RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 EBAG9O00559 213 aa9.64□□□□□ -0.87
TRPS1-209ENST00000519674 FSBPO95073 299 aa9.64□□□□□ -0.87
TRPS1-209ENST00000519674 PSMA5P28066 241 aa9.64□□□□□ -0.87
TRPS1-209ENST00000519674 GJB2P29033 226 aa9.64□□□□□ -0.87
TRPS1-209ENST00000519674 KRT85P78386 507 aa9.64□□□□□ -0.87
TRPS1-209ENST00000519674 GNL2Q13823 731 aaKnown RBP9.64□□□□□ -0.87
TRPS1-209ENST00000519674 C11orf57Q6ZUT1 292 aaPredicted RBP9.64□□□□□ -0.87
TRPS1-209ENST00000519674 ANKRD18AQ8IVF6 992 aa9.64□□□□□ -0.87
TRPS1-209ENST00000519674 DHX40Q8IX18 779 aaKnown RBP9.64□□□□□ -0.87
TRPS1-209ENST00000519674 MICAL1Q8TDZ2 1067 aa9.64□□□□□ -0.87
TRPS1-209ENST00000519674 TPCN1Q9ULQ1 816 aa9.64□□□□□ -0.87
TRPS1-209ENST00000519674 SNUPNO95149 360 aaKnown RBP9.63□□□□□ -0.87
TRPS1-209ENST00000519674 HMGB1P09429 215 aaKnown RBP9.63□□□□□ -0.87
TRPS1-209ENST00000519674 ST3GAL1Q11201 340 aa9.63□□□□□ -0.87
TRPS1-209ENST00000519674 TBC1D25Q3MII6 688 aa9.63□□□□□ -0.87
TRPS1-209ENST00000519674 BLOC1S2Q6QNY1 142 aa9.63□□□□□ -0.87
TRPS1-209ENST00000519674 PUS3Q9BZE2 481 aaKnown RBP9.63□□□□□ -0.87
TRPS1-209ENST00000519674 SH2B1Q9NRF2 756 aaPredicted RBP9.63□□□□□ -0.87
TRPS1-209ENST00000519674 CPSF2Q9P2I0 782 aaKnown RBP9.63□□□□□ -0.87
TRPS1-209ENST00000519674 EYA2O00167 538 aa9.63□□□□□ -0.87
TRPS1-209ENST00000519674 PRPF6O94906 941 aaKnown RBP9.63□□□□□ -0.87
TRPS1-209ENST00000519674 NEFHP12036 1026 aa9.63□□□□□ -0.87
TRPS1-209ENST00000519674 IL15P40933 162 aaPredicted RBP9.63□□□□□ -0.87
TRPS1-209ENST00000519674 HSP90B2PQ58FF3 399 aa9.63□□□□□ -0.87
TRPS1-209ENST00000519674 MSANTD4Q8NCY6 345 aa9.63□□□□□ -0.87
TRPS1-209ENST00000519674 ANKZF1Q9H8Y5 726 aa9.63□□□□□ -0.87
TRPS1-209ENST00000519674 ECM2O94769 699 aaPredicted RBP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 SFPQP23246 707 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 TCIRG1Q13488 830 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 RBBP5Q15291 538 aaKnown RBP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 DRAXINQ8NBI3 349 aaPredicted RBP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 FAM89AQ96GI7 184 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 ZSCAN31Q96LW9 406 aaPredicted RBP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 JCADQ9P266 1359 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 ITGB4P16144 1822 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 NR1I2O75469 434 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 AP1G2O75843 785 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 PECAM1P16284 738 aaPredicted RBP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 PDCD2Q16342 344 aaPredicted RBP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 CDCA2Q69YH5 1023 aaPredicted RBP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 TLDC1Q6P9B6 456 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 KIF6Q6ZMV9 814 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 KBTBD3Q8NAB2 608 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 AFAP1L1Q8TED9 768 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 ISCA1Q9BUE6 129 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 FAM163BP0C2L3 166 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 RPS6KB1P23443 525 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 CCT5P48643 541 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 AARSP49588 968 aaKnown RBP eCLIP9.62□□□□□ -0.87
TRPS1-209ENST00000519674 CASP8Q14790 479 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 CCDC57Q2TAC2 916 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 MCMDC2Q4G0Z9 681 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 CEP112Q8N8E3 955 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 HMG20BQ9P0W2 317 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 CAPN7Q9Y6W3 813 aa9.62□□□□□ -0.87
TRPS1-209ENST00000519674 VPS37CA5D8V6 355 aaPredicted RBP9.61□□□□□ -0.87
TRPS1-209ENST00000519674 POTEB2H3BUK9 544 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 MYO1FO00160 1098 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 MAFGO15525 162 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 NRDCO43847 1150 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 ERLIN1O75477 346 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 STX1AQ16623 288 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 PRDM16Q9HAZ2 1276 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 RFX7Q2KHR2 1363 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 VWA3AA6NCI4 1184 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 RNF40O75150 1001 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 STARD3NLO95772 234 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 STK3Q13188 491 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 FCHSD1Q86WN1 690 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 PARD3BQ8TEW8 1205 aa9.61□□□□□ -0.87
TRPS1-209ENST00000519674 SCAND2PQ9GZW5 306 aaPredicted RBP9.61□□□□□ -0.87
TRPS1-209ENST00000519674 PHACTR2O75167 634 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 SLC8A3P57103 927 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 TOB2Q14106 344 aaPredicted RBP9.6□□□□□ -0.87
TRPS1-209ENST00000519674 USPL1Q5W0Q7 1092 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 RCSD1Q6JBY9 416 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 SYNE4Q8N205 404 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 MAB21L3Q8N8X9 362 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 CCDC102AQ96A19 550 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 KIFC2Q96AC6 838 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 SUGCTQ9HAC7 445 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 KIF9Q9HAQ2 790 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 ABCB6Q9NP58 842 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 SYF2O95926 243 aaKnown RBP9.6□□□□□ -0.87
TRPS1-209ENST00000519674 CYP21A2P08686 494 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 IFIT1P09914 478 aaKnown RBP9.6□□□□□ -0.87
TRPS1-209ENST00000519674 GCKP35557 465 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 PRPHP41219 470 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 HLFQ16534 295 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 TRIM74Q86UV6 250 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 TRIM73Q86UV7 250 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 GPR108Q9NPR9 543 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 CDHR2Q9BYE9 1310 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 BECN2A8MW95 431 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 CIAO1O76071 339 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 CLNS1AP54105 237 aaKnown RBP9.6□□□□□ -0.87
TRPS1-209ENST00000519674 ANKRD1Q15327 319 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 MAGEC3Q8TD91 643 aa9.6□□□□□ -0.87
TRPS1-209ENST00000519674 NEK1Q96PY6 1258 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms