4 488 aa27.39■■□□□ 1.98
TRAPPC4-208ENST00000527680 PNMA3Q9UL41 463 aa27.39■■□□□ 1.98
TRAPPC4-208ENST00000527680 GABRQQ9UN88 632 aa27.39■■□□□ 1.98
TRAPPC4-208ENST00000527680 NOP58Q9Y2X3 529 aaKnown RBP27.39■■□□□ 1.98
TRAPPC4-208ENST00000527680 USP17L5A8MUK1 530 aa27.38■■□□□ 1.97
TRAPPC4-208ENST00000527680 TREML2Q5T2D2 321 aa27.38■■□□□ 1.97
TRAPPC4-208ENST00000527680 MAPKAPK5Q8IW41 473 aa27.38■■□□□ 1.97
TRAPPC4-208ENST00000527680 ANKRD13CQ8N6S4 541 aa27.38■■□□□ 1.97
TRAPPC4-208ENST00000527680 RNF208Q9H0X6 261 aa27.38■■□□□ 1.97
TRAPPC4-208ENST00000527680 TNPO2O14787 897 aaKnown RBP27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 PPP4CP60510 307 aa27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 CRACR2BQ8N4Y2 399 aaPredicted RBP27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 PROCA1Q8NCQ7 364 aaPredicted RBP27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 NKX2-3Q8TAU0 364 aa27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 ZNF512BQ96KM6 892 aaPredicted RBP27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 TBC1D2Q9BYX2 928 aa27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 AS3MTQ9HBK9 375 aa27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 DBNLQ9UJU6 430 aaKnown RBP27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 PHIPQ8WWQ0 1821 aa27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 BRCA2P51587 3418 aa27.37■■□□□ 1.97
TRAPPC4-208ENST00000527680 MGAMO43451 1857 aa27.36■■□□□ 1.97
TRAPPC4-208ENST00000527680 PTPRFP10586 1907 aa27.36■■□□□ 1.97
TRAPPC4-208ENST00000527680 CCL5P13501 91 aa27.36■■□□□ 1.97
TRAPPC4-208ENST00000527680 HMGCS2P54868 508 aa27.36■■□□□ 1.97
TRAPPC4-208ENST00000527680 PABPC4Q13310 644 aaKnown RBP eCLIP27.36■■□□□ 1.97
TRAPPC4-208ENST00000527680 SLAIN1Q8ND83 568 aa27.36■■□□□ 1.97
TRAPPC4-208ENST00000527680 TAOK2Q9UL54 1235 aa27.36■■□□□ 1.97
TRAPPC4-208ENST00000527680 COL2A1P02458 1487 aaPredicted RBP27.36■■□□□ 1.97
TRAPPC4-208ENST00000527680 ADCY3O60266 1144 aa27.35■■□□□ 1.97
TRAPPC4-208ENST00000527680 CYP7A1P22680 504 aa27.35■■□□□ 1.97
TRAPPC4-208ENST00000527680 FLT3LGP49771 235 aa27.35■■□□□ 1.97
TRAPPC4-208ENST00000527680 RRP1BQ14684 758 aaKnown RBP27.35■■□□□ 1.97
TRAPPC4-208ENST00000527680 ADGRA1Q86SQ6 560 aa27.35■■□□□ 1.97
TRAPPC4-208ENST00000527680 FOXP4Q8IVH2 680 aaPredicted RBP27.35■■□□□ 1.97
TRAPPC4-208ENST00000527680 EAF2Q96CJ1 260 aaPredicted RBP27.35■■□□□ 1.97
TRAPPC4-208ENST00000527680 PIH1D3Q9NQM4 214 aaKnown RBP27.35■■□□□ 1.97
TRAPPC4-208ENST00000527680 IDH1O75874 414 aaKnown RBP27.34■■□□□ 1.97
TRAPPC4-208ENST00000527680 COA7Q96BR5 231 aa27.34■■□□□ 1.97
TRAPPC4-208ENST00000527680 TLR7Q9NYK1 1049 aaKnown RBP27.34■■□□□ 1.97
TRAPPC4-208ENST00000527680 PALD1Q9ULE6 856 aa27.34■■□□□ 1.97
TRAPPC4-208ENST00000527680 PANK1Q8TE04 598 aa27.33■■□□□ 1.97
TRAPPC4-208ENST00000527680 SAP30BPQ9UHR5 308 aaKnown RBP27.33■■□□□ 1.97
TRAPPC4-208ENST00000527680 IGSF3O75054 1194 aa27.32■■□□□ 1.96
TRAPPC4-208ENST00000527680 GJB1P08034 283 aa27.32■■□□□ 1.96
TRAPPC4-208ENST00000527680 HABP4Q5JVS0 413 aaKnown RBP27.32■■□□□ 1.96
TRAPPC4-208ENST00000527680 CEP85Q6P2H3 762 aa27.32■■□□□ 1.96
TRAPPC4-208ENST00000527680 EXOC6BQ9Y2D4 811 aa27.32■■□□□ 1.96
TRAPPC4-208ENST00000527680 FLT1P17948 1338 aa27.32■■□□□ 1.96
TRAPPC4-208ENST00000527680 HLA-DOAP06340 250 aa27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 ASNSP08243 561 aa27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 ELNP15502 786 aa27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 GCLCP48506 637 aaPredicted RBP27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 DYNLL1P63167 89 aaKnown RBP27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 ERC1Q8IUD2 1116 aa27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 DPF3Q92784 378 aa27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 TMOD4Q9NZQ9 345 aa27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 PCDH10Q9P2E7 1040 aa27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 MYO5AQ9Y4I1 1855 aaKnown RBP27.31■■□□□ 1.96
TRAPPC4-208ENST00000527680 ATAD5Q96QE3 1844 aa27.3■■□□□ 1.96
TRAPPC4-208ENST00000527680 GJA8P48165 433 aa27.3■■□□□ 1.96
TRAPPC4-208ENST00000527680 FAM110CQ1W6H9 321 aa27.3■■□□□ 1.96
TRAPPC4-208ENST00000527680 AACSQ86V21 672 aa27.3■■□□□ 1.96
TRAPPC4-208ENST00000527680 USP5P45974 858 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 MTMR2Q13614 643 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 MAGEB6Q8N7X4 407 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 MIGA1Q8NAN2 632 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 PXYLP1Q8TE99 480 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 SHISA4Q96DD7 197 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 WDR18Q9BV38 432 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 UNC93B1Q9H1C4 597 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 ASCC2Q9H1I8 757 aaPredicted RBP27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 NDUFB9Q9Y6M9 179 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 ZBED9Q6R2W3 1325 aa27.29■■□□□ 1.96
TRAPPC4-208ENST00000527680 GDF11O95390 407 aa27.28■■□□□ 1.96
TRAPPC4-208ENST00000527680 MS4A1P11836 297 aa27.28■■□□□ 1.96
TRAPPC4-208ENST00000527680 BACE1P56817 501 aa27.28■■□□□ 1.96
TRAPPC4-208ENST00000527680 SH3D19Q5HYK7 790 aa27.28■■□□□ 1.96
TRAPPC4-208ENST00000527680 BCL11AQ9H165 835 aa27.28■■□□□ 1.96
TRAPPC4-208ENST00000527680 DOCK3Q8IZD9 2030 aa27.28■■□□□ 1.96
TRAPPC4-208ENST00000527680 INHAP05111 366 aa27.27■■□□□ 1.96
TRAPPC4-208ENST00000527680 IRX3P78415 501 aaPredicted RBP27.27■■□□□ 1.96
TRAPPC4-208ENST00000527680 MAP3K12Q12852 859 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms