RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 VSTM4Q8IW00 320 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 APPBP2Q92624 585 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 PDGFDQ9GZP0 370 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-208ENST00000527323 HSD3B7Q9H2F3 369 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 TUBE1Q9UJT0 475 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 AFDNP55196 1824 aaKnown RBP14.34□□□□□ -0.11
CAPN1-208ENST00000527323 DEFB132Q7Z7B7 95 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 REXO1L1PQ8IX06 675 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 SMARCC1Q92922 1105 aaPredicted RBP14.34□□□□□ -0.11
CAPN1-208ENST00000527323 JAG2Q9Y219 1238 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 AKAP2Q9Y2D5 859 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 PCDHA5Q9Y5H7 936 aa14.34□□□□□ -0.11
CAPN1-208ENST00000527323 ZPR1O75312 459 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 CDKL5O76039 1030 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 TPM1P09493 284 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 RFC4P35249 363 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 SCARF1Q14162 830 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 LONRF3Q496Y0 759 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 STK11IPQ8N1F8 1099 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 DENND2AQ9ULE3 1009 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 PPP2R2CQ9Y2T4 447 aa14.33□□□□□ -0.11
CAPN1-208ENST00000527323 RTCBQ9Y3I0 505 aaKnown RBP14.33□□□□□ -0.11
CAPN1-208ENST00000527323 FOXP2O15409 715 aa14.33□□□□□ -0.12
CAPN1-208ENST00000527323 LDHAL6AQ6ZMR3 332 aa14.33□□□□□ -0.12
CAPN1-208ENST00000527323 ZBTB38Q8NAP3 1195 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-208ENST00000527323 BAG1Q99933 345 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-208ENST00000527323 CNNM1Q9NRU3 951 aa14.33□□□□□ -0.12
CAPN1-208ENST00000527323 KCNH3Q9ULD8 1083 aa14.33□□□□□ -0.12
CAPN1-208ENST00000527323 EFCAB8A8MWE9 144 aa14.33□□□□□ -0.12
CAPN1-208ENST00000527323 ARHGAP6O43182 974 aa14.33□□□□□ -0.12
CAPN1-208ENST00000527323 EN1Q05925 392 aaPredicted RBP14.33□□□□□ -0.12
CAPN1-208ENST00000527323 TTLL11Q8NHH1 800 aa14.33□□□□□ -0.12
CAPN1-208ENST00000527323 TRERF1Q96PN7 1200 aa14.33□□□□□ -0.12
CAPN1-208ENST00000527323 ANGEL1Q9UNK9 670 aaKnown RBP14.33□□□□□ -0.12
CAPN1-208ENST00000527323 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
CAPN1-208ENST00000527323 PPP6R2O75170 966 aa14.32□□□□□ -0.12
CAPN1-208ENST00000527323 TADA3O75528 432 aa14.32□□□□□ -0.12
CAPN1-208ENST00000527323 CIAO1O76071 339 aa14.32□□□□□ -0.12
CAPN1-208ENST00000527323 IARSP41252 1262 aaKnown RBP14.32□□□□□ -0.12
CAPN1-208ENST00000527323 IFIT5Q13325 482 aaKnown RBP14.32□□□□□ -0.12
CAPN1-208ENST00000527323 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.32□□□□□ -0.12
CAPN1-208ENST00000527323 ADKP55263 362 aaKnown RBP14.32□□□□□ -0.12
CAPN1-208ENST00000527323 TFCP2L1Q9NZI6 479 aa14.32□□□□□ -0.12
CAPN1-208ENST00000527323 PARP3Q9Y6F1 533 aa14.32□□□□□ -0.12
CAPN1-208ENST00000527323 KRBA2Q6ZNG9 492 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 METTL16Q86W50 562 aaKnown RBP14.31□□□□□ -0.12
CAPN1-208ENST00000527323 FOXP4Q8IVH2 680 aaPredicted RBP14.31□□□□□ -0.12
CAPN1-208ENST00000527323 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.31□□□□□ -0.12
CAPN1-208ENST00000527323 MYL10Q9BUA6 226 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.31□□□□□ -0.127e-7■■■■□ 19.7
CAPN1-208ENST00000527323 HOOK1Q9UJC3 728 aaKnown RBP14.31□□□□□ -0.12
CAPN1-208ENST00000527323 HPSEQ9Y251 543 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 ZMYM6O95789 1325 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 UBR2Q8IWV8 1755 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 VWA3AA6NCI4 1184 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 FOXN1O15353 648 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 CUTAO60888 179 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 FAM193AP78312 1265 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 TXNRD1Q16881 649 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 CREBRFQ8IUR6 639 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 MPHOSPH8Q99549 860 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 ATRNO75882 1429 aa14.31□□□□□ -0.12
CAPN1-208ENST00000527323 B4E1Z4 1266 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 ZBTB43O43298 467 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 ZRANB2O95218 330 aaKnown RBP eCLIP14.3□□□□□ -0.124e-7■■■■■ 32.1
CAPN1-208ENST00000527323 ATP2B1P20020 1258 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 CYP2C19P33261 490 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 PDE4BQ07343 736 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 PTPAQ15257 358 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 SLC9C2Q5TAH2 1124 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 RESP18Q5W5W9 173 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 WDR24Q96S15 920 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 NWD2Q9ULI1 1742 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 LAMA4Q16363 1823 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 IDH1O75874 414 aaKnown RBP14.3□□□□□ -0.12
CAPN1-208ENST00000527323 CDC27P30260 824 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 CYB5R4Q7L1T6 521 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 FCHSD1Q86WN1 690 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 CCDC34Q96HJ3 373 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 SLC26A6Q9BXS9 759 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 ZCCHC17Q9NP64 241 aaKnown RBP14.3□□□□□ -0.12
CAPN1-208ENST00000527323 TAF1P21675 1872 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 GOLGA8AA7E2F4 631 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 FANCGO15287 622 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 PPP2R3AQ06190 1150 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 KARSQ15046 597 aaKnown RBP14.3□□□□□ -0.12
CAPN1-208ENST00000527323 METTL24Q5JXM2 366 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 NBPF5PQ86XG9 351 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-208ENST00000527323 ZNF34Q8IZ26 560 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 GPR101Q96P66 508 aaPredicted RBP14.3□□□□□ -0.12
CAPN1-208ENST00000527323 ZSWIM4Q9H7M6 989 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 SENP2Q9HC62 589 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 NFE2L3Q9Y4A8 694 aa14.3□□□□□ -0.12
CAPN1-208ENST00000527323 PCCAP05165 728 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-208ENST00000527323 TRAPPC3LQ5T215 181 aa14.29□□□□□ -0.12
CAPN1-208ENST00000527323 APOA5Q6Q788 366 aa14.29□□□□□ -0.12
CAPN1-208ENST00000527323 PAXIP1Q6ZW49 1069 aaPredicted RBP14.29□□□□□ -0.12
CAPN1-208ENST00000527323 TRMT44Q8IYL2 757 aaKnown RBP14.29□□□□□ -0.12
CAPN1-208ENST00000527323 KRI1Q8N9T8 703 aaKnown RBP14.29□□□□□ -0.12
CAPN1-208ENST00000527323 ZNF219Q9P2Y4 722 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms