RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 FOCADQ5VW36 1801 aa16.33■□□□□ 0.21
USH1C-203ENST00000526181 CDK5RAP2Q96SN8 1893 aa16.33■□□□□ 0.21
USH1C-203ENST00000526181 PDHXO00330 501 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 PDE6AP16499 860 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 ATP5JP18859 108 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 SP3Q02447 781 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 TTF1Q15361 905 aaPredicted RBP16.33■□□□□ 0.2
USH1C-203ENST00000526181 SLFNL1Q499Z3 407 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 SLC9C2Q5TAH2 1124 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 CRBNQ96SW2 442 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 RIOK1Q9BRS2 568 aaKnown RBP16.33■□□□□ 0.2
USH1C-203ENST00000526181 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
USH1C-203ENST00000526181 DCTPP1Q9H773 170 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 AFG3L2Q9Y4W6 797 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 TRIM17Q9Y577 477 aa16.33■□□□□ 0.2
USH1C-203ENST00000526181 TRIM75PA6NK02 468 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 CXCL11O14625 94 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 CHGBP05060 677 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 JAG1P78504 1218 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 PKN2Q16513 984 aaKnown RBP16.32■□□□□ 0.2
USH1C-203ENST00000526181 GPAT2Q6NUI2 795 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 OTOP1Q7RTM1 612 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 ANKRD23Q86SG2 305 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 ERO1AQ96HE7 468 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 ZNF532Q9HCE3 1301 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 PAG1Q9NWQ8 432 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 PI4KBQ9UBF8 816 aa16.32■□□□□ 0.2
USH1C-203ENST00000526181 A0A0G2JLL6 359 aaPredicted RBP16.31■□□□□ 0.2
USH1C-203ENST00000526181 TCRBV5S4A2TA0A5A2 114 aa16.31■□□□□ 0.2
USH1C-203ENST00000526181 TLR2O60603 784 aa16.31■□□□□ 0.2
USH1C-203ENST00000526181 CAP2P40123 477 aa16.31■□□□□ 0.2
USH1C-203ENST00000526181 USP5P45974 858 aa16.31■□□□□ 0.2
USH1C-203ENST00000526181 SHROOM1Q2M3G4 852 aaPredicted RBP16.31■□□□□ 0.2
USH1C-203ENST00000526181 PRRT2Q7Z6L0 340 aaPredicted RBP16.31■□□□□ 0.2
USH1C-203ENST00000526181 HAUS7Q99871 368 aa16.31■□□□□ 0.2
USH1C-203ENST00000526181 ZCCHC17Q9NP64 241 aaKnown RBP16.31■□□□□ 0.2
USH1C-203ENST00000526181 HERC5Q9UII4 1024 aaKnown RBP16.31■□□□□ 0.2
USH1C-203ENST00000526181 MAGEB6P1A0A0J9YX57 407 aa16.3■□□□□ 0.2
USH1C-203ENST00000526181 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
USH1C-203ENST00000526181 FBXO46Q6PJ61 603 aaPredicted RBP16.3■□□□□ 0.2
USH1C-203ENST00000526181 ARHGAP39Q9C0H5 1083 aa16.3■□□□□ 0.2
USH1C-203ENST00000526181 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
USH1C-203ENST00000526181 PHIPQ8WWQ0 1821 aa16.3■□□□□ 0.2
USH1C-203ENST00000526181 ADGRA2Q96PE1 1338 aa16.29■□□□□ 0.2
USH1C-203ENST00000526181 DDX60LQ5H9U9 1706 aaKnown RBP16.29■□□□□ 0.2
USH1C-203ENST00000526181 ECM2O94769 699 aaPredicted RBP16.29■□□□□ 0.2
USH1C-203ENST00000526181 CYP2C8P10632 490 aa16.29■□□□□ 0.2
USH1C-203ENST00000526181 SOX10P56693 466 aa16.29■□□□□ 0.2
USH1C-203ENST00000526181 TMED8Q6PL24 325 aaPredicted RBP16.29■□□□□ 0.2
USH1C-203ENST00000526181 GADL1Q6ZQY3 521 aa16.29■□□□□ 0.2
USH1C-203ENST00000526181 METTL16Q86W50 562 aaKnown RBP16.29■□□□□ 0.2
USH1C-203ENST00000526181 LCORLQ8N3X6 602 aa16.29■□□□□ 0.2
USH1C-203ENST00000526181 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
USH1C-203ENST00000526181 ZSWIM8A7E2V4 1837 aa16.29■□□□□ 0.2
USH1C-203ENST00000526181 GDF11O95390 407 aa16.28■□□□□ 0.2
USH1C-203ENST00000526181 HLA-DOAP06340 250 aa16.28■□□□□ 0.2
USH1C-203ENST00000526181 EVX2Q03828 476 aa16.28■□□□□ 0.2
USH1C-203ENST00000526181 CERS3Q8IU89 383 aa16.28■□□□□ 0.2
USH1C-203ENST00000526181 FOXP4Q8IVH2 680 aaPredicted RBP16.28■□□□□ 0.2
USH1C-203ENST00000526181 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
USH1C-203ENST00000526181 EFCC1Q9HA90 598 aa16.28■□□□□ 0.2
USH1C-203ENST00000526181 ECHDC1Q9NTX5 307 aa16.28■□□□□ 0.2
USH1C-203ENST00000526181 ATAD5Q96QE3 1844 aa16.28■□□□□ 0.2
USH1C-203ENST00000526181 ADD2P35612 726 aa16.27■□□□□ 0.2
USH1C-203ENST00000526181 SPP2Q13103 211 aa16.27■□□□□ 0.2
USH1C-203ENST00000526181 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
USH1C-203ENST00000526181 C17orf99Q6UX52 265 aa16.27■□□□□ 0.2
USH1C-203ENST00000526181 FASTKD5Q7L8L6 764 aaKnown RBP16.27■□□□□ 0.2
USH1C-203ENST00000526181 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.2
USH1C-203ENST00000526181 ARMT1Q9H993 441 aa16.27■□□□□ 0.2
USH1C-203ENST00000526181 PTPN22Q9Y2R2 807 aa16.27■□□□□ 0.2
USH1C-203ENST00000526181 USP17L5A8MUK1 530 aa16.26■□□□□ 0.19
USH1C-203ENST00000526181 CTGFP29279 349 aa16.26■□□□□ 0.19
USH1C-203ENST00000526181 PLCD1P51178 756 aa16.26■□□□□ 0.19
USH1C-203ENST00000526181 LACTBP83111 547 aaPredicted RBP16.26■□□□□ 0.19
USH1C-203ENST00000526181 ZNF280CQ8ND82 737 aa16.26■□□□□ 0.19
USH1C-203ENST00000526181 OTUD7AQ8TE49 926 aaPredicted RBP16.26■□□□□ 0.19
USH1C-203ENST00000526181 PARK7Q99497 189 aaKnown RBP16.26■□□□□ 0.19
USH1C-203ENST00000526181 CRNKL1Q9BZJ0 848 aaKnown RBP16.26■□□□□ 0.19
USH1C-203ENST00000526181 NAV1Q8NEY1 1877 aa16.25■□□□□ 0.19
USH1C-203ENST00000526181 PRKAB2O43741 272 aa16.25■□□□□ 0.19
USH1C-203ENST00000526181 MBD4O95243 580 aa16.25■□□□□ 0.19
USH1C-203ENST00000526181 HMGCS2P54868 508 aa16.25■□□□□ 0.19
USH1C-203ENST00000526181 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.25■□□□□ 0.19
USH1C-203ENST00000526181 SERPINB13Q9UIV8 391 aa16.25■□□□□ 0.19
USH1C-203ENST00000526181 ZBTB21Q9ULJ3 1066 aa16.25■□□□□ 0.19
USH1C-203ENST00000526181 AGTPBP1Q9UPW5 1226 aa16.25■□□□□ 0.19
USH1C-203ENST00000526181 LOC285556D6RIA3 1793 aa16.24■□□□□ 0.19
USH1C-203ENST00000526181 CYP2D6P10635 497 aa16.24■□□□□ 0.19
USH1C-203ENST00000526181 RGS19P49795 217 aa16.24■□□□□ 0.19
USH1C-203ENST00000526181 MTMR2Q13614 643 aa16.24■□□□□ 0.19
USH1C-203ENST00000526181 TATDN1Q6P1N9 297 aa16.24■□□□□ 0.19
USH1C-203ENST00000526181 TTC6Q86TZ1 520 aa16.24■□□□□ 0.19
USH1C-203ENST00000526181 EHD4Q9H223 541 aa16.24■□□□□ 0.19
USH1C-203ENST00000526181 MCM9Q9NXL9 1143 aa16.24■□□□□ 0.19
USH1C-203ENST00000526181 PTPRFP10586 1907 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 GH2P01242 217 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 POLR3DP05423 398 aaPredicted RBP16.23■□□□□ 0.19
USH1C-203ENST00000526181 ASNSP08243 561 aa16.23■□□□□ 0.19
USH1C-203ENST00000526181 BCRP11274 1271 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms