RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 XAGE2Q96GT9 111 aa8□□□□□ -1.13
NUP98-213ENST00000524563 TRIM34Q9BYJ4 488 aa8□□□□□ -1.13
NUP98-213ENST00000524563 CHMP4BQ9H444 224 aaKnown RBP8□□□□□ -1.13
NUP98-213ENST00000524563 PNMA3Q9UL41 463 aa8□□□□□ -1.13
NUP98-213ENST00000524563 KCNH4Q9UQ05 1017 aa8□□□□□ -1.13
NUP98-213ENST00000524563 COLQQ9Y215 455 aaPredicted RBP8□□□□□ -1.13
NUP98-213ENST00000524563 NR2E3Q9Y5X4 410 aa8□□□□□ -1.13
NUP98-213ENST00000524563 BRCA2P51587 3418 aa8□□□□□ -1.13
NUP98-213ENST00000524563 ADGRA2Q96PE1 1338 aa8□□□□□ -1.13
NUP98-213ENST00000524563 FXR1P51114 621 aaKnown RBP eCLIP7.99□□□□□ -1.13
NUP98-213ENST00000524563 TNNI3KQ59H18 835 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 CCDC102BQ68D86 513 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 C17orf99Q6UX52 265 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 EXOC6Q8TAG9 804 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 COA7Q96BR5 231 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 SHISA4Q96DD7 197 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 NEUROD6Q96NK8 337 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 CWC22Q9HCG8 908 aaKnown RBP7.99□□□□□ -1.13
NUP98-213ENST00000524563 GPR108Q9NPR9 543 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 AKAP2Q9Y2D5 859 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 ZHX2Q9Y6X8 837 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 FPGT-TNNI3KV9GXZ4 949 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 MROH7-TTC4A0A0A0MT08 1334 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 SALL1Q9NSC2 1324 aa7.99□□□□□ -1.13
NUP98-213ENST00000524563 RFX7Q2KHR2 1363 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 BAZ2AQ9UIF9 1905 aaKnown RBP7.98□□□□□ -1.13
NUP98-213ENST00000524563 A0A0G2JLL6 359 aaPredicted RBP7.98□□□□□ -1.13
NUP98-213ENST00000524563 CXCL11O14625 94 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 ADCY3O60266 1144 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 HMMRO75330 724 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 ENTPD3O75355 529 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 INHAP05111 366 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 GSTO1P78417 241 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 RASGRF1Q13972 1273 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 PRRT2Q7Z6L0 340 aaPredicted RBP7.98□□□□□ -1.13
NUP98-213ENST00000524563 EAF2Q96CJ1 260 aaPredicted RBP7.98□□□□□ -1.13
NUP98-213ENST00000524563 DBNDD2Q9BQY9 259 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 MRIQ9BWK5 157 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 TLR7Q9NYK1 1049 aaKnown RBP7.98□□□□□ -1.13
NUP98-213ENST00000524563 RAI14Q9P0K7 980 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 FAM198AQ9UFP1 575 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 PCDHB15Q9Y5E8 787 aa7.98□□□□□ -1.13
NUP98-213ENST00000524563 FAM196BA6NMK8 535 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 APBB1O00213 710 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 EVI5O60447 810 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 GJB1P08034 283 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 ELNP15502 786 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 PTPRAP18433 802 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 ARID4AP29374 1257 aaPredicted RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 HOXD11P31277 338 aaPredicted RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 MCAMP43121 646 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 IRX3P78415 501 aaPredicted RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 PABPC4Q13310 644 aaKnown RBP eCLIP7.97□□□□□ -1.13
NUP98-213ENST00000524563 PI16Q6UXB8 463 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 CCDC84Q86UT8 332 aaPredicted RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 ERC1Q8IUD2 1116 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 CCAR1Q8IX12 1150 aaKnown RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 ANKRD13CQ8N6S4 541 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 RHPN1Q8TCX5 695 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 U2AF1L4Q8WU68 220 aaKnown RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 UNC93B1Q9H1C4 597 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.97□□□□□ -1.132e-7■■□□□ 11.6
NUP98-213ENST00000524563 IL1RAPL2Q9NP60 686 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 ZNF112Q9UJU3 913 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 DBNLQ9UJU6 430 aaKnown RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 AGTPBP1Q9UPW5 1226 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 COL2A1P02458 1487 aaPredicted RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 PLXNA1Q9UIW2 1896 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 ZNFX1Q9P2E3 1918 aaKnown RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 GAKO14976 1311 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 PDS5AQ29RF7 1337 aaKnown RBP7.97□□□□□ -1.13
NUP98-213ENST00000524563 ATRNL1Q5VV63 1379 aa7.97□□□□□ -1.13
NUP98-213ENST00000524563 COL11A1P12107 1806 aaPredicted RBP7.96□□□□□ -1.13
NUP98-213ENST00000524563 CTNND1O60716 968 aaKnown RBP7.96□□□□□ -1.14
NUP98-213ENST00000524563 TFRCP02786 760 aaKnown RBP7.96□□□□□ -1.14
NUP98-213ENST00000524563 LDHCP07864 332 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 BCRP11274 1271 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 CTGFP29279 349 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 GJA8P48165 433 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 FLT3LGP49771 235 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 ZFPM1Q8IX07 1006 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 TEX11Q8IYF3 940 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 CRACR2BQ8N4Y2 399 aaPredicted RBP7.96□□□□□ -1.14
NUP98-213ENST00000524563 KIF1BPQ96EK5 621 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 DEFB118Q96PH6 123 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 IDI2Q9BXS1 227 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 CCDC8Q9H0W5 538 aaPredicted RBP7.96□□□□□ -1.14
NUP98-213ENST00000524563 AS3MTQ9HBK9 375 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 TMOD4Q9NZQ9 345 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 HMG20BQ9P0W2 317 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 GABRQQ9UN88 632 aa7.96□□□□□ -1.14
NUP98-213ENST00000524563 DDTLA6NHG4 134 aaPredicted RBP7.95□□□□□ -1.14
NUP98-213ENST00000524563 SMARCA5O60264 1052 aaPredicted RBP7.95□□□□□ -1.14
NUP98-213ENST00000524563 HMGCRP04035 888 aa7.95□□□□□ -1.14
NUP98-213ENST00000524563 HMGCS2P54868 508 aa7.95□□□□□ -1.14
NUP98-213ENST00000524563 MECOMQ03112 1051 aa7.95□□□□□ -1.14
NUP98-213ENST00000524563 FAM110CQ1W6H9 321 aa7.95□□□□□ -1.14
NUP98-213ENST00000524563 HSP90AB4PQ58FF6 505 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms