RNA–Protein interactions for RNA: ENST00000527237.1

TRIM3-205, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 339 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-205ENST00000527237 CFHR5Q9BXR6 569 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 DNAJC18Q9H819 358 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.01■■□□□ 1.11
TRIM3-205ENST00000527237 ECHDC1Q9NTX5 307 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 PALD1Q9ULE6 856 aa22.01■■□□□ 1.11
TRIM3-205ENST00000527237 GPR25O00155 361 aa22■■□□□ 1.11
TRIM3-205ENST00000527237 PPATQ06203 517 aa22■■□□□ 1.11
TRIM3-205ENST00000527237 CRHR2Q13324 411 aa22■■□□□ 1.11
TRIM3-205ENST00000527237 TBC1D12O60347 775 aa21.99■■□□□ 1.11
TRIM3-205ENST00000527237 ALDH1A1P00352 501 aa21.99■■□□□ 1.11
TRIM3-205ENST00000527237 ADD2P35612 726 aa21.99■■□□□ 1.11
TRIM3-205ENST00000527237 LCORLQ8N3X6 602 aa21.99■■□□□ 1.11
TRIM3-205ENST00000527237 MAGEB6P1A0A0J9YX57 407 aa21.98■■□□□ 1.11
TRIM3-205ENST00000527237 USP5P45974 858 aa21.98■■□□□ 1.11
TRIM3-205ENST00000527237 SNAPC2Q13487 334 aa21.98■■□□□ 1.11
TRIM3-205ENST00000527237 DGKZQ13574 1117 aa21.98■■□□□ 1.11
TRIM3-205ENST00000527237 SHROOM1Q2M3G4 852 aaPredicted RBP21.98■■□□□ 1.11
TRIM3-205ENST00000527237 MCOLN1Q9GZU1 580 aa21.98■■□□□ 1.11
TRIM3-205ENST00000527237 BTBD19C9JJ37 291 aa21.97■■□□□ 1.11
TRIM3-205ENST00000527237 PTPRAP18433 802 aa21.97■■□□□ 1.11
TRIM3-205ENST00000527237 EVX2Q03828 476 aa21.97■■□□□ 1.11
TRIM3-205ENST00000527237 HDAC1Q13547 482 aaPredicted RBP21.97■■□□□ 1.11
TRIM3-205ENST00000527237 MOGSQ13724 837 aa21.97■■□□□ 1.11
TRIM3-205ENST00000527237 KCNH4Q9UQ05 1017 aa21.97■■□□□ 1.11
TRIM3-205ENST00000527237 SALL3Q9BXA9 1300 aa21.97■■□□□ 1.11
TRIM3-205ENST00000527237 CTNND1O60716 968 aaKnown RBP21.96■■□□□ 1.11
TRIM3-205ENST00000527237 CETPP11597 493 aa21.96■■□□□ 1.11
TRIM3-205ENST00000527237 IRX6P78412 446 aaPredicted RBP21.96■■□□□ 1.11
TRIM3-205ENST00000527237 DHX36Q9H2U1 1008 aaKnown RBP21.96■■□□□ 1.11
TRIM3-205ENST00000527237 ARMT1Q9H993 441 aa21.96■■□□□ 1.11
TRIM3-205ENST00000527237 PICK1Q9NRD5 415 aa21.96■■□□□ 1.11
TRIM3-205ENST00000527237 PI4KBQ9UBF8 816 aa21.96■■□□□ 1.11
TRIM3-205ENST00000527237 ZHX2Q9Y6X8 837 aa21.96■■□□□ 1.11
TRIM3-205ENST00000527237 JAG1P78504 1218 aa21.95■■□□□ 1.1
TRIM3-205ENST00000527237 TAF1CQ15572 869 aaPredicted RBP21.95■■□□□ 1.1
TRIM3-205ENST00000527237 TMED8Q6PL24 325 aaPredicted RBP21.95■■□□□ 1.1
TRIM3-205ENST00000527237 CERS3Q8IU89 383 aa21.95■■□□□ 1.1
TRIM3-205ENST00000527237 PI4K2BQ8TCG2 481 aa21.95■■□□□ 1.1
TRIM3-205ENST00000527237 SDR42E1Q8WUS8 393 aa21.95■■□□□ 1.1
TRIM3-205ENST00000527237 ABHD8Q96I13 439 aa21.95■■□□□ 1.1
TRIM3-205ENST00000527237 GPATCH3Q96I76 525 aa21.95■■□□□ 1.1
TRIM3-205ENST00000527237 HERC5Q9UII4 1024 aaKnown RBP21.95■■□□□ 1.1
TRIM3-205ENST00000527237 MBD4O95243 580 aa21.94■■□□□ 1.1
TRIM3-205ENST00000527237 NOM1Q5C9Z4 860 aaKnown RBP21.94■■□□□ 1.1
TRIM3-205ENST00000527237 ANKRD45Q5TZF3 282 aa21.94■■□□□ 1.1
TRIM3-205ENST00000527237 OTUD7BQ6GQQ9 843 aa21.94■■□□□ 1.1
TRIM3-205ENST00000527237 PRKAB2O43741 272 aa21.93■■□□□ 1.1
TRIM3-205ENST00000527237 FKTNO75072 461 aa21.93■■□□□ 1.1
TRIM3-205ENST00000527237 CAP2P40123 477 aa21.93■■□□□ 1.1
TRIM3-205ENST00000527237 CAP1Q01518 475 aa21.93■■□□□ 1.1
TRIM3-205ENST00000527237 TTC41PQ6P2S7 1318 aa21.93■■□□□ 1.1
TRIM3-205ENST00000527237 METTL16Q86W50 562 aaKnown RBP21.93■■□□□ 1.1
TRIM3-205ENST00000527237 CRACR2BQ8N4Y2 399 aaPredicted RBP21.93■■□□□ 1.1
TRIM3-205ENST00000527237 CRNKL1Q9BZJ0 848 aaKnown RBP21.93■■□□□ 1.1
TRIM3-205ENST00000527237 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.93■■□□□ 1.1
TRIM3-205ENST00000527237 AFG3L2Q9Y4W6 797 aa21.93■■□□□ 1.1
TRIM3-205ENST00000527237 GDF11O95390 407 aa21.92■■□□□ 1.1
TRIM3-205ENST00000527237 IGHDP01880 384 aa21.92■■□□□ 1.1
TRIM3-205ENST00000527237 HLA-DOAP06340 250 aa21.92■■□□□ 1.1
TRIM3-205ENST00000527237 MX1P20591 662 aa21.92■■□□□ 1.1
TRIM3-205ENST00000527237 CTU1Q7Z7A3 348 aaKnown RBP21.92■■□□□ 1.1
TRIM3-205ENST00000527237 KBTBD3Q8NAB2 608 aa21.92■■□□□ 1.1
TRIM3-205ENST00000527237 HTTP42858 3142 aa21.92■■□□□ 1.1
TRIM3-205ENST00000527237 GREB1LQ9C091 1923 aaPredicted RBP21.91■■□□□ 1.1
TRIM3-205ENST00000527237 A0A0G2JLL6 359 aaPredicted RBP21.91■■□□□ 1.1
TRIM3-205ENST00000527237 TRIM75PA6NK02 468 aa21.91■■□□□ 1.1
TRIM3-205ENST00000527237 PLCD1P51178 756 aa21.91■■□□□ 1.1
TRIM3-205ENST00000527237 UBE3CQ15386 1083 aa21.91■■□□□ 1.1
TRIM3-205ENST00000527237 GPAT2Q6NUI2 795 aa21.91■■□□□ 1.1
TRIM3-205ENST00000527237 PRRT2Q7Z6L0 340 aaPredicted RBP21.91■■□□□ 1.1
TRIM3-205ENST00000527237 GCC1Q96CN9 775 aa21.91■■□□□ 1.1
TRIM3-205ENST00000527237 PUS7LQ9H0K6 701 aaKnown RBP21.91■■□□□ 1.1
TRIM3-205ENST00000527237 PARP14Q460N5 1801 aa21.9■■□□□ 1.1
TRIM3-205ENST00000527237 CYP2D6P10635 497 aa21.9■■□□□ 1.1
TRIM3-205ENST00000527237 AAMPQ13685 434 aa21.9■■□□□ 1.1
TRIM3-205ENST00000527237 ANKRD23Q86SG2 305 aa21.9■■□□□ 1.1
TRIM3-205ENST00000527237 CD99L2Q8TCZ2 262 aa21.9■■□□□ 1.1
TRIM3-205ENST00000527237 TRIM34Q9BYJ4 488 aa21.9■■□□□ 1.1
TRIM3-205ENST00000527237 DCP1AQ9NPI6 582 aaPredicted RBP21.9■■□□□ 1.1
TRIM3-205ENST00000527237 DOCK3Q8IZD9 2030 aa21.89■■□□□ 1.1
TRIM3-205ENST00000527237 ADGRA2Q96PE1 1338 aa21.89■■□□□ 1.1
TRIM3-205ENST00000527237 SMIM22K7EJ46 135 aa21.89■■□□□ 1.09
TRIM3-205ENST00000527237 PDHXO00330 501 aa21.89■■□□□ 1.09
TRIM3-205ENST00000527237 CXCL11O14625 94 aa21.89■■□□□ 1.09
TRIM3-205ENST00000527237 GADL1Q6ZQY3 521 aa21.89■■□□□ 1.09
TRIM3-205ENST00000527237 FOXP4Q8IVH2 680 aaPredicted RBP21.89■■□□□ 1.09
TRIM3-205ENST00000527237 ZFYVE28Q9HCC9 887 aa21.89■■□□□ 1.09
TRIM3-205ENST00000527237 MYH4Q9Y623 1939 aa21.88■■□□□ 1.09
TRIM3-205ENST00000527237 B4GALNT3Q6L9W6 998 aa21.88■■□□□ 1.09
TRIM3-205ENST00000527237 SMC5Q8IY18 1101 aa21.88■■□□□ 1.09
TRIM3-205ENST00000527237 LNPKQ9C0E8 428 aa21.88■■□□□ 1.09
TRIM3-205ENST00000527237 EHD4Q9H223 541 aa21.88■■□□□ 1.09
TRIM3-205ENST00000527237 ZCCHC17Q9NP64 241 aaKnown RBP21.88■■□□□ 1.09
TRIM3-205ENST00000527237 MCM9Q9NXL9 1143 aa21.88■■□□□ 1.09
TRIM3-205ENST00000527237 SERPINB13Q9UIV8 391 aa21.88■■□□□ 1.09
TRIM3-205ENST00000527237 ZBTB21Q9ULJ3 1066 aa21.88■■□□□ 1.09
TRIM3-205ENST00000527237 CYP2D7A0A087X1C5 515 aa21.87■■□□□ 1.09
TRIM3-205ENST00000527237 GLRX3O76003 335 aaKnown RBP21.87■■□□□ 1.09
TRIM3-205ENST00000527237 SPP2Q13103 211 aa21.87■■□□□ 1.09
TRIM3-205ENST00000527237 ZSCAN25Q6NSZ9 544 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms