RNA–Protein interactions for RNA: ENST00000519684.5

HMGB4-203, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB4, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-203ENST00000519684 ARPP21Q9UBL0 812 aaPredicted RBP9.78□□□□□ -0.84
HMGB4-203ENST00000519684 USP25Q9UHP3 1055 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 CLIC4Q9Y696 253 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 DLEC1Q9Y238 1755 aa9.78□□□□□ -0.84
HMGB4-203ENST00000519684 A0A1W2PQ27 194 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 A0A1W2PQ64 194 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 A0A1W2PQD8 194 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 KIF28PB7ZC32 967 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 USP17L12C9JPN9 530 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 USP17L21D6R901 530 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 SPTLC2O15270 562 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 ATP2B4P23634 1241 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 IFIT1BQ5T764 474 aaKnown RBP9.77□□□□□ -0.85
HMGB4-203ENST00000519684 ANO1Q5XXA6 986 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 ADALQ6DHV7 355 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 CATIPQ7Z7H3 387 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 AIFM3Q96NN9 605 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 PCDHA7Q9UN72 937 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 JAG2Q9Y219 1238 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 MRVI1Q9Y6F6 885 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 CYP2D7A0A087X1C5 515 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 UFL1O94874 794 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 DEXIO95424 95 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 PLCB2Q00722 1185 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 AKAP17AQ02040 695 aaKnown RBP9.77□□□□□ -0.85
HMGB4-203ENST00000519684 CRY2Q49AN0 593 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 C15orf52Q6ZUT6 534 aaKnown RBP9.77□□□□□ -0.85
HMGB4-203ENST00000519684 AMOTL1Q8IY63 956 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 JMYQ8N9B5 988 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 FANCBQ8NB91 859 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 TDRD7Q8NHU6 1098 aaKnown RBP9.77□□□□□ -0.85
HMGB4-203ENST00000519684 GOLPH3LQ9H4A5 285 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 DCP1AQ9NPI6 582 aaPredicted RBP9.77□□□□□ -0.85
HMGB4-203ENST00000519684 GGA1Q9UJY5 639 aa9.77□□□□□ -0.85
HMGB4-203ENST00000519684 ADCY5O95622 1261 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 CAVIN2O95810 425 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 BAG3O95817 575 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 LDHCP07864 332 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 CALM1P0DP23 149 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 CALM2P0DP24 149 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 CALM3P0DP25 149 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 USP5P45974 858 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 GPSM2P81274 684 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 PDE4BQ07343 736 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 SEC23AQ15436 765 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 ANO6Q4KMQ2 910 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 MYH2Q9UKX2 1941 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 ORC4O43929 436 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 BBOX1O75936 387 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 FGRP09769 529 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 SBK1Q52WX2 424 aa9.76□□□□□ -0.85
HMGB4-203ENST00000519684 CRACR2BQ8N4Y2 399 aaPredicted RBP9.76□□□□□ -0.85
HMGB4-203ENST00000519684 ENAHQ8N8S7 591 aaPredicted RBP9.76□□□□□ -0.85
HMGB4-203ENST00000519684 RBM28Q9NW13 759 aaKnown RBP9.76□□□□□ -0.85
HMGB4-203ENST00000519684 MYH6P13533 1939 aa9.75□□□□□ -0.85
HMGB4-203ENST00000519684 PRDM1O75626 825 aa9.75□□□□□ -0.85
HMGB4-203ENST00000519684 XBP1P17861 261 aa9.75□□□□□ -0.85
HMGB4-203ENST00000519684 U2AF2P26368 475 aaKnown RBP eCLIP9.75□□□□□ -0.85
HMGB4-203ENST00000519684 STX1AQ16623 288 aa9.75□□□□□ -0.85
HMGB4-203ENST00000519684 TXNRD1Q16881 649 aa9.75□□□□□ -0.85
HMGB4-203ENST00000519684 CERS3Q8IU89 383 aa9.75□□□□□ -0.85
HMGB4-203ENST00000519684 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.75□□□□□ -0.85
HMGB4-203ENST00000519684 MCM9Q9NXL9 1143 aa9.75□□□□□ -0.85
HMGB4-203ENST00000519684 NOL7Q9UMY1 257 aaKnown RBP9.75□□□□□ -0.85
HMGB4-203ENST00000519684 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.75□□□□□ -0.85
HMGB4-203ENST00000519684 NAV1Q8NEY1 1877 aa9.75□□□□□ -0.85
HMGB4-203ENST00000519684 DDAH1O94760 285 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 MMP1P03956 469 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 NT5C2P49902 561 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 SNW1Q13573 536 aaKnown RBP9.74□□□□□ -0.85
HMGB4-203ENST00000519684 SLC39A14Q15043 492 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 ZRSR1Q15695 479 aaKnown RBP9.74□□□□□ -0.85
HMGB4-203ENST00000519684 TMC4Q7Z404 712 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 NBPF11Q86T75 865 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 ENGASEQ8NFI3 743 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 CRAMP1Q96RY5 1269 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 RNF26Q9BY78 433 aaPredicted RBP9.74□□□□□ -0.85
HMGB4-203ENST00000519684 TSPY2A6NKD2 308 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 POLRMTO00411 1230 aaKnown RBP9.74□□□□□ -0.85
HMGB4-203ENST00000519684 DDR1Q08345 913 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 NOSTRINQ8IVI9 506 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 GPR101Q96P66 508 aaPredicted RBP9.74□□□□□ -0.85
HMGB4-203ENST00000519684 SDF4Q9BRK5 362 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 CBX8Q9HC52 389 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 ZKSCAN5Q9Y2L8 839 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 LRRC37AA6NMS7 1700 aa9.74□□□□□ -0.85
HMGB4-203ENST00000519684 A0A1B0GVL5 298 aa9.73□□□□□ -0.85
HMGB4-203ENST00000519684 SMIM22K7EJ46 135 aa9.73□□□□□ -0.85
HMGB4-203ENST00000519684 PPP6R2O75170 966 aa9.73□□□□□ -0.85
HMGB4-203ENST00000519684 CYP2D6P10635 497 aa9.73□□□□□ -0.85
HMGB4-203ENST00000519684 HOXA10P31260 410 aaPredicted RBP9.73□□□□□ -0.85
HMGB4-203ENST00000519684 ZNF165P49910 485 aa9.73□□□□□ -0.85
HMGB4-203ENST00000519684 NDUFA8P51970 172 aa9.73□□□□□ -0.85
HMGB4-203ENST00000519684 SLF2Q8IX21 1173 aa9.73□□□□□ -0.85
HMGB4-203ENST00000519684 DIS3L2Q8IYB7 885 aaKnown RBP9.73□□□□□ -0.85
HMGB4-203ENST00000519684 FMR1NBQ8N0W7 255 aaPredicted RBP9.73□□□□□ -0.85
HMGB4-203ENST00000519684 CTCFLQ8NI51 663 aaPredicted RBP9.73□□□□□ -0.85
HMGB4-203ENST00000519684 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
HMGB4-203ENST00000519684 FOXP1Q9H334 677 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms