RNA–Protein interactions for RNA: ENST00000523676.5

TOP1MT-218, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 5 BASIC

Gene TOP1MT, Length 1,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-218ENST00000523676 FAM196BA6NMK8 535 aa21.46■■□□□ 1.03
TOP1MT-218ENST00000523676 TNNI2P48788 182 aa21.46■■□□□ 1.03
TOP1MT-218ENST00000523676 TTC6Q86TZ1 520 aa21.46■■□□□ 1.03
TOP1MT-218ENST00000523676 PNMA8AQ86V59 439 aaPredicted RBP21.46■■□□□ 1.03
TOP1MT-218ENST00000523676 APOBEC3FQ8IUX4 373 aaKnown RBP21.46■■□□□ 1.03
TOP1MT-218ENST00000523676 DHX36Q9H2U1 1008 aaKnown RBP21.46■■□□□ 1.03
TOP1MT-218ENST00000523676 ATRNL1Q5VV63 1379 aa21.45■■□□□ 1.03
TOP1MT-218ENST00000523676 HLA-DOAP06340 250 aa21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 CPA1P15085 419 aa21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 AKNAD1Q5T1N1 836 aa21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 DCPSQ96C86 337 aaKnown RBP21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 JAKMIP1Q96N16 626 aaKnown RBP21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 TOMM22Q9NS69 142 aa21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 ANAPC15P60006 121 aa21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 TSGA10IPQ3SY00 556 aa21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 RRP12Q5JTH9 1297 aaKnown RBP21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 TEPSINQ96N21 525 aa21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 CLEC11AQ9Y240 323 aa21.45■■□□□ 1.02
TOP1MT-218ENST00000523676 ADM5C9JUS6 153 aa21.44■■□□□ 1.02
TOP1MT-218ENST00000523676 MFSD6Q6ZSS7 791 aa21.44■■□□□ 1.02
TOP1MT-218ENST00000523676 STAG1Q8WVM7 1258 aa21.44■■□□□ 1.02
TOP1MT-218ENST00000523676 UPF3BQ9BZI7 483 aaKnown RBP21.44■■□□□ 1.02
TOP1MT-218ENST00000523676 PI4KBQ9UBF8 816 aa21.44■■□□□ 1.02
TOP1MT-218ENST00000523676 PGAP2Q9UHJ9 254 aa21.44■■□□□ 1.02
TOP1MT-218ENST00000523676 SERPINB13Q9UIV8 391 aa21.44■■□□□ 1.02
TOP1MT-218ENST00000523676 ROBO3Q96MS0 1386 aa21.44■■□□□ 1.02
TOP1MT-218ENST00000523676 DNAJC18Q9H819 358 aa21.43■■□□□ 1.02
TOP1MT-218ENST00000523676 PITPNM2Q9BZ72 1349 aa21.43■■□□□ 1.02
TOP1MT-218ENST00000523676 COL2A1P02458 1487 aaPredicted RBP21.43■■□□□ 1.02
TOP1MT-218ENST00000523676 CASTP20810 708 aaKnown RBP21.43■■□□□ 1.02
TOP1MT-218ENST00000523676 MIGA2Q7L4E1 593 aa21.43■■□□□ 1.02
TOP1MT-218ENST00000523676 KRT26Q7Z3Y9 468 aa21.43■■□□□ 1.02
TOP1MT-218ENST00000523676 SULF1Q8IWU6 871 aa21.43■■□□□ 1.02
TOP1MT-218ENST00000523676 ZC3H15Q8WU90 426 aaKnown RBP21.43■■□□□ 1.02
TOP1MT-218ENST00000523676 B4E1Z4 1266 aa21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 SLC3A2P08195 630 aaKnown RBP21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 CDK8P49336 464 aa21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 GABPAQ06546 454 aa21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 NBPF12Q5TAG4 269 aaPredicted RBP21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 C16orf86Q6ZW13 317 aa21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 CRACR2BQ8N4Y2 399 aaPredicted RBP21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 TCEANC2Q96MN5 208 aa21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 NEK1Q96PY6 1258 aa21.42■■□□□ 1.02
TOP1MT-218ENST00000523676 KRT32Q14532 448 aa21.41■■□□□ 1.02
TOP1MT-218ENST00000523676 MAP1SQ66K74 1059 aaPredicted RBP21.41■■□□□ 1.02
TOP1MT-218ENST00000523676 CHST3Q7LGC8 479 aa21.41■■□□□ 1.02
TOP1MT-218ENST00000523676 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.41■■□□□ 1.02
TOP1MT-218ENST00000523676 PDE4BQ07343 736 aa21.41■■□□□ 1.02
TOP1MT-218ENST00000523676 GLIS2Q9BZE0 524 aaPredicted RBP21.41■■□□□ 1.02
TOP1MT-218ENST00000523676 RNF41Q9H4P4 317 aaPredicted RBP21.41■■□□□ 1.02
TOP1MT-218ENST00000523676 MKNK2Q9HBH9 465 aa21.41■■□□□ 1.02
TOP1MT-218ENST00000523676 KDM4AO75164 1064 aa21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 TRDNQ13061 729 aa21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 RALYLQ86SE5 291 aaKnown RBP21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 USP48Q86UV5 1035 aa21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 NCOA7Q8NI08 942 aa21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 IL17RAQ96F46 866 aa21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 EHD4Q9H223 541 aa21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 FZD1Q9UP38 647 aa21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 MYH8P13535 1937 aa21.4■■□□□ 1.02
TOP1MT-218ENST00000523676 RANBP6O60518 1105 aaKnown RBP21.39■■□□□ 1.02
TOP1MT-218ENST00000523676 FGRP09769 529 aa21.39■■□□□ 1.02
TOP1MT-218ENST00000523676 FAM47AQ5JRC9 791 aa21.39■■□□□ 1.02
TOP1MT-218ENST00000523676 TRIM34Q9BYJ4 488 aa21.39■■□□□ 1.02
TOP1MT-218ENST00000523676 GPBP1L1Q9HC44 474 aaPredicted RBP21.39■■□□□ 1.02
TOP1MT-218ENST00000523676 SHMT1P34896 483 aa21.39■■□□□ 1.01
TOP1MT-218ENST00000523676 IPO9Q96P70 1041 aaKnown RBP21.39■■□□□ 1.01
TOP1MT-218ENST00000523676 RASA1P20936 1047 aa21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 PSMA5P28066 241 aa21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 BLOC1S2Q6QNY1 142 aa21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 CYB5R4Q7L1T6 521 aa21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 FOXP4Q8IVH2 680 aaPredicted RBP21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 MB21D2Q8IYB1 491 aaPredicted RBP21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 LRRC2Q9BYS8 371 aa21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 ZSWIM6Q9HCJ5 1215 aa21.38■■□□□ 1.01
TOP1MT-218ENST00000523676 NEK4P51957 841 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 SHROOM1Q2M3G4 852 aaPredicted RBP21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 CNNM2Q9H8M5 875 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 ZSWIM5Q9P217 1185 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 ORC4O43929 436 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 RUFY3Q7L099 469 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 METTL16Q86W50 562 aaKnown RBP21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 ZKSCAN3Q9BRR0 538 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 TM6SF1Q9BZW5 370 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 KRT23Q9C075 422 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 SWAP70Q9UH65 585 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 PPP2R3BQ9Y5P8 575 aa21.37■■□□□ 1.01
TOP1MT-218ENST00000523676 SSC5DA1L4H1 1573 aa21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 ANTXR2P58335 489 aa21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 FMR1Q06787 632 aaKnown RBP eCLIP21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 LDHDQ86WU2 507 aa21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 ESR2Q92731 530 aa21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 HERC5Q9UII4 1024 aaKnown RBP21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 PCP11498 1178 aaKnown RBP21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 RPS6KB1P23443 525 aa21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 PRKG1Q13976 671 aa21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 RRP1BQ14684 758 aaKnown RBP21.36■■□□□ 1.01
TOP1MT-218ENST00000523676 RABEP1Q15276 862 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms