RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 CCDC82Q8N4S0 544 aa29.8■■■□□ 2.36
COL13A1-213ENST00000520267 NUP133Q8WUM0 1156 aa29.8■■■□□ 2.36
COL13A1-213ENST00000520267 WASF1Q92558 559 aa29.8■■■□□ 2.36
COL13A1-213ENST00000520267 TPM3P06753 285 aa29.8■■■□□ 2.36
COL13A1-213ENST00000520267 FANCBQ8NB91 859 aa29.8■■■□□ 2.36
COL13A1-213ENST00000520267 ZNF202O95125 648 aa29.79■■■□□ 2.36
COL13A1-213ENST00000520267 PFKFB1P16118 471 aa29.79■■■□□ 2.36
COL13A1-213ENST00000520267 CRACR2BQ8N4Y2 399 aaPredicted RBP29.79■■■□□ 2.36
COL13A1-213ENST00000520267 GOLGA6L19H0YKK7 550 aa29.79■■■□□ 2.36
COL13A1-213ENST00000520267 TXNRD3Q86VQ6 643 aa29.79■■■□□ 2.36
COL13A1-213ENST00000520267 TRIM22Q8IYM9 498 aa29.79■■■□□ 2.36
COL13A1-213ENST00000520267 SBF2Q86WG5 1849 aa29.78■■■□□ 2.36
COL13A1-213ENST00000520267 CHAF1AQ13111 956 aaPredicted RBP29.78■■■□□ 2.36
COL13A1-213ENST00000520267 CTR9Q6PD62 1173 aa29.78■■■□□ 2.36
COL13A1-213ENST00000520267 PDS5AQ29RF7 1337 aaKnown RBP29.78■■■□□ 2.36
COL13A1-213ENST00000520267 PPP6R2O75170 966 aa29.78■■■□□ 2.36
COL13A1-213ENST00000520267 RCAN1P53805 252 aa29.78■■■□□ 2.36
COL13A1-213ENST00000520267 NOLC1Q14978 699 aaKnown RBP eCLIP29.78■■■□□ 2.36
COL13A1-213ENST00000520267 DHX40Q8IX18 779 aaKnown RBP29.78■■■□□ 2.36
COL13A1-213ENST00000520267 FBXW7Q969H0 707 aa29.78■■■□□ 2.36
COL13A1-213ENST00000520267 KIAA1468Q9P260 1216 aa29.78■■■□□ 2.36
COL13A1-213ENST00000520267 KCNJ14Q9UNX9 436 aa29.78■■■□□ 2.36
COL13A1-213ENST00000520267 MMP1P03956 469 aa29.77■■■□□ 2.36
COL13A1-213ENST00000520267 PTGS1P23219 599 aa29.77■■■□□ 2.36
COL13A1-213ENST00000520267 CCDC196A0A1B0GTZ2 297 aa29.76■■■□□ 2.36
COL13A1-213ENST00000520267 BTBD18B2RXH4 712 aa29.76■■■□□ 2.36
COL13A1-213ENST00000520267 PRDX5P30044 214 aa29.76■■■□□ 2.36
COL13A1-213ENST00000520267 PRDM1O75626 825 aa29.76■■■□□ 2.35
COL13A1-213ENST00000520267 RFC4P35249 363 aa29.76■■■□□ 2.35
COL13A1-213ENST00000520267 ARHGAP30Q7Z6I6 1101 aaPredicted RBP29.76■■■□□ 2.35
COL13A1-213ENST00000520267 ZSCAN10Q96SZ4 725 aaPredicted RBP29.76■■■□□ 2.35
COL13A1-213ENST00000520267 PYCARDQ9ULZ3 195 aa29.76■■■□□ 2.35
COL13A1-213ENST00000520267 MYH6P13533 1939 aa29.76■■■□□ 2.35
COL13A1-213ENST00000520267 SPATA31A6Q5VVP1 1343 aa29.76■■■□□ 2.35
COL13A1-213ENST00000520267 NPHP1O15259 732 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 EVX2Q03828 476 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 SLC51AQ86UW1 340 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 NOSTRINQ8IVI9 506 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 DRC7Q8IY82 874 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 ENAHQ8N8S7 591 aaPredicted RBP29.75■■■□□ 2.35
COL13A1-213ENST00000520267 AATFQ9NY61 560 aaKnown RBP eCLIP29.75■■■□□ 2.35
COL13A1-213ENST00000520267 IRS2Q9Y4H2 1338 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 USP17L12C9JPN9 530 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 USP17L21D6R901 530 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 DEXIO95424 95 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 SHC4Q6S5L8 630 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 CEP57L1Q8IYX8 460 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 NRBP1Q9UHY1 535 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 JAG2Q9Y219 1238 aa29.75■■■□□ 2.35
COL13A1-213ENST00000520267 CCDC88AQ3V6T2 1871 aa29.74■■■□□ 2.35
COL13A1-213ENST00000520267 TRAPPC3LQ5T215 181 aa29.74■■■□□ 2.35
COL13A1-213ENST00000520267 SARM1Q6SZW1 724 aa29.74■■■□□ 2.35
COL13A1-213ENST00000520267 DIS3L2Q8IYB7 885 aaKnown RBP29.74■■■□□ 2.35
COL13A1-213ENST00000520267 JMYQ8N9B5 988 aa29.74■■■□□ 2.35
COL13A1-213ENST00000520267 TPM2P07951 284 aa29.74■■■□□ 2.35
COL13A1-213ENST00000520267 FGRP09769 529 aa29.74■■■□□ 2.35
COL13A1-213ENST00000520267 CCDC186Q7Z3E2 898 aa29.74■■■□□ 2.35
COL13A1-213ENST00000520267 BECN2A8MW95 431 aa29.73■■■□□ 2.35
COL13A1-213ENST00000520267 TERF1P54274 439 aa29.73■■■□□ 2.35
COL13A1-213ENST00000520267 FAM196AQ6ZSG2 479 aa29.73■■■□□ 2.35
COL13A1-213ENST00000520267 GJD4Q96KN9 370 aaPredicted RBP29.73■■■□□ 2.35
COL13A1-213ENST00000520267 CLIC6Q96NY7 704 aa29.73■■■□□ 2.35
COL13A1-213ENST00000520267 HPSEQ9Y251 543 aa29.73■■■□□ 2.35
COL13A1-213ENST00000520267 SLC3A2P08195 630 aaKnown RBP29.73■■■□□ 2.35
COL13A1-213ENST00000520267 SAFBQ15424 915 aaKnown RBP eCLIP29.73■■■□□ 2.35
COL13A1-213ENST00000520267 MAST2Q6P0Q8 1798 aa29.73■■■□□ 2.35
COL13A1-213ENST00000520267 KIAA1524Q8TCG1 905 aa29.73■■■□□ 2.35
COL13A1-213ENST00000520267 DLEC1Q9Y238 1755 aa29.73■■■□□ 2.35
COL13A1-213ENST00000520267 NFIXQ14938 502 aa29.72■■■□□ 2.35
COL13A1-213ENST00000520267 AOPEPQ8N6M6 819 aa29.72■■■□□ 2.35
COL13A1-213ENST00000520267 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.72■■■□□ 2.35
COL13A1-213ENST00000520267 SPTLC3Q9NUV7 552 aa29.72■■■□□ 2.35
COL13A1-213ENST00000520267 TOB1P50616 345 aaPredicted RBP29.71■■■□□ 2.35
COL13A1-213ENST00000520267 DCP1AQ9NPI6 582 aaPredicted RBP29.71■■■□□ 2.35
COL13A1-213ENST00000520267 LAMB1P07942 1786 aa29.71■■■□□ 2.35
COL13A1-213ENST00000520267 SYKP43405 635 aa29.71■■■□□ 2.35
COL13A1-213ENST00000520267 DPCR1Q3MIW9 517 aa29.71■■■□□ 2.35
COL13A1-213ENST00000520267 CRNKL1Q9BZJ0 848 aaKnown RBP29.71■■■□□ 2.35
COL13A1-213ENST00000520267 IFIT1BQ5T764 474 aaKnown RBP29.7■■■□□ 2.35
COL13A1-213ENST00000520267 NAT10Q9H0A0 1025 aaKnown RBP29.7■■■□□ 2.35
COL13A1-213ENST00000520267 FOXP1Q9H334 677 aaPredicted RBP29.7■■■□□ 2.35
COL13A1-213ENST00000520267 CLIP2Q9UDT6 1046 aa29.7■■■□□ 2.35
COL13A1-213ENST00000520267 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.7■■■□□ 2.35
COL13A1-213ENST00000520267 PCP11498 1178 aaKnown RBP29.7■■■□□ 2.34
COL13A1-213ENST00000520267 CDC25BP30305 580 aa29.7■■■□□ 2.34
COL13A1-213ENST00000520267 RESP18Q5W5W9 173 aa29.7■■■□□ 2.34
COL13A1-213ENST00000520267 TIGD1Q96MW7 591 aa29.7■■■□□ 2.34
COL13A1-213ENST00000520267 FAM237AA0A1B0GTK4 181 aa29.69■■■□□ 2.34
COL13A1-213ENST00000520267 CUTAO60888 179 aa29.69■■■□□ 2.34
COL13A1-213ENST00000520267 BIN1O00499 593 aa29.69■■■□□ 2.34
COL13A1-213ENST00000520267 NR5A1Q13285 461 aa29.69■■■□□ 2.34
COL13A1-213ENST00000520267 PPP2R5BQ15173 497 aa29.69■■■□□ 2.34
COL13A1-213ENST00000520267 IQCA1Q86XH1 822 aa29.69■■■□□ 2.34
COL13A1-213ENST00000520267 RNF26Q9BY78 433 aaPredicted RBP29.69■■■□□ 2.34
COL13A1-213ENST00000520267 LRRC4BQ9NT99 713 aa29.69■■■□□ 2.34
COL13A1-213ENST00000520267 GRAPQ13588 217 aa29.68■■■□□ 2.34
COL13A1-213ENST00000520267 CATIPQ7Z7H3 387 aa29.68■■■□□ 2.34
COL13A1-213ENST00000520267 GRAPLQ8TC17 118 aaPredicted RBP29.68■■■□□ 2.34
COL13A1-213ENST00000520267 SHISA4Q96DD7 197 aa29.68■■■□□ 2.34
COL13A1-213ENST00000520267 KIAA1551Q9HCM1 1747 aa29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms