RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 FAM196BA6NMK8 535 aa18.01■□□□□ 0.47
HMGCLL1-209ENST00000515546 CXCL11O14625 94 aa18.01■□□□□ 0.47
HMGCLL1-209ENST00000515546 EDC3Q96F86 508 aaKnown RBP18.01■□□□□ 0.47
HMGCLL1-209ENST00000515546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.01■□□□□ 0.47
HMGCLL1-209ENST00000515546 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
HMGCLL1-209ENST00000515546 PI4KBQ9UBF8 816 aa18.01■□□□□ 0.47
HMGCLL1-209ENST00000515546 TAF1CQ15572 869 aaPredicted RBP18■□□□□ 0.47
HMGCLL1-209ENST00000515546 PKN2Q16513 984 aaKnown RBP18■□□□□ 0.47
HMGCLL1-209ENST00000515546 SLC9C2Q5TAH2 1124 aa18■□□□□ 0.47
HMGCLL1-209ENST00000515546 ANKRD23Q86SG2 305 aa18■□□□□ 0.47
HMGCLL1-209ENST00000515546 BOLA2Q9H3K6 86 aa18■□□□□ 0.47
HMGCLL1-209ENST00000515546 DNAJC18Q9H819 358 aa18■□□□□ 0.47
HMGCLL1-209ENST00000515546 AFG3L2Q9Y4W6 797 aa18■□□□□ 0.47
HMGCLL1-209ENST00000515546 A0A0G2JLL6 359 aaPredicted RBP17.99■□□□□ 0.47
HMGCLL1-209ENST00000515546 RRP1BQ14684 758 aaKnown RBP17.99■□□□□ 0.47
HMGCLL1-209ENST00000515546 PRRT2Q7Z6L0 340 aaPredicted RBP17.99■□□□□ 0.47
HMGCLL1-209ENST00000515546 ZFYVE28Q9HCC9 887 aa17.99■□□□□ 0.47
HMGCLL1-209ENST00000515546 ECHDC1Q9NTX5 307 aa17.99■□□□□ 0.47
HMGCLL1-209ENST00000515546 PALD1Q9ULE6 856 aa17.99■□□□□ 0.47
HMGCLL1-209ENST00000515546 ZHX2Q9Y6X8 837 aa17.99■□□□□ 0.47
HMGCLL1-209ENST00000515546 PTPRFP10586 1907 aa17.99■□□□□ 0.47
HMGCLL1-209ENST00000515546 ADGRA2Q96PE1 1338 aa17.98■□□□□ 0.47
HMGCLL1-209ENST00000515546 ZNF532Q9HCE3 1301 aa17.98■□□□□ 0.47
HMGCLL1-209ENST00000515546 ATAD5Q96QE3 1844 aa17.98■□□□□ 0.47
HMGCLL1-209ENST00000515546 CAP2P40123 477 aa17.98■□□□□ 0.47
HMGCLL1-209ENST00000515546 BCL11AQ9H165 835 aa17.98■□□□□ 0.47
HMGCLL1-209ENST00000515546 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.98■□□□□ 0.47
HMGCLL1-209ENST00000515546 NAV1Q8NEY1 1877 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 LOC285556D6RIA3 1793 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 TLR2O60603 784 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 ADD2P35612 726 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 SP3Q02447 781 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 GPAT2Q6NUI2 795 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 FOXP4Q8IVH2 680 aaPredicted RBP17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 ERO1AQ96HE7 468 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 EHD4Q9H223 541 aa17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 SAP30BPQ9UHR5 308 aaKnown RBP17.97■□□□□ 0.47
HMGCLL1-209ENST00000515546 PDHXO00330 501 aa17.96■□□□□ 0.47
HMGCLL1-209ENST00000515546 HLA-DOAP06340 250 aa17.96■□□□□ 0.47
HMGCLL1-209ENST00000515546 USP5P45974 858 aa17.96■□□□□ 0.47
HMGCLL1-209ENST00000515546 AAMPQ13685 434 aa17.96■□□□□ 0.47
HMGCLL1-209ENST00000515546 TBC1D2Q9BYX2 928 aa17.96■□□□□ 0.47
HMGCLL1-209ENST00000515546 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.96■□□□□ 0.47
HMGCLL1-209ENST00000515546 MYH1P12882 1939 aa17.96■□□□□ 0.47
HMGCLL1-209ENST00000515546 CAP1Q01518 475 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 HDAC1Q13547 482 aaPredicted RBP17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 UBE3CQ15386 1083 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 FBXO46Q6PJ61 603 aaPredicted RBP17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 FASTKD5Q7L8L6 764 aaKnown RBP17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 OTOP1Q7RTM1 612 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 CCDC84Q86UT8 332 aaPredicted RBP17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 LCORLQ8N3X6 602 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 CD99L2Q8TCZ2 262 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 GPATCH3Q96I76 525 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 CRNKL1Q9BZJ0 848 aaKnown RBP17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 HPS5Q9UPZ3 1129 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 SLC45A1Q9Y2W3 748 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 MYH7P12883 1935 aa17.95■□□□□ 0.46
HMGCLL1-209ENST00000515546 TRIM75PA6NK02 468 aa17.94■□□□□ 0.46
HMGCLL1-209ENST00000515546 CCDC85CA6NKD9 419 aa17.94■□□□□ 0.46
HMGCLL1-209ENST00000515546 JAG1P78504 1218 aa17.94■□□□□ 0.46
HMGCLL1-209ENST00000515546 CRACR2BQ8N4Y2 399 aaPredicted RBP17.94■□□□□ 0.46
HMGCLL1-209ENST00000515546 GINM1Q9NU53 330 aa17.94■□□□□ 0.46
HMGCLL1-209ENST00000515546 ASNSP08243 561 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 SLFNL1Q499Z3 407 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 TSHZ3Q63HK5 1081 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 TATDN1Q6P1N9 297 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 C17orf99Q6UX52 265 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 ZNF280CQ8ND82 737 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 PARK7Q99497 189 aaKnown RBP17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 WDR18Q9BV38 432 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 TRIM34Q9BYJ4 488 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 SERPINB13Q9UIV8 391 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 TRIM17Q9Y577 477 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 SALL3Q9BXA9 1300 aa17.93■□□□□ 0.46
HMGCLL1-209ENST00000515546 USP17L5A8MUK1 530 aa17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 CHGBP05060 677 aa17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 SHROOM1Q2M3G4 852 aaPredicted RBP17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 SLC4A8Q2Y0W8 1093 aa17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 ZSCAN25Q6NSZ9 544 aa17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 TTC6Q86TZ1 520 aa17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 ZBTB21Q9ULJ3 1066 aa17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 AGTPBP1Q9UPW5 1226 aa17.92■□□□□ 0.46
HMGCLL1-209ENST00000515546 MBD4O95243 580 aa17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 LACTBP83111 547 aaPredicted RBP17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 GABPAQ06546 454 aa17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 SPP2Q13103 211 aa17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 SH3D19Q5HYK7 790 aa17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 GADL1Q6ZQY3 521 aa17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 KBTBD3Q8NAB2 608 aa17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 PROCA1Q8NCQ7 364 aaPredicted RBP17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 PI4K2BQ8TCG2 481 aa17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 OTUD7AQ8TE49 926 aaPredicted RBP17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 EFCC1Q9HA90 598 aa17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 DCP1AQ9NPI6 582 aaPredicted RBP17.91■□□□□ 0.46
HMGCLL1-209ENST00000515546 GDF11O95390 407 aa17.9■□□□□ 0.46
HMGCLL1-209ENST00000515546 CYP2C8P10632 490 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms