RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 MIR1-1HGQ9H1L0 117 aa9.65□□□□□ -0.86
SPIDR-215ENST00000521798 ST7Q9NRC1 585 aa9.65□□□□□ -0.86
SPIDR-215ENST00000521798 ZNRF3Q9ULT6 936 aa9.65□□□□□ -0.86
SPIDR-215ENST00000521798 IQSEC2Q5JU85 1478 aa9.65□□□□□ -0.87
SPIDR-215ENST00000521798 NRXN3Q9Y4C0 1643 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 RPGRIP1LQ68CZ1 1315 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 SETBP1Q9Y6X0 1596 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 NFKBIEO00221 500 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 TRPA1O75762 1119 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 MAP3K6O95382 1288 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 MCM4P33991 863 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 CCDC181Q5TID7 509 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 MRPL14Q6P1L8 145 aaKnown RBP9.64□□□□□ -0.87
SPIDR-215ENST00000521798 FIGNL1Q6PIW4 674 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 REXO1Q8N1G1 1221 aaKnown RBP9.64□□□□□ -0.87
SPIDR-215ENST00000521798 FBXO41Q8TF61 875 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 PLD4Q96BZ4 506 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 HHIPQ96QV1 700 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
SPIDR-215ENST00000521798 GPN3Q9UHW5 284 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-215ENST00000521798 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.64□□□□□ -0.87
SPIDR-215ENST00000521798 LRRC7Q96NW7 1537 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 ATXN7O15265 892 aaPredicted RBP9.63□□□□□ -0.87
SPIDR-215ENST00000521798 TRIM37O94972 964 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 KCNA6P17658 529 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 LMNB1P20700 586 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 GYS2P54840 703 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 AMPD3Q01432 767 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 SQSTM1Q13501 440 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 LAMC2Q13753 1193 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 PLEKHG6Q3KR16 790 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 RGL3Q3MIN7 710 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 TAF7LQ5H9L4 462 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 FBXW10Q5XX13 1052 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 C16orf86Q6ZW13 317 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 NXPE3Q969Y0 559 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 FEZ1Q99689 392 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 PCDHB5Q9Y5E4 795 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 DIP2AQ14689 1571 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 NWD1Q149M9 1564 aa9.63□□□□□ -0.87
SPIDR-215ENST00000521798 SOS2Q07890 1332 aaPredicted RBP9.62□□□□□ -0.87
SPIDR-215ENST00000521798 CILPO75339 1184 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 PARNO95453 639 aaKnown RBP9.62□□□□□ -0.87
SPIDR-215ENST00000521798 IMPDH2P12268 514 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 FXNQ16595 210 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 C2orf27AQ580R0 203 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 REC114Q7Z4M0 266 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 RBBP8NLQ8NC74 664 aaPredicted RBP9.62□□□□□ -0.87
SPIDR-215ENST00000521798 IRF2BPLQ9H1B7 796 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 TMEM39AQ9NV64 488 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 DDX56Q9NY93 547 aaKnown RBP9.62□□□□□ -0.87
SPIDR-215ENST00000521798 SAMM50Q9Y512 469 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 PPME1Q9Y570 386 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 PCDHGC4Q9Y5F7 938 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 PPLO60437 1756 aa9.62□□□□□ -0.87
SPIDR-215ENST00000521798 PRR20EP86478 221 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 PRR20CP86479 221 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 PRR20DP86480 221 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 PRR20BP86481 221 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 PRR20AP86496 221 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 LSRQ86X29 649 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-215ENST00000521798 JMYQ8N9B5 988 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 GAS2L1Q99501 681 aaPredicted RBP9.61□□□□□ -0.87
SPIDR-215ENST00000521798 BRMS1Q9HCU9 246 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 PTPRUQ92729 1446 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 METP08581 1390 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 PIK3R4Q99570 1358 aa9.61□□□□□ -0.87
SPIDR-215ENST00000521798 ADGRF5Q8IZF2 1346 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 DCDC2BA2VCK2 349 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 FIGNL2A6NMB9 653 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 PDE2AO00408 941 aaPredicted RBP9.6□□□□□ -0.87
SPIDR-215ENST00000521798 KHNYNO15037 678 aaKnown RBP9.6□□□□□ -0.87
SPIDR-215ENST00000521798 CASP7P55210 303 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 PPP2R3AQ06190 1150 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 RASIP1Q5U651 963 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 LARP1BQ659C4 914 aaKnown RBP9.6□□□□□ -0.87
SPIDR-215ENST00000521798 DIEXFQ68CQ4 756 aaKnown RBP9.6□□□□□ -0.87
SPIDR-215ENST00000521798 KANK3Q6NY19 840 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 DHX32Q7L7V1 743 aaKnown RBP9.6□□□□□ -0.87
SPIDR-215ENST00000521798 ASAP3Q8TDY4 903 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 THAP3Q8WTV1 239 aaPredicted RBP9.6□□□□□ -0.87
SPIDR-215ENST00000521798 STAG1Q8WVM7 1258 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 JARID2Q92833 1246 aaPredicted RBP9.6□□□□□ -0.87
SPIDR-215ENST00000521798 NSUN5Q96P11 429 aaKnown RBP9.6□□□□□ -0.87
SPIDR-215ENST00000521798 TNKS2Q9H2K2 1166 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 CYP8B1Q9UNU6 501 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 LEMD3Q9Y2U8 911 aa9.6□□□□□ -0.87
SPIDR-215ENST00000521798 NKTRP30414 1462 aaKnown RBP9.59□□□□□ -0.87
SPIDR-215ENST00000521798 IFT172Q9UG01 1749 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
SPIDR-215ENST00000521798 BMP6P22004 513 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 NRLP54845 237 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 CLCQ05315 142 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 TNP2Q05952 138 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 SPEM2Q0P670 501 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 SEPT6Q14141 434 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 MTERF2Q49AM1 385 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 GK5Q6ZS86 529 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 STRN4Q9NRL3 753 aa9.59□□□□□ -0.87
SPIDR-215ENST00000521798 TMEM94Q12767 1356 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms