RNA–Protein interactions for RNA: ENST00000524192.6

ARFGAP1-219, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 980 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-219ENST00000524192 GCLCP48506 637 aaPredicted RBP17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 GSTO1P78417 241 aa17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 SPP2Q13103 211 aa17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 PABPC4Q13310 644 aaKnown RBP eCLIP17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 CCDC84Q86UT8 332 aaPredicted RBP17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 TRMT2AQ8IZ69 625 aaKnown RBP17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 ZNF280CQ8ND82 737 aa17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 CDCA7LQ96GN5 454 aa17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 COL2A1P02458 1487 aaPredicted RBP17.87■□□□□ 0.45
ARFGAP1-219ENST00000524192 LAMA3Q16787 3333 aa17.86■□□□□ 0.45
ARFGAP1-219ENST00000524192 TFCP2Q12800 502 aa17.86■□□□□ 0.45
ARFGAP1-219ENST00000524192 NECAB2Q7Z6G3 386 aa17.86■□□□□ 0.45
ARFGAP1-219ENST00000524192 ZNF384Q8TF68 577 aa17.86■□□□□ 0.45
ARFGAP1-219ENST00000524192 PAWRQ96IZ0 340 aaKnown RBP17.86■□□□□ 0.45
ARFGAP1-219ENST00000524192 MEIS3Q99687 375 aa17.86■□□□□ 0.45
ARFGAP1-219ENST00000524192 ALPK3Q96L96 1907 aa17.86■□□□□ 0.45
ARFGAP1-219ENST00000524192 FAM196BA6NMK8 535 aa17.85■□□□□ 0.45
ARFGAP1-219ENST00000524192 SRGAP3O43295 1099 aa17.85■□□□□ 0.45
ARFGAP1-219ENST00000524192 ANKLE1Q8NAG6 615 aa17.85■□□□□ 0.45
ARFGAP1-219ENST00000524192 NSUN4Q96CB9 384 aaKnown RBP17.85■□□□□ 0.45
ARFGAP1-219ENST00000524192 NEUROD6Q96NK8 337 aa17.85■□□□□ 0.45
ARFGAP1-219ENST00000524192 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.85■□□□□ 0.453e-16■■■□□ 14.6
ARFGAP1-219ENST00000524192 HMG20BQ9P0W2 317 aa17.85■□□□□ 0.45
ARFGAP1-219ENST00000524192 COL6A3P12111 3177 aa17.84■□□□□ 0.45
ARFGAP1-219ENST00000524192 USP17L5A8MUK1 530 aa17.84■□□□□ 0.45
ARFGAP1-219ENST00000524192 HMGCRP04035 888 aa17.84■□□□□ 0.45
ARFGAP1-219ENST00000524192 GNAI3P08754 354 aa17.84■□□□□ 0.45
ARFGAP1-219ENST00000524192 CAP2P40123 477 aa17.84■□□□□ 0.45
ARFGAP1-219ENST00000524192 HMGCS2P54868 508 aa17.84■□□□□ 0.45
ARFGAP1-219ENST00000524192 MTX1Q13505 466 aa17.84■□□□□ 0.45
ARFGAP1-219ENST00000524192 SPATA5Q8NB90 893 aa17.84■□□□□ 0.45
ARFGAP1-219ENST00000524192 SH3D19Q5HYK7 790 aa17.83■□□□□ 0.44
ARFGAP1-219ENST00000524192 GORABQ5T7V8 394 aa17.83■□□□□ 0.44
ARFGAP1-219ENST00000524192 AS3MTQ9HBK9 375 aa17.83■□□□□ 0.44
ARFGAP1-219ENST00000524192 STAP2Q9UGK3 403 aa17.83■□□□□ 0.44
ARFGAP1-219ENST00000524192 HERC5Q9UII4 1024 aaKnown RBP17.83■□□□□ 0.44
ARFGAP1-219ENST00000524192 RPTORQ8N122 1335 aa17.82■□□□□ 0.44
ARFGAP1-219ENST00000524192 TBC1D9Q6ZT07 1266 aa17.82■□□□□ 0.44
ARFGAP1-219ENST00000524192 ARHGAP45Q92619 1136 aa17.82■□□□□ 0.44
ARFGAP1-219ENST00000524192 ASCC2Q9H1I8 757 aaPredicted RBP17.82■□□□□ 0.44
ARFGAP1-219ENST00000524192 HMX1Q9NP08 348 aaPredicted RBP17.82■□□□□ 0.44
ARFGAP1-219ENST00000524192 RAI14Q9P0K7 980 aa17.82■□□□□ 0.44
ARFGAP1-219ENST00000524192 GJD2Q9UKL4 321 aa17.82■□□□□ 0.44
ARFGAP1-219ENST00000524192 ARID4AP29374 1257 aaPredicted RBP17.81■□□□□ 0.44
ARFGAP1-219ENST00000524192 BMP8BP34820 402 aa17.81■□□□□ 0.44
ARFGAP1-219ENST00000524192 PI16Q6UXB8 463 aa17.81■□□□□ 0.44
ARFGAP1-219ENST00000524192 TEX11Q8IYF3 940 aa17.81■□□□□ 0.44
ARFGAP1-219ENST00000524192 DIS3LQ8TF46 1054 aaKnown RBP17.81■□□□□ 0.44
ARFGAP1-219ENST00000524192 PI4KBQ9UBF8 816 aa17.81■□□□□ 0.44
ARFGAP1-219ENST00000524192 MORF4L1Q9UBU8 362 aa17.81■□□□□ 0.44
ARFGAP1-219ENST00000524192 A0A0C4DFX4 3053 aa17.81■□□□□ 0.44
ARFGAP1-219ENST00000524192 PLXNB2O15031 1838 aa17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 SOX1O00570 391 aaPredicted RBP17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 RRP1BQ14684 758 aaKnown RBP17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 SLC17A8Q8NDX2 589 aa17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 GDF15Q99988 308 aa17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 NOL10Q9BSC4 688 aaKnown RBP17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 WDR18Q9BV38 432 aa17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 NBPF3Q9H094 633 aa17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 DHX36Q9H2U1 1008 aaKnown RBP17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 LRP2BPQ9P2M1 347 aa17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.8■□□□□ 0.44
ARFGAP1-219ENST00000524192 ASNSP08243 561 aa17.79■□□□□ 0.44
ARFGAP1-219ENST00000524192 UQCRFS1P1P0C7P4 283 aa17.79■□□□□ 0.44
ARFGAP1-219ENST00000524192 IRX3P78415 501 aaPredicted RBP17.79■□□□□ 0.44
ARFGAP1-219ENST00000524192 DDX60LQ5H9U9 1706 aaKnown RBP17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 BAG3O95817 575 aa17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 PLCG2P16885 1265 aa17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 HOXA7P31268 230 aaPredicted RBP17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 MCAMP43121 646 aa17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 BACE1P56817 501 aa17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 C7orf61Q8IZ16 206 aa17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 SH3RF3Q8TEJ3 882 aaPredicted RBP17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 LRCH3Q96II8 777 aa17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 TMOD4Q9NZQ9 345 aa17.78■□□□□ 0.44
ARFGAP1-219ENST00000524192 SIPA1L1O43166 1804 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 C19orf81C9J6K1 198 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 TRIM32Q13049 653 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 G3BP1Q13283 466 aaKnown RBP eCLIP17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 MTMR2Q13614 643 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 GPR153Q6NV75 609 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 FOXP4Q8IVH2 680 aaPredicted RBP17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 SOCS4Q8WXH5 440 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 TRIB2Q92519 343 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 NUDT12Q9BQG2 462 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 C11orf49Q9H6J7 331 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 GINM1Q9NU53 330 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 OGDHLQ9ULD0 1010 aa17.77■□□□□ 0.44
ARFGAP1-219ENST00000524192 CDK5RAP2Q96SN8 1893 aa17.77■□□□□ 0.43
ARFGAP1-219ENST00000524192 DLL1O00548 723 aa17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 GNAI2P04899 355 aa17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 XRCC5P13010 732 aaKnown RBP17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 CYP2B6P20813 491 aa17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 MNX1P50219 401 aaPredicted RBP17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 PPP4CP60510 307 aa17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 MAP3K21Q5TCX8 1036 aa17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 NAA16Q6N069 864 aaPredicted RBP17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 TRMT44Q8IYL2 757 aaKnown RBP17.76■□□□□ 0.43
ARFGAP1-219ENST00000524192 GPRC5AQ8NFJ5 357 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms