RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 MYO19Q96H55 970 aa1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 DDRGK1Q96HY6 314 aa1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 ZKSCAN3Q9BRR0 538 aa1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 TRIM56Q9BRZ2 755 aaKnown RBP1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 KDM4CQ9H3R0 1056 aa1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 USP40Q9NVE5 1235 aa1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 GTF2IRD1Q9UHL9 959 aa1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 TMEM59LQ9UK28 342 aa1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 YBX2Q9Y2T7 364 aaKnown RBP1.71□□□□□ -2.14
RNU6-557P-201ENST00000516842 PALM3A6NDB9 673 aaPredicted RBP1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 GNAT3A8MTJ3 354 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 WASH4PA8MWX3 477 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 IGF2BP3O00425 579 aaKnown RBP eCLIP1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 IRS4O14654 1257 aaPredicted RBP1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 N4BP3O15049 544 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 LZTS3O60299 673 aaPredicted RBP1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 NEFMP07197 916 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 ITGB6P18564 788 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 ATP1A2P50993 1020 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 PDE3AQ14432 1141 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 COX20Q5RI15 118 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 SIRT2Q8IXJ6 389 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 SIX5Q8N196 739 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 LARGE2Q8N3Y3 721 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 C1orf127Q8N9H9 656 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 UBE2FQ969M7 185 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 CCDC120Q96HB5 630 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 PCMTD1Q96MG8 357 aaPredicted RBP1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 OSMRQ99650 979 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 SPATA25Q9BR10 227 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 OBSCNQ5VST9 7968 aa1.7□□□□□ -2.14
RNU6-557P-201ENST00000516842 FAM155AB1AL88 458 aaPredicted RBP1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 EOMESO95936 686 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 CYP11A1P05108 521 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 SDHBP21912 280 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 IGFBP4P22692 258 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 CDR1P51861 262 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 PTK7Q13308 1070 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 KRTAP15-1Q3LI76 137 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 IGFL4Q6B9Z1 124 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 DPY19L2P1Q6NXN4 242 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 UBE3DQ7Z6J8 389 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 BANK1Q8NDB2 785 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 GPR152Q8TDT2 470 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 PIK3R5Q8WYR1 880 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 DVL3Q92997 716 aaPredicted RBP1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 ISL2Q96A47 359 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 CEP89Q96ST8 783 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 ZC3H12CQ9C0D7 883 aaKnown RBP1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 SIRT5Q9NXA8 310 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 PCOLCE2Q9UKZ9 415 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 TACC3Q9Y6A5 838 aa1.69□□□□□ -2.14
RNU6-557P-201ENST00000516842 CYSRT1A8MQ03 144 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 EFEMP2O95967 443 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 ESR1P03372 595 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 CES1P23141 567 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 VIPR1P32241 457 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 NCKAP1LP55160 1127 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 IGDCC3Q8IVU1 814 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 PHF6Q8IWS0 365 aaKnown RBP eCLIP1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 CORO1BQ9BR76 489 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 SAP130Q9H0E3 1048 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 ELP3Q9H9T3 547 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 SSU72Q9NP77 194 aaKnown RBP1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 PRDM10Q9NQV6 1147 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 ZSWIM5Q9P217 1185 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 ST14Q9Y5Y6 855 aa1.68□□□□□ -2.14
RNU6-557P-201ENST00000516842 USP17L3A6NCW0 530 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 USP17L4A6NCW7 530 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 NPIPB8E9PQR5 432 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 ABL2P42684 1182 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 FGD1P98174 961 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 PCDH1Q08174 1060 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 ADGRF1Q5T601 910 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 USP17L2Q6R6M4 530 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 USP17L1Q7RTZ2 530 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 CHST13Q8NET6 341 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 MZB1Q8WU39 189 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 SHISA4Q96DD7 197 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 SAMD11Q96NU1 681 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 CRAMP1Q96RY5 1269 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 ATXN3LQ9H3M9 355 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 CCDC86Q9H6F5 360 aaKnown RBP1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 GDPD2Q9HCC8 539 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 LATS2Q9NRM7 1088 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 MKRN1Q9UHC7 482 aaKnown RBP1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 GPR160Q9UJ42 338 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 TSC22D4Q9Y3Q8 395 aa1.67□□□□□ -2.14
RNU6-557P-201ENST00000516842 WDR33Q9C0J8 1336 aaKnown RBP1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 ZNF862O60290 1169 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 ZGLP1P0C6A0 271 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 SEC13P55735 322 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 PLCB3Q01970 1234 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 ID3Q02535 119 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 PALM2Q8IXS6 379 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 NFATC2IPQ8NCF5 419 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 KISS1RQ969F8 398 aaPredicted RBP1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 VTI1AQ96AJ9 217 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 FOXQ1Q9C009 403 aa1.66□□□□□ -2.14
RNU6-557P-201ENST00000516842 CHRDQ9H2X0 955 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms