RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 NRXN1Q9ULB1 1477 aa9.37□□□□□ -0.91
PVT1-214ENST00000522875 ESRRAP11474 423 aaPredicted RBP9.37□□□□□ -0.91
PVT1-214ENST00000522875 PCDH1Q08174 1060 aa9.37□□□□□ -0.91
PVT1-214ENST00000522875 TAF1CQ15572 869 aaPredicted RBP9.37□□□□□ -0.91
PVT1-214ENST00000522875 TPTE2Q6XPS3 522 aa9.37□□□□□ -0.91
PVT1-214ENST00000522875 HIRIP3Q9BW71 556 aaPredicted RBP9.37□□□□□ -0.91
PVT1-214ENST00000522875 SEC31BQ9NQW1 1179 aa9.37□□□□□ -0.91
PVT1-214ENST00000522875 ALKQ9UM73 1620 aa9.36□□□□□ -0.91
PVT1-214ENST00000522875 H3BRJ5 948 aa9.36□□□□□ -0.91
PVT1-214ENST00000522875 SOX1O00570 391 aaPredicted RBP9.36□□□□□ -0.91
PVT1-214ENST00000522875 CABP4P57796 275 aa9.36□□□□□ -0.91
PVT1-214ENST00000522875 INSM1Q01101 510 aaPredicted RBP9.36□□□□□ -0.91
PVT1-214ENST00000522875 IKBKEQ14164 716 aa9.36□□□□□ -0.91
PVT1-214ENST00000522875 SLC7A3Q8WY07 619 aa9.36□□□□□ -0.91
PVT1-214ENST00000522875 ADAMTS8Q9UP79 889 aa9.36□□□□□ -0.91
PVT1-214ENST00000522875 CNTNAP5Q8WYK1 1306 aa9.35□□□□□ -0.91
PVT1-214ENST00000522875 NPHP4O75161 1426 aaPredicted RBP9.35□□□□□ -0.91
PVT1-214ENST00000522875 HSPA5P11021 654 aaKnown RBP9.35□□□□□ -0.91
PVT1-214ENST00000522875 TRAPPC3LQ5T215 181 aa9.35□□□□□ -0.91
PVT1-214ENST00000522875 CARD10Q9BWT7 1032 aa9.35□□□□□ -0.91
PVT1-214ENST00000522875 ZFYVE1Q9HBF4 777 aa9.35□□□□□ -0.91
PVT1-214ENST00000522875 KIAA1210Q9ULL0 1709 aa9.35□□□□□ -0.91
PVT1-214ENST00000522875 PPM1HQ9ULR3 514 aa9.35□□□□□ -0.91
PVT1-214ENST00000522875 TBX22Q9Y458 520 aa9.35□□□□□ -0.91
PVT1-214ENST00000522875 IQGAP1P46940 1657 aa9.35□□□□□ -0.91
PVT1-214ENST00000522875 POLR1AO95602 1720 aaPredicted RBP9.34□□□□□ -0.91
PVT1-214ENST00000522875 B3GALT4O96024 378 aa9.34□□□□□ -0.91
PVT1-214ENST00000522875 SETDB1Q15047 1291 aa9.34□□□□□ -0.91
PVT1-214ENST00000522875 RPS26P11Q5JNZ5 115 aaPredicted RBP9.34□□□□□ -0.91
PVT1-214ENST00000522875 PLVAPQ9BX97 442 aa9.34□□□□□ -0.91
PVT1-214ENST00000522875 GPN3Q9UHW5 284 aaPredicted RBP9.34□□□□□ -0.91
PVT1-214ENST00000522875 MKL2Q9ULH7 1088 aa9.34□□□□□ -0.91
PVT1-214ENST00000522875 USP47Q96K76 1375 aa9.34□□□□□ -0.91
PVT1-214ENST00000522875 LAMC1P11047 1609 aa9.34□□□□□ -0.91
PVT1-214ENST00000522875 SETBP1Q9Y6X0 1596 aa9.33□□□□□ -0.92
PVT1-214ENST00000522875 ADAMTS13Q76LX8 1427 aa9.33□□□□□ -0.92
PVT1-214ENST00000522875 ENC1O14682 589 aa9.33□□□□□ -0.92
PVT1-214ENST00000522875 FSCN2O14926 492 aa9.33□□□□□ -0.92
PVT1-214ENST00000522875 DEAF1O75398 565 aaPredicted RBP9.33□□□□□ -0.92
PVT1-214ENST00000522875 ST13P50502 369 aaKnown RBP9.33□□□□□ -0.92
PVT1-214ENST00000522875 GALNT11Q8NCW6 608 aa9.33□□□□□ -0.92
PVT1-214ENST00000522875 NECAB3Q96P71 396 aaPredicted RBP9.33□□□□□ -0.92
PVT1-214ENST00000522875 TRIM56Q9BRZ2 755 aaKnown RBP9.33□□□□□ -0.92
PVT1-214ENST00000522875 POGKQ9P215 609 aa9.33□□□□□ -0.92
PVT1-214ENST00000522875 NRXN3Q9Y4C0 1643 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 ST20-MTHFSA0A0A6YYL1 179 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 FAM229AH3BQW9 127 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 GNB5O14775 395 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 SCAMP3O14828 347 aaKnown RBP9.32□□□□□ -0.92
PVT1-214ENST00000522875 TM4SF5O14894 197 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 PAGE1O75459 146 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 CELA3AP09093 270 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 FANCCQ00597 558 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 SAFB2Q14151 953 aaKnown RBP eCLIP9.32□□□□□ -0.92
PVT1-214ENST00000522875 CCDC85BQ15834 202 aaPredicted RBP9.32□□□□□ -0.92
PVT1-214ENST00000522875 C9orf131Q5VYM1 1079 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 ANKRD24Q8TF21 1146 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 POLR3GLQ9BT43 218 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 IGSF5Q9NSI5 407 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 METP08581 1390 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 GPRASP1Q5JY77 1395 aa9.32□□□□□ -0.92
PVT1-214ENST00000522875 YTHDC2Q9H6S0 1430 aaKnown RBP9.31□□□□□ -0.92
PVT1-214ENST00000522875 A0A0A0MRY4 1105 aa9.31□□□□□ -0.92
PVT1-214ENST00000522875 PIP4K2BP78356 416 aa9.31□□□□□ -0.92
PVT1-214ENST00000522875 HDLBPQ00341 1268 aaKnown RBP9.31□□□□□ -0.92
PVT1-214ENST00000522875 FAM117BQ6P1L5 589 aa9.31□□□□□ -0.92
PVT1-214ENST00000522875 KLHDC7BQ96G42 594 aa9.31□□□□□ -0.92
PVT1-214ENST00000522875 TMEM39AQ9NV64 488 aa9.31□□□□□ -0.92
PVT1-214ENST00000522875 LRPPRCP42704 1394 aaKnown RBP9.31□□□□□ -0.92
PVT1-214ENST00000522875 ASXL1Q8IXJ9 1541 aa9.31□□□□□ -0.92
PVT1-214ENST00000522875 ADGRB1O14514 1584 aa9.3□□□□□ -0.92
PVT1-214ENST00000522875 MED14O60244 1454 aa9.3□□□□□ -0.92
PVT1-214ENST00000522875 EIF3AQ14152 1382 aaKnown RBP9.3□□□□□ -0.92
PVT1-214ENST00000522875 TCF3P15923 654 aa9.3□□□□□ -0.92
PVT1-214ENST00000522875 ZNF76P36508 570 aa9.3□□□□□ -0.92
PVT1-214ENST00000522875 C19orf57Q0VDD7 668 aa9.3□□□□□ -0.92
PVT1-214ENST00000522875 CEP44Q9C0F1 390 aa9.3□□□□□ -0.92
PVT1-214ENST00000522875 SETD1AO15047 1707 aaKnown RBP9.3□□□□□ -0.92
PVT1-214ENST00000522875 DIP2AQ14689 1571 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 F6X3S4 739 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 GSTM4Q03013 218 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 MAP3K11Q16584 847 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 SV2BQ7L1I2 683 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 WAPLQ7Z5K2 1190 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 PODNQ7Z5L7 613 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 FMR1NBQ8N0W7 255 aaPredicted RBP9.29□□□□□ -0.92
PVT1-214ENST00000522875 BEND7Q8N7W2 519 aaPredicted RBP9.29□□□□□ -0.92
PVT1-214ENST00000522875 STK35Q8TDR2 534 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 PRAM1Q96QH2 718 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 METTL5Q9NRN9 209 aaKnown RBP9.29□□□□□ -0.92
PVT1-214ENST00000522875 PTPRUQ92729 1446 aa9.29□□□□□ -0.92
PVT1-214ENST00000522875 CENPJQ9HC77 1338 aaPredicted RBP9.29□□□□□ -0.92
PVT1-214ENST00000522875 ABCC11Q96J66 1382 aa9.28□□□□□ -0.92
PVT1-214ENST00000522875 PIK3R4Q99570 1358 aa9.28□□□□□ -0.92
PVT1-214ENST00000522875 DDX3YO15523 660 aaKnown RBP9.28□□□□□ -0.92
PVT1-214ENST00000522875 KCNA6P17658 529 aa9.28□□□□□ -0.92
PVT1-214ENST00000522875 ARL4DP49703 201 aa9.28□□□□□ -0.92
PVT1-214ENST00000522875 METTL16Q86W50 562 aaKnown RBP9.28□□□□□ -0.92
PVT1-214ENST00000522875 DTWD1Q8N5C7 304 aa9.28□□□□□ -0.92
PVT1-214ENST00000522875 FBXO41Q8TF61 875 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms