RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 TMEM57Q8N5G2 664 aa10.94□□□□□ -0.66
CTNNA1-229ENST00000521683 SSH3Q8TE77 659 aa10.94□□□□□ -0.66
CTNNA1-229ENST00000521683 SMCR8Q8TEV9 937 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-229ENST00000521683 CLUAP1Q96AJ1 413 aa10.94□□□□□ -0.66
CTNNA1-229ENST00000521683 HERC5Q9UII4 1024 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-229ENST00000521683 PNMA3Q9UL41 463 aa10.94□□□□□ -0.66
CTNNA1-229ENST00000521683 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 CCL5P13501 91 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 PLCG2P16885 1265 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 CAPN2P17655 700 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 HOXD11P31277 338 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 IRF5Q13568 498 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 FAM110CQ1W6H9 321 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 TNNI3KQ59H18 835 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 UBE2Q1Q7Z7E8 422 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 PXYLP1Q8TE99 480 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 ZNF512BQ96KM6 892 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 NOL10Q9BSC4 688 aaKnown RBP10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 LRP2BPQ9P2M1 347 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 GABRQQ9UN88 632 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 FPGT-TNNI3KV9GXZ4 949 aa10.93□□□□□ -0.66
CTNNA1-229ENST00000521683 FAM196BA6NMK8 535 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 ADCY3O60266 1144 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 BAG3O95817 575 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 CAP2P40123 477 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 PPP4CP60510 307 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 ATP8B2P98198 1209 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 SH3D19Q5HYK7 790 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 CCDC158Q5M9N0 1113 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 TTC39AQ5SRH9 613 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 TREML2Q5T2D2 321 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 NAA16Q6N069 864 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 CCDC84Q86UT8 332 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 ZNF280CQ8ND82 737 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 RNF208Q9H0X6 261 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 DHX36Q9H2U1 1008 aaKnown RBP10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 BIN2Q9UBW5 565 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 SIPA1L1O43166 1804 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 ATAD5Q96QE3 1844 aa10.92□□□□□ -0.66
CTNNA1-229ENST00000521683 FOCADQ5VW36 1801 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 RANBP2P49792 3224 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 USP17L5A8MUK1 530 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 TNPO2O14787 897 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 GCLCP48506 637 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 FLT3LGP49771 235 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 SPP2Q13103 211 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 OS9Q13438 667 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 METTL16Q86W50 562 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 SH3RF3Q8TEJ3 882 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 COA7Q96BR5 231 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 DBNDD2Q9BQY9 259 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 HTATIP2Q9BUP3 242 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 AS3MTQ9HBK9 375 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 GINM1Q9NU53 330 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 PI4KBQ9UBF8 816 aa10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 NOP58Q9Y2X3 529 aaKnown RBP10.91□□□□□ -0.66
CTNNA1-229ENST00000521683 FLT1P17948 1338 aa10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 H0YGN5 161 aa10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 CYP2E1P05181 493 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 ASNSP08243 561 aa10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 FXR1P51114 621 aaKnown RBP eCLIP10.9□□□□□ -0.668e-6■■■□□ 16.4
CTNNA1-229ENST00000521683 HMGCS2P54868 508 aa10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 RRP1BQ14684 758 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 FTSJ3Q8IY81 847 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 ANKRD13CQ8N6S4 541 aa10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 U2AF1L4Q8WU68 220 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 WDR18Q9BV38 432 aa10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 UNC93B1Q9H1C4 597 aa10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 SNRKQ9NRH2 765 aa10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 AATFQ9NY61 560 aaKnown RBP eCLIP10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 COLQQ9Y215 455 aaPredicted RBP10.9□□□□□ -0.66
CTNNA1-229ENST00000521683 CDK5RAP2Q96SN8 1893 aa10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 DOCK3Q8IZD9 2030 aa10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 SURF6O75683 361 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 FARP2O94887 1054 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 SGPL1O95470 568 aa10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 INHAP05111 366 aa10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 TMED8Q6PL24 325 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 CERS3Q8IU89 383 aa10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 FOXP4Q8IVH2 680 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 ASCC2Q9H1I8 757 aaPredicted RBP10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 DNAJC18Q9H819 358 aa10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 MORF4L1Q9UBU8 362 aa10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 DBNLQ9UJU6 430 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-229ENST00000521683 ZBTB7BO15156 539 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 HLA-DOAP06340 250 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 ELNP15502 786 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 HOXA7P31268 230 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 ZAP70P43403 619 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 BACE1P56817 501 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 ADGRA1Q86SQ6 560 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 TGFBRAP1Q8WUH2 860 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 TRIM34Q9BYJ4 488 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 C1orf115Q9H7X2 142 aa10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 PAK6Q9NQU5 681 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-229ENST00000521683 MYO5AQ9Y4I1 1855 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms