RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 CCER1Q8TC90 406 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 SCG3Q8WXD2 468 aaKnown RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 GUCD1Q96NT3 240 aa7.02□□□□□ -1.29
PABPC1-223ENST00000523636 ZSCAN10Q96SZ4 725 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 INSM2Q96T92 566 aaPredicted RBP7.02□□□□□ -1.29
PABPC1-223ENST00000523636 MRC1P22897 1456 aa7.02□□□□□ -1.29
PABPC1-223ENST00000523636 CACNA1BQ00975 2339 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 TMEM265A0A087WTH1 108 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 SRGNP10124 158 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 TEAD4Q15561 434 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 PRR5LQ6MZQ0 368 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 ZNF295-AS1Q8N0V1 137 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 RHBDD1Q8TEB9 315 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 RAPGEF4Q8WZA2 1011 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 ZNF333Q96JL9 665 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.01□□□□□ -1.294e-12■□□□□ 10.7
PABPC1-223ENST00000523636 ADARB2Q9NS39 739 aaKnown RBP7.01□□□□□ -1.29
PABPC1-223ENST00000523636 CHMP3Q9Y3E7 222 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 NCAPD2Q15021 1401 aa7.01□□□□□ -1.29
PABPC1-223ENST00000523636 SOS1Q07889 1333 aaPredicted RBP7.01□□□□□ -1.29
PABPC1-223ENST00000523636 CHD8Q9HCK8 2581 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 ZDBF2Q9HCK1 2354 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 SHTN1A0MZ66 631 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 SPATA31C2B4DYI2 1134 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 PPP1R12BO60237 982 aaPredicted RBP7□□□□□ -1.29
PABPC1-223ENST00000523636 FKBP5Q13451 457 aaPredicted RBP7□□□□□ -1.29
PABPC1-223ENST00000523636 CCDC93Q567U6 631 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 WDR44Q5JSH3 913 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 TMEM214Q6NUQ4 689 aaKnown RBP7□□□□□ -1.29
PABPC1-223ENST00000523636 TRIM46Q7Z4K8 759 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 UBE2Q1Q7Z7E8 422 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 TRPM4Q8TD43 1214 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 SHISA4Q96DD7 197 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 MPHOSPH9Q99550 1183 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 C2orf49Q9BVC5 232 aaPredicted RBP7□□□□□ -1.29
PABPC1-223ENST00000523636 BRIP1Q9BX63 1249 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 NIFKQ9BYG3 293 aaKnown RBP7□□□□□ -1.29
PABPC1-223ENST00000523636 POLMQ9NP87 494 aaPredicted RBP7□□□□□ -1.29
PABPC1-223ENST00000523636 GPRC5DQ9NZD1 345 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 RPTORQ8N122 1335 aa7□□□□□ -1.29
PABPC1-223ENST00000523636 UNC79Q9P2D8 2635 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 FKTNO75072 461 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 CTSOP43234 321 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-223ENST00000523636 GNASQ5JWF2 1037 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 STYK1Q6J9G0 422 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 USP48Q86UV5 1035 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 ALYREFQ86V81 257 aaKnown RBP6.99□□□□□ -1.29
PABPC1-223ENST00000523636 TICAM2Q86XR7 235 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 RNF217Q8TC41 542 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 CFHR5Q9BXR6 569 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 PCGF6Q9BYE7 350 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 GBA2Q9HCG7 927 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-223ENST00000523636 AAASQ9NRG9 546 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 NARFQ9UHQ1 456 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 PTPN22Q9Y2R2 807 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 TRIM17Q9Y577 477 aa6.99□□□□□ -1.29
PABPC1-223ENST00000523636 CENPJQ9HC77 1338 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-223ENST00000523636 KMT2BQ9UMN6 2715 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-223ENST00000523636 EPG5Q9HCE0 2579 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 SCN7AQ01118 1682 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 SERTM1A2A2V5 107 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 TTLL8A6PVC2 850 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 LGR5O75473 907 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 BMP1P13497 986 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 PDE6BP35913 854 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 C6orf118Q5T5N4 469 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 SOGA3Q5TF21 947 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 CDC37L1Q7L3B6 337 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 CERS3Q8IU89 383 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 DCAF11Q8TEB1 546 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 VTI1AQ96AJ9 217 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 PURBQ96QR8 312 aaKnown RBP6.98□□□□□ -1.29
PABPC1-223ENST00000523636 STAP2Q9UGK3 403 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 EGFL7Q9UHF1 273 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 USP3Q9Y6I4 520 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 IVNS1ABPQ9Y6Y0 642 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 DNAH14Q0VDD8 3507 aa6.98□□□□□ -1.29
PABPC1-223ENST00000523636 EML1O00423 815 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 ZNF609O15014 1411 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 NOS2P35228 1153 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 TBCELQ5QJ74 424 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 TBC1D9BQ66K14 1250 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 LYSMD3Q7Z3D4 306 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 ZFP42Q96MM3 310 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 ATP13A2Q9NQ11 1180 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 BRPF3Q9ULD4 1205 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 ZSWIM8A7E2V4 1837 aa6.97□□□□□ -1.29
PABPC1-223ENST00000523636 ZNF646O15015 1829 aaPredicted RBP6.97□□□□□ -1.29
PABPC1-223ENST00000523636 COL15A1P39059 1388 aa6.96□□□□□ -1.29
PABPC1-223ENST00000523636 ADM5C9JUS6 153 aa6.96□□□□□ -1.3
PABPC1-223ENST00000523636 PHKG2P15735 406 aa6.96□□□□□ -1.3
PABPC1-223ENST00000523636 TM4SF4P48230 202 aa6.96□□□□□ -1.3
PABPC1-223ENST00000523636 C1orf53Q5VUE5 145 aa6.96□□□□□ -1.3
PABPC1-223ENST00000523636 ZDHHC1Q8WTX9 485 aa6.96□□□□□ -1.3
PABPC1-223ENST00000523636 DPF3Q92784 378 aa6.96□□□□□ -1.3
PABPC1-223ENST00000523636 L3MBTL2Q969R5 705 aa6.96□□□□□ -1.3
PABPC1-223ENST00000523636 MASTLQ96GX5 879 aa6.96□□□□□ -1.3
PABPC1-223ENST00000523636 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.96□□□□□ -1.3
PABPC1-223ENST00000523636 LAMB1P07942 1786 aa6.95□□□□□ -1.3
PABPC1-223ENST00000523636 EGFRP00533 1210 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms