RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 SIAH1Q8IUQ4 282 aa5.91□□□□□ -1.46
ECHDC1-219ENST00000526299 CARS2Q9HA77 564 aaKnown RBP5.91□□□□□ -1.46
ECHDC1-219ENST00000526299 C19orf73Q9NVV2 129 aa5.91□□□□□ -1.46
ECHDC1-219ENST00000526299 NCANO14594 1321 aa5.91□□□□□ -1.46
ECHDC1-219ENST00000526299 GNAT3A8MTJ3 354 aa5.9□□□□□ -1.46
ECHDC1-219ENST00000526299 PPP1R15AO75807 674 aaPredicted RBP5.9□□□□□ -1.46
ECHDC1-219ENST00000526299 EOMESO95936 686 aa5.9□□□□□ -1.46
ECHDC1-219ENST00000526299 CLCN7P51798 805 aa5.9□□□□□ -1.46
ECHDC1-219ENST00000526299 TMEM67Q5HYA8 995 aa5.9□□□□□ -1.46
ECHDC1-219ENST00000526299 PI16Q6UXB8 463 aa5.9□□□□□ -1.46
ECHDC1-219ENST00000526299 DIRC2Q96SL1 478 aa5.9□□□□□ -1.46
ECHDC1-219ENST00000526299 DCDC2CA8MYV0 355 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 B8ZZF3 427 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 ZNF252P-AS1Q0IIN9 211 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 TTLL10Q6ZVT0 673 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 CCDC82Q8N4S0 544 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 TMC1Q8TDI8 760 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 ACSBG1Q96GR2 724 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 CSRNP1Q96S65 589 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 KCNK12Q9HB15 430 aa5.89□□□□□ -1.47
ECHDC1-219ENST00000526299 NPIPB6E9PJ23 425 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 NFIBO00712 420 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 NME2P22392 152 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 BUD31P41223 144 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 C12orf40Q86WS4 652 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 FBXO15Q8NCQ5 510 aaPredicted RBP5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 HSPA12BQ96MM6 686 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 NSUN3Q9H649 340 aaKnown RBP5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 CBX8Q9HC52 389 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 ATP13A1Q9HD20 1204 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 SEMA3GQ9NS98 782 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 AKAP2Q9Y2D5 859 aa5.88□□□□□ -1.47
ECHDC1-219ENST00000526299 PRR33A8MZF0 331 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 GRIN3AQ8TCU5 1115 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 CITED4Q96RK1 184 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 EMILIN2Q9BXX0 1053 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 BCO2Q9BYV7 579 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 FOXQ1Q9C009 403 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 PRDM5Q9NQX1 630 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 PICK1Q9NRD5 415 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 PPP4R2Q9NY27 417 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 CACNA2D2Q9NY47 1150 aa5.87□□□□□ -1.47
ECHDC1-219ENST00000526299 CNTNAP4Q9C0A0 1308 aa5.86□□□□□ -1.47
ECHDC1-219ENST00000526299 GDNFP39905 211 aa5.86□□□□□ -1.47
ECHDC1-219ENST00000526299 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
ECHDC1-219ENST00000526299 FAM155AB1AL88 458 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 H3BS24 57 aa5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 RBAK-RBAKDNI3L0D1 243 aa5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 XRCC5P13010 732 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 RING1Q06587 406 aa5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 ZBTB37Q5TC79 503 aa5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 CDKAL1Q5VV42 579 aa5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 ARMCX6Q7L4S7 300 aa5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 NLRP2Q9NX02 1062 aa5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 MAPK8IP1Q9UQF2 711 aa5.85□□□□□ -1.47
ECHDC1-219ENST00000526299 FANCGO15287 622 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 SLITRK5O94991 958 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 INHBBP09529 407 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 TMEM253P0C7T8 217 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 BMP6P22004 513 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 NXPE4Q6UWF7 544 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 ATG14Q6ZNE5 492 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 CDC37L1Q7L3B6 337 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 AMIGO3Q86WK7 504 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 NPAS4Q8IUM7 802 aa5.84□□□□□ -1.47
ECHDC1-219ENST00000526299 KCNA10Q16322 511 aa5.83□□□□□ -1.48
ECHDC1-219ENST00000526299 NECAB3Q96P71 396 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-219ENST00000526299 CD320Q9NPF0 282 aa5.83□□□□□ -1.48
ECHDC1-219ENST00000526299 RAPGEFL1Q9UHV5 662 aa5.83□□□□□ -1.48
ECHDC1-219ENST00000526299 TPX2Q9ULW0 747 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-219ENST00000526299 PAGE1O75459 146 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 LRIG2O94898 1065 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 TRIM37O94972 964 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 FGD1P98174 961 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 SFRP5Q5T4F7 317 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 TPTE2Q6XPS3 522 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 MFSD4AQ8N468 514 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 ALKBH8Q96BT7 664 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 DMRTB1Q96MA1 342 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 EPB41L4BQ9H329 900 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 DCP1AQ9NPI6 582 aaPredicted RBP5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 PCDHA4Q9UN74 947 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 ST14Q9Y5Y6 855 aa5.82□□□□□ -1.48
ECHDC1-219ENST00000526299 ETV2O00321 342 aaPredicted RBP5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 ENC1O14682 589 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 RASIP1Q5U651 963 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 B4GALNT3Q6L9W6 998 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 KCT2Q8NC54 265 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 C3orf58Q8NDZ4 430 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 RIN3Q8TB24 985 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 ABHD4Q8TB40 342 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 ALPK1Q96QP1 1244 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 MIPEPQ99797 713 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 RBCK1Q9BYM8 510 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 FBRSQ9HAH7 460 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 CAPN6Q9Y6Q1 641 aa5.81□□□□□ -1.48
ECHDC1-219ENST00000526299 TCAF2A6NFQ2 919 aa5.8□□□□□ -1.48
ECHDC1-219ENST00000526299 MED14OSP0DP75 135 aa5.8□□□□□ -1.48
ECHDC1-219ENST00000526299 CTSWP56202 376 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms