RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 NOL8Q76FK4 1167 aaKnown RBP14.67□□□□□ -0.06
PABPC1-219ENST00000522387 AMOTL1Q8IY63 956 aa14.67□□□□□ -0.06
PABPC1-219ENST00000522387 MYH1P12882 1939 aa14.67□□□□□ -0.06
PABPC1-219ENST00000522387 NEDD4P46934 1319 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 B4E1Z4 1266 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 IGSF3O75054 1194 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 VEGFAP15692 232 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-219ENST00000522387 CERS3Q8IU89 383 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 CRACR2BQ8N4Y2 399 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-219ENST00000522387 CHMP4CQ96CF2 233 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 KIF2CQ99661 725 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 ZKSCAN3Q9BRR0 538 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 ARPP21Q9UBL0 812 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-219ENST00000522387 SHROOM1Q2M3G4 852 aaPredicted RBP14.66□□□□□ -0.06
PABPC1-219ENST00000522387 FAM47AQ5JRC9 791 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 DCPSQ96C86 337 aaKnown RBP14.66□□□□□ -0.06
PABPC1-219ENST00000522387 NAV1Q8NEY1 1877 aa14.66□□□□□ -0.06
PABPC1-219ENST00000522387 RANBP6O60518 1105 aaKnown RBP14.65□□□□□ -0.06
PABPC1-219ENST00000522387 RBM25P49756 843 aaKnown RBP14.65□□□□□ -0.06
PABPC1-219ENST00000522387 ALX1Q15699 326 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 NBPF12Q5TAG4 269 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-219ENST00000522387 MFSD6Q6ZSS7 791 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 KRT26Q7Z3Y9 468 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 GLIS2Q9BZE0 524 aaPredicted RBP14.65□□□□□ -0.06
PABPC1-219ENST00000522387 GIMAP6Q6P9H5 292 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 USP48Q86UV5 1035 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 SULF1Q8IWU6 871 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 TBC1D2Q9BYX2 928 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 MKNK2Q9HBH9 465 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 SERPINB13Q9UIV8 391 aa14.65□□□□□ -0.06
PABPC1-219ENST00000522387 KDM4AO75164 1064 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 HLA-DOAP06340 250 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 AKNAD1Q5T1N1 836 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 USP50Q70EL3 339 aaPredicted RBP14.64□□□□□ -0.07
PABPC1-219ENST00000522387 FAM151AQ8WW52 585 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 ZNF408Q9H9D4 720 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 GPBP1L1Q9HC44 474 aaPredicted RBP14.64□□□□□ -0.07
PABPC1-219ENST00000522387 NMT2O60551 498 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 TNNI2P48788 182 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 NEK4P51957 841 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 TNFAIP1Q13829 316 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 BECN1Q14457 450 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 TTC6Q86TZ1 520 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 NEK1Q96PY6 1258 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 TRIM34Q9BYJ4 488 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 DNAJC18Q9H819 358 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.64□□□□□ -0.07
PABPC1-219ENST00000522387 PI4KBQ9UBF8 816 aa14.64□□□□□ -0.07
PABPC1-219ENST00000522387 TRAF5O00463 557 aa14.63□□□□□ -0.07
PABPC1-219ENST00000522387 ENTPD3O75355 529 aa14.63□□□□□ -0.07
PABPC1-219ENST00000522387 TRDNQ13061 729 aa14.63□□□□□ -0.07
PABPC1-219ENST00000522387 RPAP1Q9BWH6 1393 aaPredicted RBP14.63□□□□□ -0.07
PABPC1-219ENST00000522387 FOCADQ5VW36 1801 aa14.63□□□□□ -0.07
PABPC1-219ENST00000522387 EIF5BO60841 1220 aaKnown RBP14.63□□□□□ -0.07
PABPC1-219ENST00000522387 CDK8P49336 464 aa14.63□□□□□ -0.07
PABPC1-219ENST00000522387 SBK1Q52WX2 424 aa14.63□□□□□ -0.07
PABPC1-219ENST00000522387 RALYLQ86SE5 291 aaKnown RBP14.63□□□□□ -0.07
PABPC1-219ENST00000522387 PNMA8AQ86V59 439 aaPredicted RBP14.63□□□□□ -0.07
PABPC1-219ENST00000522387 TEPSINQ96N21 525 aa14.63□□□□□ -0.07
PABPC1-219ENST00000522387 GPHNQ9NQX3 736 aaPredicted RBP14.63□□□□□ -0.07
PABPC1-219ENST00000522387 MPHOSPH10O00566 681 aaKnown RBP14.62□□□□□ -0.07
PABPC1-219ENST00000522387 GDF11O95390 407 aa14.62□□□□□ -0.07
PABPC1-219ENST00000522387 MMP14P50281 582 aa14.62□□□□□ -0.07
PABPC1-219ENST00000522387 PDE4BQ07343 736 aa14.62□□□□□ -0.07
PABPC1-219ENST00000522387 CYB5R4Q7L1T6 521 aa14.62□□□□□ -0.07
PABPC1-219ENST00000522387 CLEC10AQ8IUN9 316 aa14.62□□□□□ -0.07
PABPC1-219ENST00000522387 DHX36Q9H2U1 1008 aaKnown RBP14.62□□□□□ -0.07
PABPC1-219ENST00000522387 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.62□□□□□ -0.07
PABPC1-219ENST00000522387 ZSWIM5Q9P217 1185 aa14.62□□□□□ -0.07
PABPC1-219ENST00000522387 DTNBO60941 627 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 FAM83AQ86UY5 434 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 APOBEC3FQ8IUX4 373 aaKnown RBP14.61□□□□□ -0.07
PABPC1-219ENST00000522387 SCN4AP35499 1836 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 ZMYM6O95789 1325 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 TSPY2A6NKD2 308 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 CD2BP2O95400 341 aaKnown RBP14.61□□□□□ -0.07
PABPC1-219ENST00000522387 SLC3A2P08195 630 aaKnown RBP14.61□□□□□ -0.07
PABPC1-219ENST00000522387 YY1P25490 414 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 BLOC1S2Q6QNY1 142 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 NCOA7Q8NI08 942 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 MTMR7Q9Y216 660 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 WDR90Q96KV7 1748 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 CENPFP49454 3210 aa14.61□□□□□ -0.07
PABPC1-219ENST00000522387 FGD1P98174 961 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 TFAP4Q01664 338 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 RRP1BQ14684 758 aaKnown RBP14.6□□□□□ -0.07
PABPC1-219ENST00000522387 MOB2Q70IA6 237 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 ZNF444Q8N0Y2 327 aaPredicted RBP14.6□□□□□ -0.07
PABPC1-219ENST00000522387 STAG1Q8WVM7 1258 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 ANAPC4Q9UJX5 808 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 SHMT1P34896 483 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 FKBP1CQ5VVH2 108 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 C16orf86Q6ZW13 317 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 CCDC84Q86UT8 332 aaPredicted RBP14.6□□□□□ -0.07
PABPC1-219ENST00000522387 RAB11FIP4Q86YS3 637 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 NAP1L2Q9ULW6 460 aaPredicted RBP14.6□□□□□ -0.07
PABPC1-219ENST00000522387 CYP46A1Q9Y6A2 500 aa14.6□□□□□ -0.07
PABPC1-219ENST00000522387 TSPY3P0CV98 308 aa14.59□□□□□ -0.07
PABPC1-219ENST00000522387 TSPY8P0CW00 308 aa14.59□□□□□ -0.07
PABPC1-219ENST00000522387 GABPAQ06546 454 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms