RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 VPS72Q15906 364 aa13.82□□□□□ -0.2
CHMP1B-201ENST00000526991 PDILTQ8N807 584 aa13.82□□□□□ -0.2
CHMP1B-201ENST00000526991 CCDC112Q8NEF3 446 aa13.82□□□□□ -0.2
CHMP1B-201ENST00000526991 EVCP57679 992 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 MAP3K12Q12852 859 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 PARP10Q53GL7 1025 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 NBPF11Q86T75 865 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 LRRC4BQ9NT99 713 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 RTCBQ9Y3I0 505 aaKnown RBP13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 SLC12A7Q9Y666 1083 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 BTBD18B2RXH4 712 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 RFC4P35249 363 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 GRIN1Q05586 938 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 TRIM29Q14134 588 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 SHC4Q6S5L8 630 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 IFNL3Q8IZI9 196 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 MRFAP1L1Q96HT8 127 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 CGNQ9P2M7 1197 aaKnown RBP13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 MINPP1Q9UNW1 487 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 SPEF2Q9C093 1822 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 ZMYM6O95789 1325 aa13.81□□□□□ -0.2
CHMP1B-201ENST00000526991 TRIM37O94972 964 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 SEPT12Q8IYM1 358 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 CCDC94Q9BW85 323 aaPredicted RBP13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 YEATS4O95619 227 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 CCZ1BP86790 482 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 CCZ1P86791 482 aaPredicted RBP13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 PTPN14Q15678 1187 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 ATL3Q6DD88 541 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 BRAPQ7Z569 592 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 GRAMD1CQ8IYS0 662 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 LY9Q9HBG7 655 aa13.8□□□□□ -0.2
CHMP1B-201ENST00000526991 A0A1W2PQ27 194 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 A0A1W2PQ64 194 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 A0A1W2PQD8 194 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 ZNF827Q17R98 1081 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 CPLX2Q6PUV4 134 aaKnown RBP13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 SARM1Q6SZW1 724 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 DPF2Q92785 391 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 FAM217BQ9NTX9 383 aaPredicted RBP13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 TCRBV5S4A2TA0A5A2 114 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 CAVIN2O95810 425 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 ARID4AP29374 1257 aaPredicted RBP13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 NCBP1Q09161 790 aaKnown RBP13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 NR5A1Q13285 461 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 TTF1Q15361 905 aaPredicted RBP13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 LONRF3Q496Y0 759 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 TMX1Q9H3N1 280 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 FBXO3Q9UK99 471 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 MYH3P11055 1940 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 AKAP11Q9UKA4 1901 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 UQCRFS1P1P0C7P4 283 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 SLC39A14Q15043 492 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 NLRP3Q96P20 1036 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 ANKIB1Q9P2G1 1089 aa13.79□□□□□ -0.2
CHMP1B-201ENST00000526991 PRDX5P30044 214 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 NFIXQ14938 502 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 UBE3CQ15386 1083 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 FAM177A1Q8N128 213 aaPredicted RBP13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 AK7Q96M32 723 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 NWD2Q9ULI1 1742 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 SERPINC1P01008 464 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 CMA1P23946 247 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 ARMCX5Q6P1M9 558 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 MFSD6Q6ZSS7 791 aa13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 MTERF4Q7Z6M4 381 aaKnown RBP13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 AATFQ9NY61 560 aaKnown RBP eCLIP13.78□□□□□ -0.2
CHMP1B-201ENST00000526991 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.77□□□□□ -0.2
CHMP1B-201ENST00000526991 NLRP12P59046 1061 aa13.77□□□□□ -0.2
CHMP1B-201ENST00000526991 RPS8P62241 208 aaKnown RBP13.77□□□□□ -0.2
CHMP1B-201ENST00000526991 SSRP1Q08945 709 aaKnown RBP13.77□□□□□ -0.2
CHMP1B-201ENST00000526991 ZNF215Q9UL58 517 aaPredicted RBP13.77□□□□□ -0.2
CHMP1B-201ENST00000526991 SMTNL1A8MU46 457 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 GSG1L2A8MUP6 293 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 CDC25BP30305 580 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 CFAP100Q494V2 611 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 CNNM3Q8NE01 707 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 FAM84BQ96KN1 310 aaPredicted RBP13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 TMEM232C9JQI7 657 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 FANCCQ00597 558 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 NTRK3Q16288 839 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 FOXP4Q8IVH2 680 aaPredicted RBP13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
CHMP1B-201ENST00000526991 FAM205CA6NFA0 338 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 CDKL5O76039 1030 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 FAM193AP78312 1265 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 NCAPHQ15003 741 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 OLFM4Q6UX06 510 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 USP49Q70CQ1 688 aa13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 DIS3L2Q8IYB7 885 aaKnown RBP13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 CCAR2Q8N163 923 aaKnown RBP13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 QTRT2Q9H974 415 aaKnown RBP13.76□□□□□ -0.21
CHMP1B-201ENST00000526991 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms