RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 PRDM10Q9NQV6 1147 aa4.81□□□□□ -1.64
ECHDC1-218ENST00000525745 MBNL3Q9NUK0 354 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-218ENST00000525745 FAM8A1Q9UBU6 413 aa4.81□□□□□ -1.64
ECHDC1-218ENST00000525745 GTF2IRD1Q9UHL9 959 aa4.81□□□□□ -1.64
ECHDC1-218ENST00000525745 ADAMTS6Q9UKP5 1117 aa4.81□□□□□ -1.64
ECHDC1-218ENST00000525745 TTF2Q9UNY4 1162 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-218ENST00000525745 FANCGO15287 622 aa4.8□□□□□ -1.64
ECHDC1-218ENST00000525745 P4HBP07237 508 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-218ENST00000525745 ANGEL2Q5VTE6 544 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-218ENST00000525745 LRRN4CLQ8ND94 238 aa4.8□□□□□ -1.64
ECHDC1-218ENST00000525745 KRTAP9-9Q9BYP9 154 aa4.8□□□□□ -1.64
ECHDC1-218ENST00000525745 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
ECHDC1-218ENST00000525745 CYP8B1Q9UNU6 501 aa4.8□□□□□ -1.64
ECHDC1-218ENST00000525745 GNAT3A8MTJ3 354 aa4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 LDHBP07195 334 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 RING1Q06587 406 aa4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 IKZF1Q13422 519 aa4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 INPP5AQ14642 412 aa4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 ARMCX6Q7L4S7 300 aa4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 ATG4DQ86TL0 474 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 HOMEZQ8IX15 550 aa4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 KCT2Q8NC54 265 aa4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 PRDM7Q9NQW5 492 aa4.79□□□□□ -1.64
ECHDC1-218ENST00000525745 IGF2BP3O00425 579 aaKnown RBP eCLIP4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 C8AP07357 584 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 PTPN11Q06124 597 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 LRFN4Q6PJG9 635 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 FAM214BQ7L5A3 538 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 HDXQ7Z353 690 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 SPACA3Q8IXA5 215 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 POU5F2Q8N7G0 328 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 ZNF507Q8TCN5 953 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 ANKRD24Q8TF21 1146 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 ASB11Q8WXH4 323 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 FAM168AQ92567 244 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 PLPPR2Q96GM1 343 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 TNKS2Q9H2K2 1166 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 PRDM5Q9NQX1 630 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 TPX2Q9ULW0 747 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 SNX11Q9Y5W9 270 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 CARMIL2Q6F5E8 1435 aa4.78□□□□□ -1.64
ECHDC1-218ENST00000525745 LRIG2O94898 1065 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 EOMESO95936 686 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 LMNB1P20700 586 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 EIF4BP23588 611 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 ETF1P62495 437 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 ZP2Q05996 745 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 NKPD1Q17RQ9 610 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 WIPI1Q5MNZ9 446 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 ZNF648Q5T619 568 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 SCARA3Q6AZY7 606 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 TTBK2Q6IQ55 1244 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 SLC23A3Q6PIS1 610 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 SV2BQ7L1I2 683 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 MIPEPQ99797 713 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 TRAIPQ9BWF2 469 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 FBRSQ9HAH7 460 aa4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-218ENST00000525745 FAM155AB1AL88 458 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 SLITRK5O94991 958 aa4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 GNA15P30679 374 aa4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 CDK8P49336 464 aa4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 FZD5Q13467 585 aa4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 CCDC85BQ15834 202 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 GAL3ST3Q96A11 431 aa4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 FRMD6Q96NE9 622 aa4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 FOXQ1Q9C009 403 aa4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 MAPK8IP1Q9UQF2 711 aa4.76□□□□□ -1.65
ECHDC1-218ENST00000525745 CLCN7P51798 805 aa4.75□□□□□ -1.65
ECHDC1-218ENST00000525745 MAP3K11Q16584 847 aa4.75□□□□□ -1.65
ECHDC1-218ENST00000525745 NKG7Q16617 165 aa4.75□□□□□ -1.65
ECHDC1-218ENST00000525745 CDKAL1Q5VV42 579 aa4.75□□□□□ -1.65
ECHDC1-218ENST00000525745 CYFIP1Q7L576 1253 aa4.75□□□□□ -1.65
ECHDC1-218ENST00000525745 XAGE3Q8WTP9 111 aa4.75□□□□□ -1.65
ECHDC1-218ENST00000525745 WNT10AQ9GZT5 417 aa4.75□□□□□ -1.65
ECHDC1-218ENST00000525745 PITPNM2Q9BZ72 1349 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 PRR33A8MZF0 331 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 PRPF40AO75400 957 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 GRK4P32298 578 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 FGD1P98174 961 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 SEPT6Q14141 434 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 SLBPQ14493 270 aaKnown RBP eCLIP4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 ZNF124Q15973 351 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 SFRP5Q5T4F7 317 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 AEBP1Q8IUX7 1158 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 HID1Q8IV36 788 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 MFSD4AQ8N468 514 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 HSPA12BQ96MM6 686 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 DUSP9Q99956 384 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 RNF19AQ9NV58 838 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 PCDHB5Q9Y5E4 795 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 SNCAIPQ9Y6H5 919 aa4.74□□□□□ -1.65
ECHDC1-218ENST00000525745 PATL2C9JE40 543 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-218ENST00000525745 H3BS24 57 aa4.73□□□□□ -1.65
ECHDC1-218ENST00000525745 FARP2O94887 1054 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-218ENST00000525745 CBX7O95931 251 aa4.73□□□□□ -1.65
ECHDC1-218ENST00000525745 JAG1P78504 1218 aa4.73□□□□□ -1.65
ECHDC1-218ENST00000525745 EAPPQ56P03 285 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-218ENST00000525745 PRAMEF13Q5VWM6 474 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms