RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 MAGEB6P1A0A0J9YX57 407 aa17.09■□□□□ 0.33
PDGFRB-202ENST00000517488 CHGBP05060 677 aa17.09■□□□□ 0.33
PDGFRB-202ENST00000517488 USP5P45974 858 aa17.09■□□□□ 0.33
PDGFRB-202ENST00000517488 MOGSQ13724 837 aa17.09■□□□□ 0.33
PDGFRB-202ENST00000517488 SLC4A8Q2Y0W8 1093 aa17.09■□□□□ 0.33
PDGFRB-202ENST00000517488 CTU1Q7Z7A3 348 aaKnown RBP17.09■□□□□ 0.33
PDGFRB-202ENST00000517488 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
PDGFRB-202ENST00000517488 MAST2Q6P0Q8 1798 aa17.09■□□□□ 0.33
PDGFRB-202ENST00000517488 AK9Q5TCS8 1911 aa17.08■□□□□ 0.33
PDGFRB-202ENST00000517488 MYO5AQ9Y4I1 1855 aaKnown RBP17.08■□□□□ 0.33
PDGFRB-202ENST00000517488 CXCL11O14625 94 aa17.08■□□□□ 0.32
PDGFRB-202ENST00000517488 TAF1CQ15572 869 aaPredicted RBP17.08■□□□□ 0.32
PDGFRB-202ENST00000517488 METTL16Q86W50 562 aaKnown RBP17.08■□□□□ 0.32
PDGFRB-202ENST00000517488 OTUD7AQ8TE49 926 aaPredicted RBP17.08■□□□□ 0.32
PDGFRB-202ENST00000517488 DNAJC18Q9H819 358 aa17.08■□□□□ 0.32
PDGFRB-202ENST00000517488 HERC5Q9UII4 1024 aaKnown RBP17.08■□□□□ 0.32
PDGFRB-202ENST00000517488 AFG3L2Q9Y4W6 797 aa17.08■□□□□ 0.32
PDGFRB-202ENST00000517488 ADD2P35612 726 aa17.07■□□□□ 0.32
PDGFRB-202ENST00000517488 FOXP4Q8IVH2 680 aaPredicted RBP17.07■□□□□ 0.32
PDGFRB-202ENST00000517488 ZFYVE28Q9HCC9 887 aa17.07■□□□□ 0.32
PDGFRB-202ENST00000517488 CAP2P40123 477 aa17.06■□□□□ 0.32
PDGFRB-202ENST00000517488 JAG1P78504 1218 aa17.06■□□□□ 0.32
PDGFRB-202ENST00000517488 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
PDGFRB-202ENST00000517488 LCORLQ8N3X6 602 aa17.06■□□□□ 0.32
PDGFRB-202ENST00000517488 EXOC6Q8TAG9 804 aa17.06■□□□□ 0.32
PDGFRB-202ENST00000517488 GPATCH3Q96I76 525 aa17.06■□□□□ 0.32
PDGFRB-202ENST00000517488 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
PDGFRB-202ENST00000517488 DOCK2Q92608 1830 aa17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 A0A0G2JLL6 359 aaPredicted RBP17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 HLA-DOAP06340 250 aa17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 SHROOM1Q2M3G4 852 aaPredicted RBP17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 PRRT2Q7Z6L0 340 aaPredicted RBP17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 ANKRD23Q86SG2 305 aa17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 CRACR2BQ8N4Y2 399 aaPredicted RBP17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 ARMT1Q9H993 441 aa17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
PDGFRB-202ENST00000517488 TRIM75PA6NK02 468 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 CCDC85CA6NKD9 419 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 PDHXO00330 501 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 MBD4O95243 580 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 CAP1Q01518 475 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 SP3Q02447 781 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 ANKRD45Q5TZF3 282 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 TRIM34Q9BYJ4 488 aa17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 CRNKL1Q9BZJ0 848 aaKnown RBP17.04■□□□□ 0.32
PDGFRB-202ENST00000517488 LAMB1P07942 1786 aa17.03■□□□□ 0.32
PDGFRB-202ENST00000517488 PRKAB2O43741 272 aa17.03■□□□□ 0.32
PDGFRB-202ENST00000517488 TLR2O60603 784 aa17.03■□□□□ 0.32
PDGFRB-202ENST00000517488 PLCD1P51178 756 aa17.03■□□□□ 0.32
PDGFRB-202ENST00000517488 AAMPQ13685 434 aa17.03■□□□□ 0.32
PDGFRB-202ENST00000517488 USP17L5A8MUK1 530 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 GDF11O95390 407 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 EVX2Q03828 476 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 SPP2Q13103 211 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 GADL1Q6ZQY3 521 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 FASTKD5Q7L8L6 764 aaKnown RBP17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 OTOP1Q7RTM1 612 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 TTC6Q86TZ1 520 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 ZNF280CQ8ND82 737 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 PI4K2BQ8TCG2 481 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 GCC1Q96CN9 775 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 ERO1AQ96HE7 468 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 DCP1AQ9NPI6 582 aaPredicted RBP17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 SERPINB13Q9UIV8 391 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 TRIM17Q9Y577 477 aa17.02■□□□□ 0.32
PDGFRB-202ENST00000517488 TTC41PQ6P2S7 1318 aa17.01■□□□□ 0.31
PDGFRB-202ENST00000517488 POLR3DP05423 398 aaPredicted RBP17.01■□□□□ 0.31
PDGFRB-202ENST00000517488 PKN2Q16513 984 aaKnown RBP17.01■□□□□ 0.31
PDGFRB-202ENST00000517488 ZSCAN25Q6NSZ9 544 aa17.01■□□□□ 0.31
PDGFRB-202ENST00000517488 PUS7LQ9H0K6 701 aaKnown RBP17.01■□□□□ 0.31
PDGFRB-202ENST00000517488 EHD4Q9H223 541 aa17.01■□□□□ 0.31
PDGFRB-202ENST00000517488 MCM9Q9NXL9 1143 aa17.01■□□□□ 0.31
PDGFRB-202ENST00000517488 CPA4Q9UI42 421 aa17.01■□□□□ 0.31
PDGFRB-202ENST00000517488 SALL3Q9BXA9 1300 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 GLRX3O76003 335 aaKnown RBP17■□□□□ 0.31
PDGFRB-202ENST00000517488 IGHDP01880 384 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 ASNSP08243 561 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 CYP2C8P10632 490 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 CYP2D6P10635 497 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 MX1P20591 662 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 TATDN1Q6P1N9 297 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 C17orf99Q6UX52 265 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 ZBTB21Q9ULJ3 1066 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 HPS5Q9UPZ3 1129 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 SIPA1L1O43166 1804 aa17■□□□□ 0.31
PDGFRB-202ENST00000517488 ADGRA2Q96PE1 1338 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 ERC2O15083 957 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 GH2P01242 217 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 SHMT1P34896 483 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 HMGCS2P54868 508 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 GABPAQ06546 454 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 TREML2Q5T2D2 321 aa16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 FBXO46Q6PJ61 603 aaPredicted RBP16.99■□□□□ 0.31
PDGFRB-202ENST00000517488 PARK7Q99497 189 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms