RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 GCFC2P16383 781 aaKnown RBP10.01□□□□□ -0.81
SHPRH-208ENST00000520752 NUCB1Q02818 461 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 DDR1Q08345 913 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 ELF2Q15723 593 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 PDCD2Q16342 344 aaPredicted RBP10.01□□□□□ -0.81
SHPRH-208ENST00000520752 XKR5Q6UX68 686 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 BORCS6Q96GS4 357 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 INTS4Q96HW7 963 aaKnown RBP10.01□□□□□ -0.81
SHPRH-208ENST00000520752 ASB16Q96NS5 453 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 FAM129BQ96TA1 746 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 GSX2Q9BZM3 304 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 GGNBP2Q9H3C7 697 aa10.01□□□□□ -0.81
SHPRH-208ENST00000520752 CLTCL1P53675 1640 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 CCP110O43303 1012 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 XYLBO75191 536 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 CDC45O75419 566 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 CD33P20138 364 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 OAS2P29728 719 aaKnown RBP10□□□□□ -0.81
SHPRH-208ENST00000520752 KCNJ6P48051 423 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 CTBSQ01459 385 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 EHHADHQ08426 723 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 CCINQ13939 588 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 GAS6Q14393 721 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 TRIP4Q15650 581 aaPredicted RBP10□□□□□ -0.81
SHPRH-208ENST00000520752 CCDC158Q5M9N0 1113 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 WWC2Q6AWC2 1192 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 DNAJC14Q6Y2X3 702 aaPredicted RBP10□□□□□ -0.81
SHPRH-208ENST00000520752 GBP6Q6ZN66 633 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 IRF7Q92985 503 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 GTF3C6Q969F1 213 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 ZNF428Q96B54 188 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 C16orf45Q96MC5 204 aaPredicted RBP10□□□□□ -0.81
SHPRH-208ENST00000520752 FUCA2Q9BTY2 467 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 VEZTQ9HBM0 779 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 ST7Q9NRC1 585 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 ZDHHC9Q9Y397 364 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 SPAG9O60271 1321 aaKnown RBP10□□□□□ -0.81
SHPRH-208ENST00000520752 AATKQ6ZMQ8 1374 aa10□□□□□ -0.81
SHPRH-208ENST00000520752 ERCC6Q03468 1493 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 PLEKHD1A6NEE1 506 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 UBAP1LF5GYI3 381 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 PES1O00541 588 aaKnown RBP9.99□□□□□ -0.81
SHPRH-208ENST00000520752 IGHA2P01877 340 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 ELF1P32519 619 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 RARSP54136 660 aaKnown RBP9.99□□□□□ -0.81
SHPRH-208ENST00000520752 TUBB4BP68371 445 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 GRIK3Q13003 919 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 SMC1AQ14683 1233 aaKnown RBP9.99□□□□□ -0.81
SHPRH-208ENST00000520752 CCDC96Q2M329 555 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 PDE12Q6L8Q7 609 aaKnown RBP9.99□□□□□ -0.81
SHPRH-208ENST00000520752 ANKRD18AQ8IVF6 992 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 ZSCAN29Q8IWY8 852 aaPredicted RBP9.99□□□□□ -0.81
SHPRH-208ENST00000520752 REXO1L1PQ8IX06 675 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 KLHL23Q8NBE8 558 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 TTC16Q8NEE8 873 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 TCP11Q8WWU5 503 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 FAXDC2Q96IV6 333 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 DDX19BQ9UMR2 479 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 KDM6BO15054 1643 aa9.99□□□□□ -0.81
SHPRH-208ENST00000520752 PPFIA4O75335 1185 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 CCDC192P0DO97 292 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 MX2P20592 715 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 PRPHP41219 470 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 MNAT1P51948 309 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 MRPL12P52815 198 aaKnown RBP9.98□□□□□ -0.81
SHPRH-208ENST00000520752 UBE2HP62256 183 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 ST5P78524 1137 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 SPEM2Q0P670 501 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 RBBP5Q15291 538 aaKnown RBP9.98□□□□□ -0.81
SHPRH-208ENST00000520752 ZSCAN25Q6NSZ9 544 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 WDR63Q8IWG1 891 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
SHPRH-208ENST00000520752 DMRTB1Q96MA1 342 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 PRDM16Q9HAZ2 1276 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 ADAM21Q9UKJ8 722 aa9.98□□□□□ -0.81
SHPRH-208ENST00000520752 ST20-MTHFSA0A0A6YYL1 179 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 C2CD2LO14523 706 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 POLR3GO15318 223 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-208ENST00000520752 PTGS1P23219 599 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 PPP2R1AP30153 589 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 MAGEA8P43361 318 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 GRIN2CQ14957 1233 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 CCDC93Q567U6 631 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 ZKSCAN2Q63HK3 967 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 TSHZ1Q6ZSZ6 1077 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 TMC7Q7Z402 723 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 MICALL1Q8N3F8 863 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 GCC1Q96CN9 775 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 SLC30A3Q99726 388 aa9.97□□□□□ -0.81
SHPRH-208ENST00000520752 THUMPD2Q9BTF0 503 aaKnown RBP9.97□□□□□ -0.81
SHPRH-208ENST00000520752 TRIM6Q9C030 488 aaPredicted RBP9.97□□□□□ -0.81
SHPRH-208ENST00000520752 SPATS2LQ9NUQ6 558 aaKnown RBP9.97□□□□□ -0.81
SHPRH-208ENST00000520752 ATXN2Q99700 1313 aaKnown RBP9.97□□□□□ -0.81
SHPRH-208ENST00000520752 WDR33Q9C0J8 1336 aaKnown RBP9.97□□□□□ -0.81
SHPRH-208ENST00000520752 A0A1B0GUA9 196 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 IPO8O15397 1037 aaKnown RBP9.96□□□□□ -0.82
SHPRH-208ENST00000520752 ERLIN2O94905 339 aa9.96□□□□□ -0.82
SHPRH-208ENST00000520752 HCLS1P14317 486 aaPredicted RBP9.96□□□□□ -0.82
SHPRH-208ENST00000520752 RDXP35241 583 aaKnown RBP9.96□□□□□ -0.82
SHPRH-208ENST00000520752 LMAN1P49257 510 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms