RNA–Protein interactions for RNA: ENST00000525428.5

CLNS1A-204, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLNS1A, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-204ENST00000525428 A0A1W2PQ27 194 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 A0A1W2PQ64 194 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 A0A1W2PQD8 194 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 PPP1R12AO14974 1030 aaPredicted RBP12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 MAP9Q49MG5 647 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 ACRBPQ8NEB7 543 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 VEZTQ9HBM0 779 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 ADGRG1Q9Y653 693 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 PRAMEF22A3QJZ6 481 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 ENC1O14682 589 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 SSBP05455 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 POTEDQ86YR6 584 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 CAPS2Q9BXY5 557 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 HMG20BQ9P0W2 317 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 ODF2LQ9ULJ1 636 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 MROH7-TTC4A0A0A0MT08 1334 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 HIP1O00291 1037 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 SKAP2O75563 359 aaPredicted RBP12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 KIAA0754O94854 1291 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 PRPF38AQ8NAV1 312 aaKnown RBP12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 CCDC148Q8NFR7 591 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 CERKQ8TCT0 537 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 KCNG4Q8TDN1 519 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 CAPZA3Q96KX2 299 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 NFE2L3Q9Y4A8 694 aa12.78□□□□□ -0.36
CLNS1A-204ENST00000525428 KAT6BQ8WYB5 2073 aa12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 MEGF6O75095 1541 aa12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 WDR17Q8IZU2 1322 aa12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 A0A0G2JS52 829 aa12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 NDUFAB1O14561 156 aa12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 FOXN1O15353 648 aa12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 PFKFB2O60825 505 aa12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 TBX2Q13207 712 aaPredicted RBP12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 KRT32Q14532 448 aa12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 RNF187Q5TA31 235 aaPredicted RBP12.77□□□□□ -0.36
CLNS1A-204ENST00000525428 RNMTO43148 476 aaKnown RBP12.77□□□□□ -0.37
CLNS1A-204ENST00000525428 ZEB2O60315 1214 aa12.77□□□□□ -0.37
CLNS1A-204ENST00000525428 AKAP4Q5JQC9 854 aa12.77□□□□□ -0.37
CLNS1A-204ENST00000525428 SPECC1Q5M775 1068 aa12.77□□□□□ -0.37
CLNS1A-204ENST00000525428 STOX1Q6ZVD7 989 aa12.77□□□□□ -0.37
CLNS1A-204ENST00000525428 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
CLNS1A-204ENST00000525428 ALDH8A1Q9H2A2 487 aaPredicted RBP12.77□□□□□ -0.37
CLNS1A-204ENST00000525428 CPDO75976 1380 aa12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 SRGAP2O75044 1071 aa12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 NAPGQ99747 312 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 SAMSN1Q9NSI8 373 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 C9orf78Q9NZ63 289 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 HDAC6Q9UBN7 1215 aa12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 PCDHA5Q9Y5H7 936 aa12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 A0A0G2JLW4 131 aa12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 AKR1B15C9JRZ8 316 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 TEX33O43247 280 aa12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 FOXP4Q8IVH2 680 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 MSL3Q8N5Y2 521 aaKnown RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 FAXDC2Q96IV6 333 aa12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 C8orf37Q96NL8 207 aa12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
CLNS1A-204ENST00000525428 BTBD11A6QL63 1104 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 IRF6O14896 467 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 MRPS25P82663 173 aaKnown RBP12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 FMR1Q06787 632 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 RBL2Q08999 1139 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 AMOTQ4VCS5 1084 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 ATL3Q6DD88 541 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 COG1Q8WTW3 980 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 MYBL2P10244 700 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 BMP6P22004 513 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 ATP1A2P50993 1020 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 PDCLQ13371 301 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 PPFIBP1Q86W92 1011 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 C8orf76Q96K31 380 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 GOLGA6BA6NDN3 693 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 AGPSO00116 658 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 FDPSP14324 419 aaKnown RBP12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 PHKG2P15735 406 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 AARSP49588 968 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 TRDNQ13061 729 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 MYSM1Q5VVJ2 828 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 MCM8Q9UJA3 840 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 MYO6Q9UM54 1294 aa12.75□□□□□ -0.37
CLNS1A-204ENST00000525428 CHUKO15111 745 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 EIF3HO15372 352 aaKnown RBP eCLIP12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 ALDH1L1O75891 902 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 RPSAP08865 295 aaKnown RBP12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 HSPA1LP34931 641 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 E2F5Q15329 346 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 HOOK1Q9UJC3 728 aaKnown RBP12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 COL15A1P39059 1388 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 CARMIL3Q8ND23 1372 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 PHRF1Q9P1Y6 1649 aaKnown RBP12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 SHOX2O60902 331 aaPredicted RBP12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 SASH1O94885 1247 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 CMA1P23946 247 aa12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 SARNPP82979 210 aaKnown RBP12.74□□□□□ -0.37
CLNS1A-204ENST00000525428 MAP2K1Q02750 393 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms