RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 LRRC69Q6ZNQ3 347 aa7.54□□□□□ -1.2
FAM49B-218ENST00000520887 C7orf43Q8WVR3 580 aa7.54□□□□□ -1.2
FAM49B-218ENST00000520887 TSR2Q969E8 191 aaKnown RBP7.54□□□□□ -1.2
FAM49B-218ENST00000520887 KLF15Q9UIH9 416 aa7.54□□□□□ -1.2
FAM49B-218ENST00000520887 RBM19Q9Y4C8 960 aaKnown RBP7.54□□□□□ -1.2
FAM49B-218ENST00000520887 TUBGCP6Q96RT7 1819 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 M0R2N6 131 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 PIK3R2O00459 728 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 ELL2O00472 640 aaPredicted RBP7.53□□□□□ -1.2
FAM49B-218ENST00000520887 EFSO43281 561 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 ZBTB7AO95365 584 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 ZNF853P0CG23 659 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 PSMA6P60900 246 aaKnown RBP7.53□□□□□ -1.2
FAM49B-218ENST00000520887 LINC00114Q6XXX2 140 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 ALYREFQ86V81 257 aaKnown RBP7.53□□□□□ -1.2
FAM49B-218ENST00000520887 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
FAM49B-218ENST00000520887 DDX21Q9NR30 783 aaKnown RBP eCLIP7.53□□□□□ -1.2
FAM49B-218ENST00000520887 NARFQ9UHQ1 456 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 CHMP3Q9Y3E7 222 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 USP16Q9Y5T5 823 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 GPC6Q9Y625 555 aaPredicted RBP7.53□□□□□ -1.2
FAM49B-218ENST00000520887 EP400Q96L91 3159 aa7.53□□□□□ -1.2
FAM49B-218ENST00000520887 KIF16BQ96L93 1317 aa7.52□□□□□ -1.2
FAM49B-218ENST00000520887 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.2
FAM49B-218ENST00000520887 C4AP0C0L4 1744 aa7.52□□□□□ -1.2
FAM49B-218ENST00000520887 SCN7AQ01118 1682 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 A1BGP04217 495 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 ITGB2P05107 769 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 COL8A1P27658 744 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 PCBP4P57723 403 aaKnown RBP7.52□□□□□ -1.21
FAM49B-218ENST00000520887 ST5P78524 1137 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 EXOSC9Q06265 439 aaKnown RBP7.52□□□□□ -1.21
FAM49B-218ENST00000520887 AIMP1Q12904 312 aaKnown RBP7.52□□□□□ -1.21
FAM49B-218ENST00000520887 SH3PXD2AQ5TCZ1 1133 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 ZNF468Q5VIY5 522 aaPredicted RBP7.52□□□□□ -1.21
FAM49B-218ENST00000520887 CLEC4GQ6UXB4 293 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 FCHSD1Q86WN1 690 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 COL23A1Q86Y22 540 aaPredicted RBP7.52□□□□□ -1.21
FAM49B-218ENST00000520887 SIX5Q8N196 739 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 ZNF594Q96JF6 807 aaPredicted RBP7.52□□□□□ -1.21
FAM49B-218ENST00000520887 YTHDC1Q96MU7 727 aaKnown RBP7.52□□□□□ -1.21
FAM49B-218ENST00000520887 SETDB2Q96T68 719 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 SPOCK3Q9BQ16 436 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 PPP1R12CQ9BZL4 782 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 NYXQ9GZU5 481 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 TFIP11Q9UBB9 837 aaKnown RBP7.52□□□□□ -1.21
FAM49B-218ENST00000520887 LRP5O75197 1615 aa7.52□□□□□ -1.21
FAM49B-218ENST00000520887 CACNA1FO60840 1977 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 CASZ1Q86V15 1759 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 CARMIL3Q8ND23 1372 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 SFI1A8K8P3 1242 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 ERVV-1B6SEH8 477 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 GNB5O14775 395 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 EIF5P55010 431 aaKnown RBP7.51□□□□□ -1.21
FAM49B-218ENST00000520887 FKBP5Q13451 457 aaPredicted RBP7.51□□□□□ -1.21
FAM49B-218ENST00000520887 PARP10Q53GL7 1025 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 USPL1Q5W0Q7 1092 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 MSL1Q68DK7 614 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 INTS5Q6P9B9 1019 aaKnown RBP7.51□□□□□ -1.21
FAM49B-218ENST00000520887 CHSY3Q70JA7 882 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 PPP1R42Q7Z4L9 355 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.51□□□□□ -1.21
FAM49B-218ENST00000520887 TSEN2Q8NCE0 465 aaKnown RBP7.51□□□□□ -1.21
FAM49B-218ENST00000520887 RHPN1Q8TCX5 695 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 SMC4Q9NTJ3 1288 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 CHPF2Q9P2E5 772 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 HCN4Q9Y3Q4 1203 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 BCORQ6W2J9 1755 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 MAP3K15Q6ZN16 1313 aa7.51□□□□□ -1.21
FAM49B-218ENST00000520887 KRBA1A5PL33 1030 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 IPO8O15397 1037 aaKnown RBP7.5□□□□□ -1.21
FAM49B-218ENST00000520887 RASA1P20936 1047 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 DGKGP49619 791 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 SLFN5Q08AF3 891 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 GRIN2CQ14957 1233 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 ALDH1L2Q3SY69 923 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 C1orf53Q5VUE5 145 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 NBPF5PQ86XG9 351 aaPredicted RBP7.5□□□□□ -1.21
FAM49B-218ENST00000520887 PLBD2Q8NHP8 589 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 TMX4Q9H1E5 349 aaPredicted RBP7.5□□□□□ -1.21
FAM49B-218ENST00000520887 SUV39H2Q9H5I1 410 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 NIP7Q9Y221 180 aaKnown RBP eCLIP7.5□□□□□ -1.21
FAM49B-218ENST00000520887 RNF123Q5XPI4 1314 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 ZNF521Q96K83 1311 aa7.5□□□□□ -1.21
FAM49B-218ENST00000520887 MYH14Q7Z406 1995 aaKnown RBP7.5□□□□□ -1.21
FAM49B-218ENST00000520887 PRAMEF22A3QJZ6 481 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 PPP1R12BO60237 982 aaPredicted RBP7.49□□□□□ -1.21
FAM49B-218ENST00000520887 DKK1O94907 266 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 MMP10P09238 476 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 GYS1P13807 737 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 PIP4K2AP48426 406 aaPredicted RBP7.49□□□□□ -1.21
FAM49B-218ENST00000520887 HIRAP54198 1017 aaPredicted RBP7.49□□□□□ -1.21
FAM49B-218ENST00000520887 TPTE2Q6XPS3 522 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 COPS6Q7L5N1 327 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 CNBD1Q8NA66 436 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 C8orf58Q8NAV2 365 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 XAGE3Q8WTP9 111 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 PHACTR1Q9C0D0 580 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 ANKIB1Q9P2G1 1089 aa7.49□□□□□ -1.21
FAM49B-218ENST00000520887 HDAC5Q9UQL6 1122 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms