RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 SLC4A8Q2Y0W8 1093 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 RRP12Q5JTH9 1297 aaKnown RBP23.24■■□□□ 1.31
SSBP2-218ENST00000514493 SH2B1Q9NRF2 756 aaPredicted RBP23.24■■□□□ 1.31
SSBP2-218ENST00000514493 TOMM22Q9NS69 142 aa23.24■■□□□ 1.31
SSBP2-218ENST00000514493 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
SSBP2-218ENST00000514493 PLCD1P51178 756 aa23.23■■□□□ 1.31
SSBP2-218ENST00000514493 ZNF280AP59817 542 aaPredicted RBP23.23■■□□□ 1.31
SSBP2-218ENST00000514493 PDE4BQ07343 736 aa23.23■■□□□ 1.31
SSBP2-218ENST00000514493 ESR2Q92731 530 aa23.23■■□□□ 1.31
SSBP2-218ENST00000514493 DPF2Q92785 391 aa23.23■■□□□ 1.31
SSBP2-218ENST00000514493 BRF1Q92994 677 aa23.23■■□□□ 1.31
SSBP2-218ENST00000514493 LARP6Q9BRS8 491 aaKnown RBP23.23■■□□□ 1.31
SSBP2-218ENST00000514493 TDRD3Q9H7E2 651 aaKnown RBP23.23■■□□□ 1.31
SSBP2-218ENST00000514493 RNF181Q9P0P0 153 aa23.23■■□□□ 1.31
SSBP2-218ENST00000514493 TPCN1Q9ULQ1 816 aa23.23■■□□□ 1.31
SSBP2-218ENST00000514493 LARGE1O95461 756 aa23.22■■□□□ 1.31
SSBP2-218ENST00000514493 NT5C2P49902 561 aa23.22■■□□□ 1.31
SSBP2-218ENST00000514493 GMPSP49915 693 aaPredicted RBP23.22■■□□□ 1.31
SSBP2-218ENST00000514493 GJA3Q9Y6H8 435 aa23.22■■□□□ 1.31
SSBP2-218ENST00000514493 CACNB3P54284 484 aa23.22■■□□□ 1.31
SSBP2-218ENST00000514493 ZBED3Q96IU2 234 aaPredicted RBP23.22■■□□□ 1.31
SSBP2-218ENST00000514493 TMEM87BQ96K49 555 aa23.22■■□□□ 1.31
SSBP2-218ENST00000514493 MTA3Q9BTC8 594 aa23.22■■□□□ 1.31
SSBP2-218ENST00000514493 ZSWIM5Q9P217 1185 aa23.22■■□□□ 1.31
SSBP2-218ENST00000514493 FAM198AQ9UFP1 575 aa23.22■■□□□ 1.31
SSBP2-218ENST00000514493 MYOZ2Q9NPC6 264 aa23.21■■□□□ 1.31
SSBP2-218ENST00000514493 TMOD2Q9NZR1 351 aa23.21■■□□□ 1.31
SSBP2-218ENST00000514493 SHTN1A0MZ66 631 aa23.2■■□□□ 1.3
SSBP2-218ENST00000514493 SH2B2O14492 632 aaPredicted RBP23.2■■□□□ 1.3
SSBP2-218ENST00000514493 PRDM1O75626 825 aa23.2■■□□□ 1.3
SSBP2-218ENST00000514493 ME3Q16798 604 aa23.2■■□□□ 1.3
SSBP2-218ENST00000514493 C16orf86Q6ZW13 317 aa23.2■■□□□ 1.3
SSBP2-218ENST00000514493 TTC6Q86TZ1 520 aa23.2■■□□□ 1.3
SSBP2-218ENST00000514493 DYNLL2Q96FJ2 89 aa23.2■■□□□ 1.3
SSBP2-218ENST00000514493 SPDYE2Q495Y8 402 aa23.19■■□□□ 1.3
SSBP2-218ENST00000514493 MICALL2Q8IY33 904 aa23.19■■□□□ 1.3
SSBP2-218ENST00000514493 GPC2Q8N158 579 aa23.19■■□□□ 1.3
SSBP2-218ENST00000514493 ANGEL1Q9UNK9 670 aaKnown RBP23.19■■□□□ 1.3
SSBP2-218ENST00000514493 EVCP57679 992 aa23.19■■□□□ 1.3
SSBP2-218ENST00000514493 ZNF287Q9HBT7 754 aa23.19■■□□□ 1.3
SSBP2-218ENST00000514493 GPHNQ9NQX3 736 aaPredicted RBP23.19■■□□□ 1.3
SSBP2-218ENST00000514493 ZNF70Q9UC06 446 aaPredicted RBP23.19■■□□□ 1.3
SSBP2-218ENST00000514493 ATRNL1Q5VV63 1379 aa23.19■■□□□ 1.3
SSBP2-218ENST00000514493 ENTPD3O75355 529 aa23.18■■□□□ 1.3
SSBP2-218ENST00000514493 HLA-DOAP06340 250 aa23.18■■□□□ 1.3
SSBP2-218ENST00000514493 APOBRQ0VD83 1088 aa23.18■■□□□ 1.3
SSBP2-218ENST00000514493 SART3Q15020 963 aaKnown RBP23.18■■□□□ 1.3
SSBP2-218ENST00000514493 DHX36Q9H2U1 1008 aaKnown RBP23.18■■□□□ 1.3
SSBP2-218ENST00000514493 WNT10BO00744 389 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 RANBP6O60518 1105 aaKnown RBP23.17■■□□□ 1.3
SSBP2-218ENST00000514493 GABPAQ06546 454 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 SLC44A5Q8NCS7 719 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 IGDCC4Q8TDY8 1250 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.17■■□□□ 1.3
SSBP2-218ENST00000514493 GREB1LQ9C091 1923 aaPredicted RBP23.17■■□□□ 1.3
SSBP2-218ENST00000514493 CLRN2A0PK11 232 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 MYO1BO43795 1136 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 ST3GAL1Q11201 340 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 TCP10Q12799 353 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 RAB3GAP1Q15042 981 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 TMEM67Q5HYA8 995 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 FKBP1CQ5VVH2 108 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 ZFPM1Q8IX07 1006 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 UBAC1Q9BSL1 405 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 EHD4Q9H223 541 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 LY9Q9HBG7 655 aa23.17■■□□□ 1.3
SSBP2-218ENST00000514493 CNOT7Q9UIV1 285 aaKnown RBP23.17■■□□□ 1.3
SSBP2-218ENST00000514493 IFIT3O14879 490 aaKnown RBP23.16■■□□□ 1.3
SSBP2-218ENST00000514493 LIFRP42702 1097 aa23.16■■□□□ 1.3
SSBP2-218ENST00000514493 CDK8P49336 464 aa23.16■■□□□ 1.3
SSBP2-218ENST00000514493 NUCB2P80303 420 aa23.16■■□□□ 1.3
SSBP2-218ENST00000514493 MKNK2Q9HBH9 465 aa23.16■■□□□ 1.3
SSBP2-218ENST00000514493 SGMS1Q86VZ5 419 aa23.15■■□□□ 1.3
SSBP2-218ENST00000514493 IQCA1Q86XH1 822 aa23.15■■□□□ 1.3
SSBP2-218ENST00000514493 CCDC83Q8IWF9 413 aa23.15■■□□□ 1.3
SSBP2-218ENST00000514493 GTF3C6Q969F1 213 aa23.15■■□□□ 1.3
SSBP2-218ENST00000514493 ZNF274Q96GC6 653 aaPredicted RBP23.15■■□□□ 1.3
SSBP2-218ENST00000514493 SERPINB13Q9UIV8 391 aa23.15■■□□□ 1.3
SSBP2-218ENST00000514493 TNKSO95271 1327 aa23.15■■□□□ 1.3
SSBP2-218ENST00000514493 ERICH2A1L162 156 aa23.14■■□□□ 1.3
SSBP2-218ENST00000514493 RASA1P20936 1047 aa23.14■■□□□ 1.3
SSBP2-218ENST00000514493 NFKBIBQ15653 356 aa23.14■■□□□ 1.3
SSBP2-218ENST00000514493 NBPF9Q3BBW0 867 aa23.14■■□□□ 1.3
SSBP2-218ENST00000514493 SH3BP5LQ7L8J4 393 aa23.14■■□□□ 1.3
SSBP2-218ENST00000514493 SWAP70Q9UH65 585 aa23.14■■□□□ 1.3
SSBP2-218ENST00000514493 KLF18A0A0U1RQI7 1052 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 DDTLA6NHG4 134 aaPredicted RBP23.14■■□□□ 1.29
SSBP2-218ENST00000514493 TSPY2A6NKD2 308 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 PFKFB2O60825 505 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 EGFRP00533 1210 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 WTAPQ15007 396 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 NECAB1Q8N987 351 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 ZSCAN10Q96SZ4 725 aaPredicted RBP23.14■■□□□ 1.29
SSBP2-218ENST00000514493 ZKSCAN3Q9BRR0 538 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 GPRC5DQ9NZD1 345 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 TAOK2Q9UL54 1235 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 BRPF3Q9ULD4 1205 aa23.14■■□□□ 1.29
SSBP2-218ENST00000514493 CNTNAP1P78357 1384 aa23.13■■□□□ 1.29
SSBP2-218ENST00000514493 TCP10L2B9ZVM9 353 aa23.13■■□□□ 1.29
SSBP2-218ENST00000514493 STK3Q13188 491 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms