RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 CWC22Q9HCG8 908 aaKnown RBP8.21□□□□□ -1.1
CSMD1-211ENST00000523062 HELLSQ9NRZ9 838 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 HMG20BQ9P0W2 317 aa8.21□□□□□ -1.1
CSMD1-211ENST00000523062 COL24A1Q17RW2 1714 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 TAF1LQ8IZX4 1826 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 CDC14CA4D256 554 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 MOXD2PA6NHM9 499 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 FIGNL2A6NMB9 653 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 ZFYP08048 801 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-211ENST00000523062 UQCRFS1P1P0C7P4 283 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 SRSF11Q05519 484 aaKnown RBP8.2□□□□□ -1.1
CSMD1-211ENST00000523062 MTMR2Q13614 643 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 NECTIN1Q15223 517 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 SF3B3Q15393 1217 aaKnown RBP8.2□□□□□ -1.1
CSMD1-211ENST00000523062 ERFEQ4G0M1 354 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 MCMDC2Q4G0Z9 681 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 SLC27A3Q5K4L6 730 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 ZMYM1Q5SVZ6 1142 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 TBC1D9BQ66K14 1250 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 CREB3L3Q68CJ9 461 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 ZNF589Q86UQ0 364 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-211ENST00000523062 BEND7Q8N7W2 519 aaPredicted RBP8.2□□□□□ -1.1
CSMD1-211ENST00000523062 LPIN2Q92539 896 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 CCDC102AQ96A19 550 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 UPF3BQ9BZI7 483 aaKnown RBP8.2□□□□□ -1.1
CSMD1-211ENST00000523062 SRP68Q9UHB9 627 aaKnown RBP8.2□□□□□ -1.1
CSMD1-211ENST00000523062 NDUFB9Q9Y6M9 179 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 ARAP2Q8WZ64 1704 aa8.2□□□□□ -1.1
CSMD1-211ENST00000523062 SLC27A2O14975 620 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 RNF113AO15541 343 aaKnown RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 FRAT2O75474 233 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 TAF5LO75529 589 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 PROCP04070 461 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 FGFR2P21802 821 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 PSMA5P28066 241 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 SSFA2P28290 1259 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 GTF2E1P29083 439 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 RBM6P78332 1123 aaKnown RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 CUL4AQ13619 759 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 RAB3GAP1Q15042 981 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 AGERQ15109 404 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 TTF1Q15361 905 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 SLC10A5Q5PT55 438 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 ZNF772Q68DY9 489 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 BICDL1Q6ZP65 573 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 NBPF5PQ86XG9 351 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 ANKRD18AQ8IVF6 992 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 TMX3Q96JJ7 454 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 JAKMIP1Q96N16 626 aaKnown RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 SETDB2Q96T68 719 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 SEC31BQ9NQW1 1179 aa8.19□□□□□ -1.1
CSMD1-211ENST00000523062 RPAP1Q9BWH6 1393 aaPredicted RBP8.19□□□□□ -1.1
CSMD1-211ENST00000523062 C4AP0C0L4 1744 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-211ENST00000523062 ITGB2P05107 769 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 CELA2BP08218 269 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-211ENST00000523062 CASTP20810 708 aaKnown RBP8.18□□□□□ -1.1
CSMD1-211ENST00000523062 RFC4P35249 363 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 ZAP70P43403 619 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 NUCB2P80303 420 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.1
CSMD1-211ENST00000523062 KRT32Q14532 448 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 TRAPPC3LQ5T215 181 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 VPS53Q5VIR6 699 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 ZSCAN25Q6NSZ9 544 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 BPHLQ86WA6 291 aaPredicted RBP8.18□□□□□ -1.1
CSMD1-211ENST00000523062 INTS4Q96HW7 963 aaKnown RBP8.18□□□□□ -1.1
CSMD1-211ENST00000523062 TTC14Q96N46 770 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 DSCC1Q9BVC3 393 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.18□□□□□ -1.12e-6■■■■■ 33.4
CSMD1-211ENST00000523062 CYP46A1Q9Y6A2 500 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 MAST3O60307 1309 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 CARMIL3Q8ND23 1372 aa8.18□□□□□ -1.1
CSMD1-211ENST00000523062 MCAMP43121 646 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 PHKA1P46020 1223 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 AK2P54819 239 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 CHRNDQ07001 517 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 TSGA10IPQ3SY00 556 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 CCDC102BQ68D86 513 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 BLOC1S2Q6QNY1 142 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 TPTE2Q6XPS3 522 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 CCDC129Q6ZRS4 1044 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 SMIM5Q71RC9 77 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 HELBQ8NG08 1087 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-211ENST00000523062 APPBP2Q92624 585 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 NLRP3Q96P20 1036 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 GBP4Q96PP9 640 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 LRRC4BQ9NT99 713 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 PDRG1Q9NUG6 133 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 BSDC1Q9NW68 430 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-211ENST00000523062 MAP10Q9P2G4 905 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 LIMCH1Q9UPQ0 1083 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 BRWD3Q6RI45 1802 aa8.17□□□□□ -1.1
CSMD1-211ENST00000523062 NPHP1O15259 732 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 TRIM37O94972 964 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 PTMSP20962 102 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 MCM4P33991 863 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 ANKRD1Q15327 319 aa8.16□□□□□ -1.1
CSMD1-211ENST00000523062 WASHC4Q2M389 1173 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms