RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CTDSPL2Q05D32 466 aa21.15■□□□□ 0.98
SDC2-205ENST00000520233 GABPAQ06546 454 aa21.15■□□□□ 0.98
SDC2-205ENST00000520233 SUPT20HL1Q3ZLR7 823 aa21.15■□□□□ 0.98
SDC2-205ENST00000520233 NBPF12Q5TAG4 269 aaPredicted RBP21.15■□□□□ 0.98
SDC2-205ENST00000520233 PRAMEF18Q5VWM3 479 aa21.15■□□□□ 0.98
SDC2-205ENST00000520233 METTL16Q86W50 562 aaKnown RBP21.15■□□□□ 0.98
SDC2-205ENST00000520233 CDAN1Q8IWY9 1227 aa21.15■□□□□ 0.98
SDC2-205ENST00000520233 KCNB2Q92953 911 aa21.15■□□□□ 0.98
SDC2-205ENST00000520233 SERPINB13Q9UIV8 391 aa21.15■□□□□ 0.98
SDC2-205ENST00000520233 TBC1D12O60347 775 aa21.14■□□□□ 0.97
SDC2-205ENST00000520233 MAP3K10Q02779 954 aa21.14■□□□□ 0.97
SDC2-205ENST00000520233 NBPF3Q9H094 633 aa21.14■□□□□ 0.97
SDC2-205ENST00000520233 HERC5Q9UII4 1024 aaKnown RBP21.14■□□□□ 0.97
SDC2-205ENST00000520233 LAMB1P07942 1786 aa21.14■□□□□ 0.97
SDC2-205ENST00000520233 ZKSCAN1P17029 563 aaPredicted RBP21.13■□□□□ 0.97
SDC2-205ENST00000520233 TSGA10IPQ3SY00 556 aa21.13■□□□□ 0.97
SDC2-205ENST00000520233 DLK2Q6UY11 383 aa21.13■□□□□ 0.97
SDC2-205ENST00000520233 C16orf86Q6ZW13 317 aa21.13■□□□□ 0.97
SDC2-205ENST00000520233 CRACR2BQ8N4Y2 399 aaPredicted RBP21.13■□□□□ 0.97
SDC2-205ENST00000520233 STAG1Q8WVM7 1258 aa21.13■□□□□ 0.97
SDC2-205ENST00000520233 CDCA5Q96FF9 252 aa21.13■□□□□ 0.97
SDC2-205ENST00000520233 DYNLL2Q96FJ2 89 aa21.13■□□□□ 0.97
SDC2-205ENST00000520233 TRIM34Q9BYJ4 488 aa21.13■□□□□ 0.97
SDC2-205ENST00000520233 SWAP70Q9UH65 585 aa21.13■□□□□ 0.97
SDC2-205ENST00000520233 POLR2AP24928 1970 aaKnown RBP21.13■□□□□ 0.97
SDC2-205ENST00000520233 FGRP09769 529 aa21.12■□□□□ 0.97
SDC2-205ENST00000520233 PCP11498 1178 aaKnown RBP21.12■□□□□ 0.97
SDC2-205ENST00000520233 PDE4BQ07343 736 aa21.12■□□□□ 0.97
SDC2-205ENST00000520233 AKNAD1Q5T1N1 836 aa21.12■□□□□ 0.97
SDC2-205ENST00000520233 DCAF15Q66K64 600 aa21.12■□□□□ 0.97
SDC2-205ENST00000520233 TBC1D10CQ8IV04 446 aa21.12■□□□□ 0.97
SDC2-205ENST00000520233 RNF41Q9H4P4 317 aaPredicted RBP21.12■□□□□ 0.97
SDC2-205ENST00000520233 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.12■□□□□ 0.977e-12■■■□□ 14.7
SDC2-205ENST00000520233 ZNF287Q9HBT7 754 aa21.12■□□□□ 0.97
SDC2-205ENST00000520233 LAMA4Q16363 1823 aa21.12■□□□□ 0.97
SDC2-205ENST00000520233 SIPA1L1O43166 1804 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 TOMM70O94826 608 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 NF2P35240 595 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 CDK8P49336 464 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 MFSD6Q6ZSS7 791 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 RASEFQ8IZ41 740 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 C22orf23Q9BZE7 217 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 DNAJC18Q9H819 358 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.11■□□□□ 0.97
SDC2-205ENST00000520233 TACC3Q9Y6A5 838 aa21.11■□□□□ 0.97
SDC2-205ENST00000520233 E7EWF7 191 aa21.1■□□□□ 0.97
SDC2-205ENST00000520233 ITGBL1O95965 494 aaPredicted RBP21.1■□□□□ 0.97
SDC2-205ENST00000520233 MIGA2Q7L4E1 593 aa21.1■□□□□ 0.97
SDC2-205ENST00000520233 STK11IPQ8N1F8 1099 aa21.1■□□□□ 0.97
SDC2-205ENST00000520233 SMC1BQ8NDV3 1235 aa21.1■□□□□ 0.97
SDC2-205ENST00000520233 RBM46Q8TBY0 533 aaKnown RBP21.1■□□□□ 0.97
SDC2-205ENST00000520233 SNX14Q9Y5W7 946 aa21.1■□□□□ 0.97
SDC2-205ENST00000520233 TAF6LQ9Y6J9 622 aa21.1■□□□□ 0.97
SDC2-205ENST00000520233 SSC5DA1L4H1 1573 aa21.1■□□□□ 0.97
SDC2-205ENST00000520233 FAM196BA6NMK8 535 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 TRAF5O00463 557 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 ORC4O43929 436 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 SLURP2P0DP57 97 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 SHMT1P34896 483 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 RBM25P49756 843 aaKnown RBP21.09■□□□□ 0.97
SDC2-205ENST00000520233 ANAPC15P60006 121 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 KRT32Q14532 448 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 TATDN1Q6P1N9 297 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 SLC44A5Q8NCS7 719 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 CNNM2Q9H8M5 875 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 MKNK2Q9HBH9 465 aa21.09■□□□□ 0.97
SDC2-205ENST00000520233 NT5C2P49902 561 aa21.08■□□□□ 0.97
SDC2-205ENST00000520233 STOX1Q6ZVD7 989 aa21.08■□□□□ 0.97
SDC2-205ENST00000520233 ZNF341Q9BYN7 854 aa21.08■□□□□ 0.97
SDC2-205ENST00000520233 INCENPQ9NQS7 918 aa21.08■□□□□ 0.97
SDC2-205ENST00000520233 NEDD4P46934 1319 aa21.07■□□□□ 0.96
SDC2-205ENST00000520233 TRDNQ13061 729 aa21.07■□□□□ 0.96
SDC2-205ENST00000520233 IL17RAQ96F46 866 aa21.07■□□□□ 0.96
SDC2-205ENST00000520233 TBC1D32Q96NH3 1257 aa21.07■□□□□ 0.96
SDC2-205ENST00000520233 KRT23Q9C075 422 aa21.07■□□□□ 0.96
SDC2-205ENST00000520233 PPP1R12BO60237 982 aaPredicted RBP21.06■□□□□ 0.96
SDC2-205ENST00000520233 USP2O75604 605 aaPredicted RBP21.06■□□□□ 0.96
SDC2-205ENST00000520233 PRDM1O75626 825 aa21.06■□□□□ 0.96
SDC2-205ENST00000520233 RASA1P20936 1047 aa21.06■□□□□ 0.96
SDC2-205ENST00000520233 FMR1Q06787 632 aaKnown RBP eCLIP21.06■□□□□ 0.96
SDC2-205ENST00000520233 ZNF444Q8N0Y2 327 aaPredicted RBP21.06■□□□□ 0.96
SDC2-205ENST00000520233 NCOA7Q8NI08 942 aa21.06■□□□□ 0.96
SDC2-205ENST00000520233 CCDC17Q96LX7 622 aa21.06■□□□□ 0.96
SDC2-205ENST00000520233 TOMM22Q9NS69 142 aa21.06■□□□□ 0.96
SDC2-205ENST00000520233 ZNF112Q9UJU3 913 aa21.06■□□□□ 0.96
SDC2-205ENST00000520233 PHF20L1A8MW92 1017 aa21.05■□□□□ 0.96
SDC2-205ENST00000520233 PSMA5P28066 241 aa21.05■□□□□ 0.96
SDC2-205ENST00000520233 ADCK5Q3MIX3 580 aa21.05■□□□□ 0.96
SDC2-205ENST00000520233 CERKLQ49MI3 558 aaPredicted RBP21.05■□□□□ 0.96
SDC2-205ENST00000520233 RRP12Q5JTH9 1297 aaKnown RBP21.05■□□□□ 0.96
SDC2-205ENST00000520233 RALYLQ86SE5 291 aaKnown RBP21.05■□□□□ 0.96
SDC2-205ENST00000520233 ESR2Q92731 530 aa21.05■□□□□ 0.96
SDC2-205ENST00000520233 KLRG1Q96E93 195 aa21.05■□□□□ 0.96
SDC2-205ENST00000520233 NEK1Q96PY6 1258 aa21.05■□□□□ 0.96
SDC2-205ENST00000520233 FSTL1Q12841 308 aa21.04■□□□□ 0.96
SDC2-205ENST00000520233 MAP3K11Q16584 847 aa21.04■□□□□ 0.96
SDC2-205ENST00000520233 PASKQ96RG2 1323 aa21.04■□□□□ 0.96
SDC2-205ENST00000520233 B4E1Z4 1266 aa21.03■□□□□ 0.96
SDC2-205ENST00000520233 RANBP6O60518 1105 aaKnown RBP21.03■□□□□ 0.96
SDC2-205ENST00000520233 CTNND1O60716 968 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms