RNA–Protein interactions for RNA: ENST00000518096.1

TUBBP1-202, Transcript of tubulin beta pseudogene 1, humanhuman

BASIC

Gene TUBBP1, Length 1,646 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBBP1-202ENST00000518096 CPA1P15085 419 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 CASTP20810 708 aaKnown RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 TNFAIP1Q13829 316 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 RASA3Q14644 834 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 RRP12Q5JTH9 1297 aaKnown RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 NEK1Q96PY6 1258 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 TMEM39BQ9GZU3 492 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 DHX36Q9H2U1 1008 aaKnown RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 WDR90Q96KV7 1748 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 PRDM1O75626 825 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 POTEJP0CG39 1038 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 PSMA5P28066 241 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 TRDNQ13061 729 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 COL9A3Q14050 684 aaPredicted RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 APOBEC3FQ8IUX4 373 aaKnown RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 RBM46Q8TBY0 533 aaKnown RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 STAG1Q8WVM7 1258 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 IL17RAQ96F46 866 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 DEFB129Q9H1M3 183 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 RNF41Q9H4P4 317 aaPredicted RBP12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 PI4KBQ9UBF8 816 aa12.7□□□□□ -0.38
TUBBP1-202ENST00000518096 DDX60LQ5H9U9 1706 aaKnown RBP12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 SLURP2P0DP57 97 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 NEK4P51957 841 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 PDE4BQ07343 736 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 RABEP1Q15276 862 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 BLOC1S2Q6QNY1 142 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 RALYLQ86SE5 291 aaKnown RBP12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 CRACR2BQ8N4Y2 399 aaPredicted RBP12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 DNAJC5GQ8N7S2 189 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 SLC44A5Q8NCS7 719 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 NCOA7Q8NI08 942 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 DCPSQ96C86 337 aaKnown RBP12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 CSRNP1Q96S65 589 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 TM6SF1Q9BZW5 370 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 MKNK2Q9HBH9 465 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
TUBBP1-202ENST00000518096 NEDD4P46934 1319 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 B4E1Z4 1266 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 VEGFAP15692 232 aaPredicted RBP12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 CDK8P49336 464 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 CHST3Q7LGC8 479 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 PNMA8AQ86V59 439 aaPredicted RBP12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 CDAN1Q8IWY9 1227 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 NKX2-3Q8TAU0 364 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 TRIM34Q9BYJ4 488 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 KRT23Q9C075 422 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 CNNM2Q9H8M5 875 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 SERPINB13Q9UIV8 391 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 CLEC11AQ9Y240 323 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 CYP46A1Q9Y6A2 500 aa12.68□□□□□ -0.38
TUBBP1-202ENST00000518096 ATRNL1Q5VV63 1379 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 ROBO3Q96MS0 1386 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 FAM196BA6NMK8 535 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 RANBP6O60518 1105 aaKnown RBP12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 KDM4AO75164 1064 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 GABPAQ06546 454 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 PRAMEF18Q5VWM3 479 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 C16orf86Q6ZW13 317 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 FOXP4Q8IVH2 680 aaPredicted RBP12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 PITPNM2Q9BZ72 1349 aa12.67□□□□□ -0.38
TUBBP1-202ENST00000518096 ORC4O43929 436 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 HMGB1P09429 215 aaKnown RBP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 FGRP09769 529 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 PCP11498 1178 aaKnown RBP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 CYB5R4Q7L1T6 521 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 DHX32Q7L7V1 743 aaKnown RBP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 SULF1Q8IWU6 871 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 MB21D2Q8IYB1 491 aaPredicted RBP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 ZNF444Q8N0Y2 327 aaPredicted RBP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 ZC3H15Q8WU90 426 aaKnown RBP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 TEPSINQ96N21 525 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 EHD4Q9H223 541 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 ZNF287Q9HBT7 754 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 PDRG1Q9NUG6 133 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 ZSWIM5Q9P217 1185 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 PGAP2Q9UHJ9 254 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 COL2A1P02458 1487 aaPredicted RBP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 SIPA1L1O43166 1804 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 MCM5P33992 734 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 NBPF12Q5TAG4 269 aaPredicted RBP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 DLK2Q6UY11 383 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 MIGA2Q7L4E1 593 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 KRT26Q7Z3Y9 468 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 USP48Q86UV5 1035 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 ESR2Q92731 530 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 SWAP70Q9UH65 585 aa12.66□□□□□ -0.38
TUBBP1-202ENST00000518096 TSPY2A6NKD2 308 aa12.65□□□□□ -0.38
TUBBP1-202ENST00000518096 ADM5C9JUS6 153 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms