RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 TTF1Q15361 905 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-216ENST00000527467 KLHL40Q2TBA0 621 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 HS1BP3Q53T59 392 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 POTEBQ6S5H4 581 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 ATF7IPQ6VMQ6 1270 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 DEFB132Q7Z7B7 95 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 ZSCAN29Q8IWY8 852 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-216ENST00000527467 RTKN2Q8IZC4 609 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 SDCCAG3Q96C92 435 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 HAUS1Q96CS2 278 aa8.09□□□□□ -1.11
CTNND1-216ENST00000527467 SOS2Q07890 1332 aaPredicted RBP8.09□□□□□ -1.11
CTNND1-216ENST00000527467 ACTN4O43707 911 aaKnown RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 RNF40O75150 1001 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 UBE2HP62256 183 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 PPFIA1Q13136 1202 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 LRSAM1Q6UWE0 723 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 TMC4Q7Z404 712 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 FNBP4Q8N3X1 1017 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 TNPO1Q92973 898 aaKnown RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 CCDC42Q96M95 316 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 UTP14AQ9BVJ6 771 aaKnown RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 SYNMO15061 1565 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 CREB3O43889 395 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 RAB11FIP3O75154 756 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 KRT3P12035 628 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 UBA7P41226 1012 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 CDR2Q01850 454 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 FKBP4Q02790 459 aaKnown RBP eCLIP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 EZH2Q15910 746 aaKnown RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 C2orf69Q8N8R5 385 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 PPME1Q9Y570 386 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 MBD5Q9P267 1494 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 WBP4O75554 376 aaKnown RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 SYT1P21579 422 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 SSFA2P28290 1259 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 EVCP57679 992 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 ZBTB41Q5SVQ8 909 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 PIK3R5Q8WYR1 880 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 MPHOSPH6Q99547 160 aaKnown RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 C1orf115Q9H7X2 142 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 EXOC1Q9NV70 894 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 STK38LQ9Y2H1 464 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 TUBB2AQ13885 445 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 ZNF830Q96NB3 372 aaPredicted RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 UIMC1Q96RL1 719 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 HAUS7Q99871 368 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 TUBB2BQ9BVA1 445 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 SPATA31A5Q5VU36 1347 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 SPATA31A7Q8IWB4 1347 aa8.08□□□□□ -1.12
CTNND1-216ENST00000527467 DNMT1P26358 1616 aaKnown RBP8.08□□□□□ -1.12
CTNND1-216ENST00000527467 ERVV-2B6SEH9 535 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 HCLS1P14317 486 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 PTGS1P23219 599 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 NUCB1Q02818 461 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 ZNF569Q5MCW4 686 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 AACSQ86V21 672 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 NME9Q86XW9 330 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 TTLL6Q8N841 843 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 FAM200AQ8TCP9 573 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 NEK1Q96PY6 1258 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 TSGA10Q9BZW7 698 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 ZC3H12CQ9C0D7 883 aaKnown RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 CCDC68Q9H2F9 335 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 YY1AP1Q9H869 796 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 BAG5Q9UL15 447 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 LRRC7Q96NW7 1537 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 TBCAO75347 108 aaKnown RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 BAG2O95816 211 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 APLP1P51693 650 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 SEL1L2Q5TEA6 688 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 SRGAP1Q7Z6B7 1085 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 MSANTD4Q8NCY6 345 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 WDR70Q9NW82 654 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 SCHIP1Q9P0W5 487 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 ARHGAP42A6NI28 874 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 HGSO14964 777 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 ITIH3Q06033 890 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 PARP10Q53GL7 1025 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 NLRP7Q8WX94 980 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 GUCA1BQ9UMX6 200 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 COPG1Q9Y678 874 aaKnown RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 TMEM110-MUSTN1A8MSY1 372 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 SNRPA1P09661 255 aaKnown RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 SSRP1Q08945 709 aaKnown RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 SNCBQ16143 134 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 GJC2Q5T442 439 aaPredicted RBP8.07□□□□□ -1.12
CTNND1-216ENST00000527467 LGSNQ5TDP6 509 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 SPDL1Q96EA4 605 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 FAM204AQ9H8W3 233 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 CRB1P82279 1406 aa8.07□□□□□ -1.12
CTNND1-216ENST00000527467 LMNAP02545 664 aaKnown RBP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 TROVE2P10155 538 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTNND1-216ENST00000527467 NEK2P51955 445 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 LMNB2Q03252 620 aa8.06□□□□□ -1.12
CTNND1-216ENST00000527467 ZSCAN26Q16670 478 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms