RNA–Protein interactions for RNA: ENST00000516520.1

SCARNA16.2-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 172 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.2-201ENST00000516520 PAPLNO95428 1278 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 LDHBP07195 334 aaKnown RBP4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 P4HBP07237 508 aaKnown RBP4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 CELA3AP09093 270 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ITIH2P19823 946 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 NTF4P34130 210 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 OGFOD2Q6N063 350 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 MPRIPQ6WCQ1 1025 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ATG4DQ86TL0 474 aaPredicted RBP4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 C12orf40Q86WS4 652 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 POU5F2Q8N7G0 328 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 PI4K2BQ8TCG2 481 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ZNF507Q8TCN5 953 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ASB11Q8WXH4 323 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 SETDB2Q96T68 719 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 TRAIPQ9BWF2 469 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 WWC3Q9ULE0 1092 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 TTF2Q9UNY4 1162 aaKnown RBP4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 U3KQE9 123 aa4.89□□□□□ -1.63
SCARNA16.2-201ENST00000516520 EIF4BP23588 611 aaKnown RBP4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 GNA15P30679 374 aa4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 CLCN7P51798 805 aa4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ARMCX6Q7L4S7 300 aa4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 HDXQ7Z353 690 aa4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 HEXIM2Q96MH2 286 aaKnown RBP4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 PRDM5Q9NQX1 630 aaPredicted RBP4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 MBNL3Q9NUK0 354 aaKnown RBP4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 PLAGL2Q9UPG8 496 aa4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 MAPK8IP1Q9UQF2 711 aa4.88□□□□□ -1.63
SCARNA16.2-201ENST00000516520 PRAMEF27A3QJZ7 478 aa4.87□□□□□ -1.63
SCARNA16.2-201ENST00000516520 PRPF40AO75400 957 aaKnown RBP4.87□□□□□ -1.63
SCARNA16.2-201ENST00000516520 RNASE1P07998 156 aaKnown RBP4.87□□□□□ -1.63
SCARNA16.2-201ENST00000516520 LMNB1P20700 586 aa4.87□□□□□ -1.63
SCARNA16.2-201ENST00000516520 SLC23A3Q6PIS1 610 aa4.87□□□□□ -1.63
SCARNA16.2-201ENST00000516520 FAM214BQ7L5A3 538 aa4.87□□□□□ -1.63
SCARNA16.2-201ENST00000516520 FOXQ1Q9C009 403 aa4.87□□□□□ -1.63
SCARNA16.2-201ENST00000516520 SNCAIPQ9Y6H5 919 aa4.87□□□□□ -1.63
SCARNA16.2-201ENST00000516520 CAP2P40123 477 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 CD96P40200 585 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 RPS26P62854 115 aaKnown RBP4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 IKZF1Q13422 519 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 RASIP1Q5U651 963 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 TTBK2Q6IQ55 1244 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ZNF746Q6NUN9 644 aaPredicted RBP4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 LRFN4Q6PJG9 635 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 CYFIP1Q7L576 1253 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 UBE3DQ7Z6J8 389 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 SPACA3Q8IXA5 215 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 LRRN4CLQ8ND94 238 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 FAM168AQ92567 244 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 GAL3ST3Q96A11 431 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 WNT10AQ9GZT5 417 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ADAMTS6Q9UKP5 1117 aa4.86□□□□□ -1.63
SCARNA16.2-201ENST00000516520 EOMESO95936 686 aa4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ETF1P62495 437 aaKnown RBP4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 INPP5AQ14642 412 aa4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 CCDC85BQ15834 202 aaPredicted RBP4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 WIPI1Q5MNZ9 446 aaPredicted RBP4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 C22orf34Q6ZV56 151 aa4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 MFSD2AQ8NA29 543 aa4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 FLAD1Q8NFF5 587 aa4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 PLPPR2Q96GM1 343 aa4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 TACC3Q9Y6A5 838 aa4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 AK5Q9Y6K8 562 aa4.85□□□□□ -1.63
SCARNA16.2-201ENST00000516520 PITPNM2Q9BZ72 1349 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 FAM155AB1AL88 458 aaPredicted RBP4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 C8AP07357 584 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 ZP2Q05996 745 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 NKPD1Q17RQ9 610 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 SFRP5Q5T4F7 317 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 DIEXFQ68CQ4 756 aaKnown RBP4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 HID1Q8IV36 788 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 TMEM40Q8WWA1 233 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 COX4I2Q96KJ9 171 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 MIPEPQ99797 713 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 LMCD1Q9NZU5 365 aa4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 TPX2Q9ULW0 747 aaKnown RBP4.84□□□□□ -1.63
SCARNA16.2-201ENST00000516520 CARMIL2Q6F5E8 1435 aa4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 SLITRK5O94991 958 aa4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 ZNF865P0CJ78 1059 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 RLBP1P12271 317 aa4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PTPN11Q06124 597 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 FZD5Q13467 585 aa4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 SLBPQ14493 270 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 EAPPQ56P03 285 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 MFSD4AQ8N468 514 aa4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 KRTAP9-9Q9BYP9 154 aa4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 FBRSQ9HAH7 460 aa4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.83□□□□□ -1.64
SCARNA16.2-201ENST00000516520 FARP2O94887 1054 aaPredicted RBP4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CST3P01034 146 aaPredicted RBP4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 CYP7A1P22680 504 aa4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 LIG3P49916 1009 aa4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 AGMOQ6ZNB7 445 aa4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 SND1Q7KZF4 910 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 DUSP9Q99956 384 aaKnown RBP4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 MIR1-1HGQ9H1L0 117 aa4.82□□□□□ -1.64
SCARNA16.2-201ENST00000516520 FAM53CQ9NYF3 392 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms