RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 DYMQ7RTS9 669 aa7.9□□□□□ -1.14
SKP1-211ENST00000523359 WDR89Q96FK6 387 aaPredicted RBP7.9□□□□□ -1.14
SKP1-211ENST00000523359 ACSBG1Q96GR2 724 aa7.9□□□□□ -1.14
SKP1-211ENST00000523359 TBC1D32Q96NH3 1257 aa7.9□□□□□ -1.14
SKP1-211ENST00000523359 CAPN10Q9HC96 672 aa7.9□□□□□ -1.14
SKP1-211ENST00000523359 RAD18Q9NS91 495 aa7.9□□□□□ -1.14
SKP1-211ENST00000523359 PRKAG2Q9UGJ0 569 aa7.9□□□□□ -1.14
SKP1-211ENST00000523359 SUPT16HQ9Y5B9 1047 aaKnown RBP7.9□□□□□ -1.14
SKP1-211ENST00000523359 FOSL1P15407 271 aa7.89□□□□□ -1.15
SKP1-211ENST00000523359 ZAR1Q86SH2 424 aa7.89□□□□□ -1.15
SKP1-211ENST00000523359 EZH1Q92800 747 aaPredicted RBP7.89□□□□□ -1.15
SKP1-211ENST00000523359 EAF1Q96JC9 268 aaPredicted RBP7.89□□□□□ -1.15
SKP1-211ENST00000523359 KCNQ5Q9NR82 932 aa7.89□□□□□ -1.15
SKP1-211ENST00000523359 CACNA2D2Q9NY47 1150 aa7.89□□□□□ -1.15
SKP1-211ENST00000523359 AP4E1Q9UPM8 1137 aa7.89□□□□□ -1.15
SKP1-211ENST00000523359 INPP5FQ9Y2H2 1132 aa7.89□□□□□ -1.15
SKP1-211ENST00000523359 FAM170BA6NMN3 283 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 PAX4O43316 350 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 GREM1O60565 184 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 F13A1P00488 732 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 NFICP08651 508 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 HP1BP3Q5SSJ5 553 aaPredicted RBP7.88□□□□□ -1.15
SKP1-211ENST00000523359 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.88□□□□□ -1.15
SKP1-211ENST00000523359 KRTAP1-3Q8IUG1 177 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 GATAD2BQ8WXI9 593 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 C8orf37Q96NL8 207 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 TINF2Q9BSI4 451 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 WDR18Q9BV38 432 aa7.88□□□□□ -1.15
SKP1-211ENST00000523359 TLR3O15455 904 aaKnown RBP7.87□□□□□ -1.15
SKP1-211ENST00000523359 AOC2O75106 756 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 CPSF6Q16630 551 aaKnown RBP eCLIP7.87□□□□□ -1.15
SKP1-211ENST00000523359 MSMPQ1L6U9 139 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 SCARA3Q6AZY7 606 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 FAM196AQ6ZSG2 479 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 CCDC84Q86UT8 332 aaPredicted RBP7.87□□□□□ -1.15
SKP1-211ENST00000523359 FBXO27Q8NI29 283 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 METTL22Q9BUU2 404 aaPredicted RBP7.87□□□□□ -1.15
SKP1-211ENST00000523359 SEMA6CQ9H3T2 930 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 FAM105AQ9NUU6 356 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 UBP1Q9NZI7 540 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 PCDHA4Q9UN74 947 aa7.87□□□□□ -1.15
SKP1-211ENST00000523359 ANGEL1Q9UNK9 670 aaKnown RBP7.87□□□□□ -1.15
SKP1-211ENST00000523359 FAM221AA4D161 298 aa7.86□□□□□ -1.15
SKP1-211ENST00000523359 CYP26A1O43174 497 aa7.86□□□□□ -1.15
SKP1-211ENST00000523359 CRKP46108 304 aa7.86□□□□□ -1.15
SKP1-211ENST00000523359 CDK8P49336 464 aa7.86□□□□□ -1.15
SKP1-211ENST00000523359 HNRNPUQ00839 825 aaKnown RBP eCLIP7.86□□□□□ -1.15
SKP1-211ENST00000523359 KIF4BQ2VIQ3 1234 aa7.86□□□□□ -1.15
SKP1-211ENST00000523359 LCE3BQ5TA77 95 aa7.86□□□□□ -1.15
SKP1-211ENST00000523359 GATA6Q92908 595 aa7.86□□□□□ -1.15
SKP1-211ENST00000523359 NT5C1AQ9BXI3 368 aa7.86□□□□□ -1.15
SKP1-211ENST00000523359 CILPO75339 1184 aa7.85□□□□□ -1.15
SKP1-211ENST00000523359 ASPAP45381 313 aa7.85□□□□□ -1.15
SKP1-211ENST00000523359 GJA8P48165 433 aa7.85□□□□□ -1.15
SKP1-211ENST00000523359 MAP7Q14244 749 aa7.85□□□□□ -1.15
SKP1-211ENST00000523359 GPRASP2Q96D09 838 aa7.85□□□□□ -1.15
SKP1-211ENST00000523359 ACSS3Q9H6R3 686 aa7.85□□□□□ -1.15
SKP1-211ENST00000523359 CCDC39Q9UFE4 941 aa7.85□□□□□ -1.15
SKP1-211ENST00000523359 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.84□□□□□ -1.15
SKP1-211ENST00000523359 DCDC2CA8MYV0 355 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 BPNT1O95861 308 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 SLFN14P0C7P3 912 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 GNL2Q13823 731 aaKnown RBP7.84□□□□□ -1.15
SKP1-211ENST00000523359 MPP2Q14168 576 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 INPP5AQ14642 412 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 LRFN4Q6PJG9 635 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 ABI1Q8IZP0 508 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 NKD1Q969G9 470 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 PLPPR2Q96GM1 343 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 LGR6Q9HBX8 967 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 ADGRE2Q9UHX3 823 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 DAGLAQ9Y4D2 1042 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 PCDHGC5Q9Y5F6 944 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 CSADQ9Y600 493 aa7.84□□□□□ -1.15
SKP1-211ENST00000523359 TMPRSS2O15393 492 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 RPL6Q02878 288 aaKnown RBP7.83□□□□□ -1.16
SKP1-211ENST00000523359 APOBRQ0VD83 1088 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 SEZ6Q53EL9 994 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 WIPI1Q5MNZ9 446 aaPredicted RBP7.83□□□□□ -1.16
SKP1-211ENST00000523359 DIEXFQ68CQ4 756 aaKnown RBP7.83□□□□□ -1.16
SKP1-211ENST00000523359 ZNF765Q7L2R6 523 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 RASGRP4Q8TDF6 673 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 ELMO3Q96BJ8 720 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 GOLGA2P5Q9HBQ8 144 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 LRRC4CQ9HCJ2 640 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 PPP1R9AQ9ULJ8 1098 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 ROBO2Q9HCK4 1378 aa7.83□□□□□ -1.16
SKP1-211ENST00000523359 DYNC1LI2O43237 492 aaPredicted RBP7.82□□□□□ -1.16
SKP1-211ENST00000523359 ID3Q02535 119 aa7.82□□□□□ -1.16
SKP1-211ENST00000523359 CWF19L2Q2TBE0 894 aaKnown RBP7.82□□□□□ -1.16
SKP1-211ENST00000523359 ZC3H12AQ5D1E8 599 aaKnown RBP7.82□□□□□ -1.16
SKP1-211ENST00000523359 DUSP27Q5VZP5 1158 aa7.82□□□□□ -1.16
SKP1-211ENST00000523359 REC114Q7Z4M0 266 aa7.82□□□□□ -1.16
SKP1-211ENST00000523359 C12orf40Q86WS4 652 aa7.82□□□□□ -1.16
SKP1-211ENST00000523359 SLC43A3Q8NBI5 491 aa7.82□□□□□ -1.16
SKP1-211ENST00000523359 LRRC3Q9BY71 257 aa7.82□□□□□ -1.16
SKP1-211ENST00000523359 GSX1Q9H4S2 264 aaPredicted RBP7.82□□□□□ -1.16
SKP1-211ENST00000523359 SYNGAP1Q96PV0 1343 aa7.81□□□□□ -1.16
SKP1-211ENST00000523359 DNAJA1P31689 397 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms